RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 CCR6P51684 374 aa13.93□□□□□ -0.18
LINC00839-202ENST00000429940 EEF1A1P68104 462 aaKnown RBP13.93□□□□□ -0.18
LINC00839-202ENST00000429940 BTN3A2P78410 334 aa13.93□□□□□ -0.18
LINC00839-202ENST00000429940 DGCR2P98153 550 aa13.93□□□□□ -0.18
LINC00839-202ENST00000429940 RGS1Q08116 209 aa13.93□□□□□ -0.18
LINC00839-202ENST00000429940 GPR68Q15743 365 aa13.93□□□□□ -0.18
LINC00839-202ENST00000429940 COL28A1Q2UY09 1125 aa13.93□□□□□ -0.18
LINC00839-202ENST00000429940 ACSM3Q53FZ2 586 aa13.93□□□□□ -0.18
LINC00839-202ENST00000429940 EIPR1Q53HC9 387 aa13.93□□□□□ -0.18
LINC00839-202ENST00000429940 FCRLBQ6BAA4 426 aa13.93□□□□□ -0.18
LINC00839-202ENST00000429940 SIX5Q8N196 739 aa13.93□□□□□ -0.18
LINC00839-202ENST00000429940 OR52E1Q8NGJ3 308 aa13.93□□□□□ -0.18
LINC00839-202ENST00000429940 SMAP2Q8WU79 429 aaPredicted RBP13.93□□□□□ -0.18
LINC00839-202ENST00000429940 TMEM239Q8WW34 195 aa13.93□□□□□ -0.18
LINC00839-202ENST00000429940 MARVELD3Q96A59 401 aa13.93□□□□□ -0.18
LINC00839-202ENST00000429940 RAB7BQ96AH8 199 aa13.93□□□□□ -0.18
LINC00839-202ENST00000429940 DACT3Q96B18 629 aaPredicted RBP13.93□□□□□ -0.18
LINC00839-202ENST00000429940 ERVMER34-1Q9H9K5 563 aa13.93□□□□□ -0.18
LINC00839-202ENST00000429940 MBNL1Q9NR56 388 aaKnown RBP13.93□□□□□ -0.18
LINC00839-202ENST00000429940 CMC2Q9NRP2 79 aa13.93□□□□□ -0.18
LINC00839-202ENST00000429940 COPZ2Q9P299 210 aa13.93□□□□□ -0.18
LINC00839-202ENST00000429940 MRPS7Q9Y2R9 242 aaKnown RBP13.93□□□□□ -0.18
LINC00839-202ENST00000429940 OR52A4PA6NMU1 304 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 SC5DO75845 299 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 UBL3O95164 117 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 PCDH8O95206 1070 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 PEPDP12955 493 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 MMP15P51511 669 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 OR12D2P58182 307 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 PITPNAQ00169 270 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 FOXK2Q01167 660 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 ARHGAP11BQ3KRB8 267 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 CCNJQ5T5M9 372 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 GET4Q7L5D6 327 aaPredicted RBP13.92□□□□□ -0.18
LINC00839-202ENST00000429940 ADAMTS14Q8WXS8 1223 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 RSPRY1Q96DX4 576 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 PGLYRP3Q96LB9 341 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 SMAD5Q99717 465 aaKnown RBP13.92□□□□□ -0.18
LINC00839-202ENST00000429940 TEX101Q9BY14 249 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 WDR26Q9H7D7 661 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 HEXA-AS1Q9H8Q6 139 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 LYARQ9NX58 379 aaKnown RBP13.92□□□□□ -0.18
LINC00839-202ENST00000429940 CLDND1Q9NY35 253 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 TMEM5Q9Y2B1 443 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 AUP1Q9Y679 476 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 TBC1D3KA0A087X1G2 549 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 CDHR4A6H8M9 788 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 TBC1D3BA6NDS4 549 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 TBC1D3FA6NER0 549 aaPredicted RBP13.92□□□□□ -0.18
LINC00839-202ENST00000429940 RCBTB2O95199 551 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 SBK2P0C263 348 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 GKN3PP0CG01 181 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 HTR2AP28223 471 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 ZNF85Q03923 595 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 DUSP5Q16690 384 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 GSG1Q2KHT4 349 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 TBC1D3GQ6DHY5 549 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 THSD4Q6ZMP0 1018 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 IDO2Q6ZQW0 420 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 MTSS1LQ765P7 747 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 LRRC25Q8N386 305 aaPredicted RBP13.92□□□□□ -0.18
LINC00839-202ENST00000429940 SLC44A3Q8N4M1 653 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 OR6C4Q8NGE1 309 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 OR13C5Q8NGS8 318 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 OR13C2Q8NGS9 318 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 GIMAP1Q8WWP7 306 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 SUSD6Q92537 303 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 ADGRL4Q9HBW9 690 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 SPHK1Q9NYA1 384 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 KCNN3Q9UGI6 736 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 NPFFR2Q9Y5X5 522 aa13.92□□□□□ -0.18
LINC00839-202ENST00000429940 OTOL1A6NHN0 477 aaPredicted RBP13.91□□□□□ -0.18
LINC00839-202ENST00000429940 B8ZZF3 427 aa13.91□□□□□ -0.18
LINC00839-202ENST00000429940 LRRN3E7EW58 273 aa13.91□□□□□ -0.18
LINC00839-202ENST00000429940 PRICKLE3O43900 615 aaPredicted RBP13.91□□□□□ -0.18
LINC00839-202ENST00000429940 PDGFAP04085 211 aa13.91□□□□□ -0.18
LINC00839-202ENST00000429940 H2AFB2P0C5Z0 115 aa13.91□□□□□ -0.18
LINC00839-202ENST00000429940 CLUP10909 449 aa13.91□□□□□ -0.18
LINC00839-202ENST00000429940 SNRPBP14678 240 aaKnown RBP13.91□□□□□ -0.18
LINC00839-202ENST00000429940 NOS3P29474 1203 aa13.91□□□□□ -0.18
LINC00839-202ENST00000429940 BMP8BP34820 402 aa13.91□□□□□ -0.18
LINC00839-202ENST00000429940 VIPR2P41587 438 aa13.91□□□□□ -0.18
LINC00839-202ENST00000429940 NRG3P56975 720 aa13.91□□□□□ -0.18
LINC00839-202ENST00000429940 DUSP8Q13202 625 aa13.91□□□□□ -0.18
LINC00839-202ENST00000429940 FGFBP1Q14512 234 aa13.91□□□□□ -0.18
LINC00839-202ENST00000429940 OR1Q1Q15612 314 aa13.91□□□□□ -0.18
LINC00839-202ENST00000429940 ST3GAL2Q16842 350 aa13.91□□□□□ -0.18
LINC00839-202ENST00000429940 HSD17B12Q53GQ0 312 aa13.91□□□□□ -0.18
LINC00839-202ENST00000429940 ASPGQ86U10 573 aa13.91□□□□□ -0.18
LINC00839-202ENST00000429940 RNF113BQ8IZP6 322 aaKnown RBP13.91□□□□□ -0.18
LINC00839-202ENST00000429940 MFSD9Q8NBP5 474 aa13.91□□□□□ -0.18
LINC00839-202ENST00000429940 BEST4Q8NFU0 473 aa13.91□□□□□ -0.18
LINC00839-202ENST00000429940 OR5J2Q8NH18 312 aa13.91□□□□□ -0.18
LINC00839-202ENST00000429940 SMPDL3BQ92485 455 aa13.91□□□□□ -0.18
LINC00839-202ENST00000429940 GHSRQ92847 366 aa13.91□□□□□ -0.18
LINC00839-202ENST00000429940 HGDQ93099 445 aa13.91□□□□□ -0.18
LINC00839-202ENST00000429940 MS4A3Q96HJ5 214 aa13.91□□□□□ -0.18
LINC00839-202ENST00000429940 LRRN3Q9H3W5 708 aa13.91□□□□□ -0.18
LINC00839-202ENST00000429940 ZNF576Q9H609 170 aa13.91□□□□□ -0.18
LINC00839-202ENST00000429940 UCKL1Q9NWZ5 548 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms