RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 AGKQ53H12 422 aa12.24□□□□□ -0.45
SNX3-204ENST00000426155 RPS26P11Q5JNZ5 115 aaPredicted RBP12.24□□□□□ -0.45
SNX3-204ENST00000426155 PAGE3Q5JUK9 113 aa12.24□□□□□ -0.45
SNX3-204ENST00000426155 VWA1Q6PCB0 445 aa12.24□□□□□ -0.45
SNX3-204ENST00000426155 MSANTD1Q6ZTZ1 278 aa12.24□□□□□ -0.45
SNX3-204ENST00000426155 LUZP2Q86TE4 346 aa12.24□□□□□ -0.45
SNX3-204ENST00000426155 ANKHD1Q8IWZ3 2542 aaKnown RBP12.24□□□□□ -0.45
SNX3-204ENST00000426155 MSRB3Q8IXL7 192 aa12.24□□□□□ -0.45
SNX3-204ENST00000426155 METTL25Q8N6Q8 603 aa12.24□□□□□ -0.45
SNX3-204ENST00000426155 ATP6V1C2Q8NEY4 427 aa12.24□□□□□ -0.45
SNX3-204ENST00000426155 OR5W2Q8NH69 310 aa12.24□□□□□ -0.45
SNX3-204ENST00000426155 OR10D3Q8NH80 312 aa12.24□□□□□ -0.45
SNX3-204ENST00000426155 RMND5AQ9H871 391 aa12.24□□□□□ -0.45
SNX3-204ENST00000426155 TPT1P8Q9HAU6 139 aa12.24□□□□□ -0.45
SNX3-204ENST00000426155 SLC52A3Q9NQ40 469 aa12.24□□□□□ -0.45
SNX3-204ENST00000426155 SLC25A37Q9NYZ2 338 aa12.24□□□□□ -0.45
SNX3-204ENST00000426155 SLAMF8Q9P0V8 285 aa12.24□□□□□ -0.45
SNX3-204ENST00000426155 PCDHB14Q9Y5E9 798 aa12.24□□□□□ -0.45
SNX3-204ENST00000426155 A0A0G2JND7 137 aa12.23□□□□□ -0.45
SNX3-204ENST00000426155 EIF4E2O60573 245 aaKnown RBP12.23□□□□□ -0.45
SNX3-204ENST00000426155 ADAM11O75078 769 aa12.23□□□□□ -0.45
SNX3-204ENST00000426155 KRT75O95678 551 aa12.23□□□□□ -0.45
SNX3-204ENST00000426155 BCHEP06276 602 aa12.23□□□□□ -0.45
SNX3-204ENST00000426155 NCF2P19878 526 aaPredicted RBP12.23□□□□□ -0.45
SNX3-204ENST00000426155 OPRM1P35372 400 aa12.23□□□□□ -0.45
SNX3-204ENST00000426155 PGM1P36871 562 aa12.23□□□□□ -0.45
SNX3-204ENST00000426155 SUMO3P55854 103 aaPredicted RBP12.23□□□□□ -0.45
SNX3-204ENST00000426155 RPS3AP61247 264 aaKnown RBP12.23□□□□□ -0.45
SNX3-204ENST00000426155 RAC1P63000 192 aa12.23□□□□□ -0.45
SNX3-204ENST00000426155 TLE4Q04727 773 aa12.23□□□□□ -0.45
SNX3-204ENST00000426155 SQLEQ14534 574 aa12.23□□□□□ -0.45
SNX3-204ENST00000426155 SGCBQ16585 318 aa12.23□□□□□ -0.45
SNX3-204ENST00000426155 CGB2Q6NT52 195 aa12.23□□□□□ -0.45
SNX3-204ENST00000426155 BLOC1S3Q6QNY0 202 aa12.23□□□□□ -0.45
SNX3-204ENST00000426155 EIF3MQ7L2H7 374 aaKnown RBP12.23□□□□□ -0.45
SNX3-204ENST00000426155 LILRA2Q8N149 483 aa12.23□□□□□ -0.45
SNX3-204ENST00000426155 C10orf111Q8N326 155 aa12.23□□□□□ -0.45
SNX3-204ENST00000426155 CNEP1R1Q8N9A8 125 aa12.23□□□□□ -0.45
SNX3-204ENST00000426155 FAM71CQ8NEG0 241 aa12.23□□□□□ -0.45
SNX3-204ENST00000426155 TOR1AIP2Q8NFQ8 470 aa12.23□□□□□ -0.45
SNX3-204ENST00000426155 SPDL1Q96EA4 605 aa12.23□□□□□ -0.45
SNX3-204ENST00000426155 TRNT1Q96Q11 434 aaKnown RBP12.23□□□□□ -0.45
SNX3-204ENST00000426155 SFXN3Q9BWM7 321 aa12.23□□□□□ -0.45
SNX3-204ENST00000426155 LAT2Q9GZY6 243 aa12.23□□□□□ -0.45
SNX3-204ENST00000426155 ZNF385DQ9H6B1 395 aa12.23□□□□□ -0.45
SNX3-204ENST00000426155 HHATLQ9HCP6 504 aa12.23□□□□□ -0.45
SNX3-204ENST00000426155 POLE3Q9NRF9 147 aa12.23□□□□□ -0.45
SNX3-204ENST00000426155 JKAMPQ9P055 326 aa12.23□□□□□ -0.45
SNX3-204ENST00000426155 CLEC4AQ9UMR7 237 aa12.23□□□□□ -0.45
SNX3-204ENST00000426155 ERICH4A6NGS2 130 aa12.22□□□□□ -0.45
SNX3-204ENST00000426155 SYT5O00445 386 aa12.22□□□□□ -0.45
SNX3-204ENST00000426155 AP3D1O14617 1153 aa12.22□□□□□ -0.45
SNX3-204ENST00000426155 NTN1O95631 604 aa12.22□□□□□ -0.45
SNX3-204ENST00000426155 IL18BPO95998 194 aa12.22□□□□□ -0.45
SNX3-204ENST00000426155 GUSBP08236 651 aa12.22□□□□□ -0.45
SNX3-204ENST00000426155 NR2F1P10589 423 aa12.22□□□□□ -0.45
SNX3-204ENST00000426155 ME2P23368 584 aa12.22□□□□□ -0.45
SNX3-204ENST00000426155 RYKP34925 604 aa12.22□□□□□ -0.45
SNX3-204ENST00000426155 EEFSECP57772 596 aaKnown RBP12.22□□□□□ -0.45
SNX3-204ENST00000426155 DSTNP60981 165 aa12.22□□□□□ -0.45
SNX3-204ENST00000426155 GUCY1A3Q02108 690 aa12.22□□□□□ -0.45
SNX3-204ENST00000426155 MYBPHQ13203 477 aa12.22□□□□□ -0.45
SNX3-204ENST00000426155 CBFBQ13951 182 aa12.22□□□□□ -0.45
SNX3-204ENST00000426155 HBMQ6B0K9 141 aa12.22□□□□□ -0.45
SNX3-204ENST00000426155 LRRC74BQ6ZQY2 392 aa12.22□□□□□ -0.45
SNX3-204ENST00000426155 ZZZ3Q8IYH5 903 aa12.22□□□□□ -0.45
SNX3-204ENST00000426155 OR2V1Q8NHB1 315 aa12.22□□□□□ -0.45
SNX3-204ENST00000426155 CNOT9Q92600 299 aaKnown RBP12.22□□□□□ -0.45
SNX3-204ENST00000426155 RNASE6Q93091 150 aaKnown RBP12.22□□□□□ -0.45
SNX3-204ENST00000426155 MAL2Q969L2 176 aa12.22□□□□□ -0.45
SNX3-204ENST00000426155 DNAJA3Q96EY1 480 aa12.22□□□□□ -0.45
SNX3-204ENST00000426155 TMEM19Q96HH6 336 aa12.22□□□□□ -0.45
SNX3-204ENST00000426155 KLHL15Q96M94 604 aa12.22□□□□□ -0.45
SNX3-204ENST00000426155 ZFP3Q96NJ6 502 aa12.22□□□□□ -0.45
SNX3-204ENST00000426155 SRXN1Q9BYN0 137 aa12.22□□□□□ -0.45
SNX3-204ENST00000426155 COQ10BQ9H8M1 238 aa12.22□□□□□ -0.45
SNX3-204ENST00000426155 RNF122Q9H9V4 155 aa12.22□□□□□ -0.45
SNX3-204ENST00000426155 FGFR1OP2Q9NVK5 253 aa12.22□□□□□ -0.45
SNX3-204ENST00000426155 P2RX2Q9UBL9 471 aa12.22□□□□□ -0.45
SNX3-204ENST00000426155 LIPT1Q9Y234 373 aa12.22□□□□□ -0.45
SNX3-204ENST00000426155 ZNF175Q9Y473 711 aa12.22□□□□□ -0.45
SNX3-204ENST00000426155 GPC6Q9Y625 555 aaPredicted RBP12.22□□□□□ -0.45
SNX3-204ENST00000426155 MPDZO75970 2070 aa12.22□□□□□ -0.45
SNX3-204ENST00000426155 DSPPQ9NZW4 1301 aa12.21□□□□□ -0.45
SNX3-204ENST00000426155 A0A096LPI6 279 aa12.21□□□□□ -0.45
SNX3-204ENST00000426155 AGAP5A6NIR3 686 aa12.21□□□□□ -0.45
SNX3-204ENST00000426155 SMNDC1O75940 238 aaKnown RBP eCLIP12.21□□□□□ -0.45
SNX3-204ENST00000426155 RPS4Y1P22090 263 aaKnown RBP12.21□□□□□ -0.45
SNX3-204ENST00000426155 ELK4P28324 431 aa12.21□□□□□ -0.45
SNX3-204ENST00000426155 CPOXP36551 454 aa12.21□□□□□ -0.45
SNX3-204ENST00000426155 EIF1P41567 113 aaKnown RBP12.21□□□□□ -0.45
SNX3-204ENST00000426155 KIR2DL2P43627 348 aaPredicted RBP12.21□□□□□ -0.45
SNX3-204ENST00000426155 CPA2P48052 419 aa12.21□□□□□ -0.45
SNX3-204ENST00000426155 ANXA11P50995 505 aaKnown RBP12.21□□□□□ -0.45
SNX3-204ENST00000426155 ATP4BP51164 291 aa12.21□□□□□ -0.45
SNX3-204ENST00000426155 KCNJ10P78508 379 aa12.21□□□□□ -0.45
SNX3-204ENST00000426155 FBXL19-AS1Q494R0 122 aa12.21□□□□□ -0.45
SNX3-204ENST00000426155 HSP90B2PQ58FF3 399 aa12.21□□□□□ -0.45
SNX3-204ENST00000426155 AP1ARQ63HQ0 302 aa12.21□□□□□ -0.45
SNX3-204ENST00000426155 ESPNLQ6ZVH7 1005 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms