RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 BCAS1O75363 584 aaPredicted RBP14.23□□□□□ -0.13
BRAT1-202ENST00000421712 SERPINB7O75635 380 aa14.23□□□□□ -0.13
BRAT1-202ENST00000421712 THBS1P07996 1170 aa14.23□□□□□ -0.13
BRAT1-202ENST00000421712 PABPC4LP0CB38 370 aaKnown RBP14.23□□□□□ -0.13
BRAT1-202ENST00000421712 GP1BBP13224 206 aa14.23□□□□□ -0.13
BRAT1-202ENST00000421712 ETS2P15036 469 aa14.23□□□□□ -0.13
BRAT1-202ENST00000421712 NUDT2P50583 147 aa14.23□□□□□ -0.13
BRAT1-202ENST00000421712 NUP107P57740 925 aa14.23□□□□□ -0.13
BRAT1-202ENST00000421712 EEFSECP57772 596 aaKnown RBP14.23□□□□□ -0.13
BRAT1-202ENST00000421712 RBBP4Q09028 425 aa14.23□□□□□ -0.13
BRAT1-202ENST00000421712 ADRM1Q16186 407 aa14.23□□□□□ -0.13
BRAT1-202ENST00000421712 BCL2A1Q16548 175 aa14.23□□□□□ -0.13
BRAT1-202ENST00000421712 POMZP3Q6PJE2 187 aa14.23□□□□□ -0.13
BRAT1-202ENST00000421712 ZNF836Q6ZNA1 936 aa14.23□□□□□ -0.13
BRAT1-202ENST00000421712 MRGPRGQ86SM5 289 aa14.23□□□□□ -0.13
BRAT1-202ENST00000421712 SERPINA11Q86U17 422 aa14.23□□□□□ -0.13
BRAT1-202ENST00000421712 CCDC197Q8NCU1 140 aa14.23□□□□□ -0.13
BRAT1-202ENST00000421712 PHF10Q8WUB8 498 aaKnown RBP14.23□□□□□ -0.13
BRAT1-202ENST00000421712 DMRTA2Q96SC8 542 aa14.23□□□□□ -0.13
BRAT1-202ENST00000421712 TUBA1CQ9BQE3 449 aa14.23□□□□□ -0.13
BRAT1-202ENST00000421712 TTYH2Q9BSA4 534 aa14.23□□□□□ -0.13
BRAT1-202ENST00000421712 TMEM185BQ9H7F4 350 aa14.23□□□□□ -0.13
BRAT1-202ENST00000421712 EXOSC3Q9NQT5 275 aaKnown RBP14.23□□□□□ -0.13
BRAT1-202ENST00000421712 SLC13A4Q9UKG4 626 aa14.23□□□□□ -0.13
BRAT1-202ENST00000421712 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 C7orf72A4D263 438 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 CFAP73A6NFT4 308 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 FXYD1O00168 92 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 SHOX2O60902 331 aaPredicted RBP14.22□□□□□ -0.13
BRAT1-202ENST00000421712 GKN3PP0CG01 181 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 RNF224P0DH78 156 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 GLI4P10075 376 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 UQCRBP14927 111 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 ZNF708P17019 499 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 PRKCAP17252 672 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 PRDX6P30041 224 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 IDH2P48735 452 aaKnown RBP14.22□□□□□ -0.13
BRAT1-202ENST00000421712 CLDN18P56856 261 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 SESN3P58005 492 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 ADORA2A-AS1P86434 159 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 SGCBQ16585 318 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 ZSWIM7Q19AV6 140 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 TMEM44Q2T9K0 475 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 ACSF3Q4G176 576 aaPredicted RBP14.22□□□□□ -0.13
BRAT1-202ENST00000421712 RTL6Q6ICC9 239 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 PPP4R4Q6NUP7 873 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 P4HA3Q7Z4N8 544 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 PTOV1Q86YD1 416 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 SLC30A8Q8IWU4 369 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 ZZZ3Q8IYH5 903 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 ZNF440Q8IYI8 595 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 MARVELD2Q8N4S9 558 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 ANKS4BQ8N8V4 417 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 FAM71CQ8NEG0 241 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 POC1BQ8TC44 478 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 ZPLD1Q8TCW7 415 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 SDCCAG3Q96C92 435 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 MRGPRX4Q96LA9 322 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 SPATA9Q9BWV2 254 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 DNAJB12Q9NXW2 375 aaKnown RBP14.22□□□□□ -0.13
BRAT1-202ENST00000421712 FAM215AQ9Y5M1 114 aa14.22□□□□□ -0.13
BRAT1-202ENST00000421712 PCNX1Q96RV3 2341 aa14.21□□□□□ -0.13
BRAT1-202ENST00000421712 GCN1Q92616 2671 aaKnown RBP14.21□□□□□ -0.13
BRAT1-202ENST00000421712 CDHR4A6H8M9 788 aa14.21□□□□□ -0.13
BRAT1-202ENST00000421712 PRORSD1PA6NEY8 169 aa14.21□□□□□ -0.13
BRAT1-202ENST00000421712 CLCA1A8K7I4 914 aa14.21□□□□□ -0.13
BRAT1-202ENST00000421712 H0YC42 278 aa14.21□□□□□ -0.13
BRAT1-202ENST00000421712 NDUFAB1O14561 156 aa14.21□□□□□ -0.13
BRAT1-202ENST00000421712 EIF1AYO14602 144 aaKnown RBP14.21□□□□□ -0.13
BRAT1-202ENST00000421712 EPPINO95925 133 aa14.21□□□□□ -0.13
BRAT1-202ENST00000421712 ADH6P28332 368 aa14.21□□□□□ -0.13
BRAT1-202ENST00000421712 SFTPDP35247 375 aa14.21□□□□□ -0.13
BRAT1-202ENST00000421712 CPA2P48052 419 aa14.21□□□□□ -0.13
BRAT1-202ENST00000421712 SUCLG1P53597 346 aaKnown RBP14.21□□□□□ -0.13
BRAT1-202ENST00000421712 TPD52P55327 224 aaPredicted RBP14.21□□□□□ -0.13
BRAT1-202ENST00000421712 CLDN20P56880 219 aa14.21□□□□□ -0.13
BRAT1-202ENST00000421712 RPS3AP61247 264 aaKnown RBP14.21□□□□□ -0.13
BRAT1-202ENST00000421712 RAC1P63000 192 aa14.21□□□□□ -0.13
BRAT1-202ENST00000421712 EEF1A1P68104 462 aaKnown RBP14.21□□□□□ -0.13
BRAT1-202ENST00000421712 MERTKQ12866 999 aa14.21□□□□□ -0.13
BRAT1-202ENST00000421712 INTS11Q5TA45 600 aaKnown RBP14.21□□□□□ -0.13
BRAT1-202ENST00000421712 RNF220Q5VTB9 566 aa14.21□□□□□ -0.13
BRAT1-202ENST00000421712 XKRXQ6PP77 449 aa14.21□□□□□ -0.13
BRAT1-202ENST00000421712 ZNF550Q7Z398 422 aa14.21□□□□□ -0.13
BRAT1-202ENST00000421712 NET1Q7Z628 596 aaPredicted RBP14.21□□□□□ -0.13
BRAT1-202ENST00000421712 ARPINQ7Z6K5 226 aa14.21□□□□□ -0.13
BRAT1-202ENST00000421712 ARMC8Q8IUR7 673 aa14.21□□□□□ -0.13
BRAT1-202ENST00000421712 GRAMD2AQ8IUY3 354 aa14.21□□□□□ -0.13
BRAT1-202ENST00000421712 LILRA2Q8N149 483 aa14.21□□□□□ -0.13
BRAT1-202ENST00000421712 CLIP4Q8N3C7 705 aa14.21□□□□□ -0.13
BRAT1-202ENST00000421712 ZNF808Q8N4W9 903 aaPredicted RBP14.21□□□□□ -0.13
BRAT1-202ENST00000421712 SLC26A7Q8TE54 656 aa14.21□□□□□ -0.13
BRAT1-202ENST00000421712 ST8SIA1Q92185 356 aa14.21□□□□□ -0.13
BRAT1-202ENST00000421712 HOPXQ9BPY8 73 aaPredicted RBP14.21□□□□□ -0.13
BRAT1-202ENST00000421712 CALHM2Q9HA72 323 aa14.21□□□□□ -0.13
BRAT1-202ENST00000421712 SERINC1Q9NRX5 453 aa14.21□□□□□ -0.13
BRAT1-202ENST00000421712 ACER3Q9NUN7 267 aa14.21□□□□□ -0.13
BRAT1-202ENST00000421712 AP3M1Q9Y2T2 418 aa14.21□□□□□ -0.13
BRAT1-202ENST00000421712 UBR5O95071 2799 aaPredicted RBP14.21□□□□□ -0.14
BRAT1-202ENST00000421712 PHF3Q92576 2039 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms