RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 POLE3Q9NRF9 147 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 ATP6V1HQ9UI12 483 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 CYTH4Q9UIA0 394 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 CRLS1Q9UJA2 301 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 ANAPC7Q9UJX3 599 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 WDR45Q9Y484 360 aa2.76□□□□□ -1.97
HMGB1P49-201ENST00000418882 SCN2AQ99250 2005 aa2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 FAM230AA0A1W2PPH8 454 aa2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 TRIM49D1C9J1S8 452 aa2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 H3BMQ9 156 aa2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 NOL3O60936 208 aaKnown RBP2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 NPIPB7O75200 414 aa2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 TOM1L1O75674 476 aa2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 TSPY4P0CV99 314 aa2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 TSPY10P0CW01 314 aa2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 GABRR1P24046 479 aa2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 CD1BP29016 333 aa2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 MDH1P40925 334 aaKnown RBP2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 PTGFRP43088 359 aa2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 MAGEA5P43359 124 aa2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 IFNAR2P48551 515 aa2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 ACTR1AP61163 376 aa2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 LAGE3Q14657 143 aa2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 EOGTQ5NDL2 527 aa2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 ATF7IP2Q5U623 682 aa2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 IRGCQ6NXR0 463 aa2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 FAM199XQ6PEV8 388 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 DENND6BQ8NEG7 585 aa2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 MYDGFQ969H8 173 aa2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 SLC35E1Q96K37 410 aa2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 CITED1Q99966 193 aa2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 EDEM2Q9BV94 578 aa2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 RAB17Q9H0T7 212 aa2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 NANOGQ9H9S0 305 aa2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 AATFQ9NY61 560 aaKnown RBP eCLIP2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 WRAP73Q9P2S5 460 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 EXTL2Q9UBQ6 330 aa2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 HPCAL4Q9UM19 191 aa2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 ASB3Q9Y575 518 aa2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 IKBKGQ9Y6K9 419 aa2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 MTCL1Q9Y4B5 1905 aaKnown RBP2.75□□□□□ -1.97
HMGB1P49-201ENST00000418882 ANKRD30BLA7E2S9 258 aa2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 PP2D1A8MPX8 630 aa2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 F8WDY8 70 aa2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 RASGRF2O14827 1237 aa2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 STX7O15400 261 aaKnown RBP2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 SSX5O60225 188 aa2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 AK1P00568 194 aa2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 F10P00742 488 aa2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 IGKV3-11P04433 115 aa2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 HBQ1P09105 142 aa2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 ZNF853P0CG23 659 aa2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 SFTPCP11686 197 aa2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 DNAJB1P25685 340 aa2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 TAGLN2P37802 199 aaKnown RBP2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 APOC4P55056 127 aa2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 NUP107P57740 925 aa2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 CHIT1Q13231 466 aa2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 SCYL2Q6P3W7 929 aa2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 IGFL3Q6UXB1 125 aa2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 RBM43Q6ZSC3 357 aaKnown RBP2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 ANKRD37Q7Z713 158 aa2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 CBWD2Q8IUF1 395 aa2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 TMEM252Q8N6L7 170 aa2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 SUMF2Q8NBJ7 301 aa2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 OR5AU1Q8NGC0 362 aa2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 OR52I1Q8NGK6 324 aa2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 OR2T34Q8NGX1 318 aa2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 RNF139Q8WU17 664 aa2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 C14orf79Q96F83 325 aa2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 SDSLQ96GA7 329 aa2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 B3GNT2Q9NY97 397 aa2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 TMOD2Q9NZR1 351 aa2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 B9D1Q9UPM9 204 aa2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 SCML2Q9UQR0 700 aa2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 RNF6Q9Y252 685 aa2.74□□□□□ -1.97
HMGB1P49-201ENST00000418882 CLRN2A0PK11 232 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 OR6C65A6NJZ3 312 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 RSPH10B2B2RC85 870 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 AP3B1O00203 1094 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 KLHL41O60662 606 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 CA11O75493 328 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 SPAG6O75602 509 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 PALMO75781 387 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 B3GAT3O94766 335 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 IGF1P05019 195 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 RSPH10BP0C881 870 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 PAICSP22234 425 aaKnown RBP2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 ADRA1AP35348 466 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 UBE2HP62256 183 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 NTHL1P78549 312 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 HMGN5P82970 282 aaKnown RBP2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 BEX3Q00994 111 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 BDH1Q02338 343 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 GBE1Q04446 702 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 TRIP10Q15642 601 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 RABL6Q3YEC7 729 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 HSP90AA5PQ58FG0 334 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 ACSM5Q6NUN0 579 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 UNQ9370/PRO34162Q6UXP9 181 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms