RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 MLKLQ8NB16 471 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 TMEM178AQ8NBL3 297 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 SDR9C7Q8NEX9 313 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 GRHL3Q8TE85 626 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 PHLDA1Q8WV24 401 aaPredicted RBP2.25□□□□□ -2.05
MCF2-204ENST00000414978 PAGE5Q96GU1 130 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 MARCH7Q9H992 704 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 RMND1Q9NWS8 449 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 HACD3Q9P035 362 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 LHX3Q9UBR4 397 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 MAN1B1Q9UKM7 699 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 POFUT2Q9Y2G5 429 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 RHBDD3Q9Y3P4 386 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 HS3ST3B1Q9Y662 390 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 MAD1L1Q9Y6D9 718 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 NCOR2Q9Y618 2525 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 PPP1R2P9O14990 202 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 BUB1O43683 1085 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 EFNA2O43921 213 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 TRMUO75648 421 aaKnown RBP2.25□□□□□ -2.05
MCF2-204ENST00000414978 TDP2O95551 362 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 LDLRP01130 860 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 ANXA5P08758 320 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 MSH3P20585 1137 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 RPL9P32969 192 aaKnown RBP2.25□□□□□ -2.05
MCF2-204ENST00000414978 HMGCLP35914 325 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 CCT6AP40227 531 aaKnown RBP2.25□□□□□ -2.05
MCF2-204ENST00000414978 GRIA1P42261 906 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 SEC61GP60059 68 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 MYL5Q02045 173 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 EEF1A2Q05639 463 aaKnown RBP2.25□□□□□ -2.05
MCF2-204ENST00000414978 FCHO2Q0JRZ9 810 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 KLF9Q13886 244 aaPredicted RBP2.25□□□□□ -2.05
MCF2-204ENST00000414978 CHRNA6Q15825 494 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 ZNF549Q6P9A3 640 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 ADGRG3Q86Y34 549 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 GTPBP8Q8N3Z3 284 aaPredicted RBP2.25□□□□□ -2.05
MCF2-204ENST00000414978 MAPKAPK5-AS1Q8N8E1 139 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 PAPD5Q8NDF8 572 aaKnown RBP2.25□□□□□ -2.05
MCF2-204ENST00000414978 SPATA4Q8NEY3 305 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 OR13A1Q8NGR1 328 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 RPLP0P6Q8NHW5 317 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 GIPC3Q8TF64 312 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 RLN3Q8WXF3 142 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 PIK3R3Q92569 461 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 ADGRG7Q96K78 797 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 C4orf45Q96LM5 186 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 PLIN2Q99541 437 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 BTBD10Q9BSF8 475 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 TMEM43Q9BTV4 400 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 LIME1Q9H400 295 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 ZNF703Q9H7S9 590 aaPredicted RBP2.25□□□□□ -2.05
MCF2-204ENST00000414978 UCK1Q9HA47 277 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 CTSFQ9UBX1 484 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 SLC9A8Q9Y2E8 581 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 TNFRSF18Q9Y5U5 241 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 MRPS18BQ9Y676 258 aaKnown RBP2.25□□□□□ -2.05
MCF2-204ENST00000414978 USP34Q70CQ2 3546 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 MYO18BQ8IUG5 2567 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 A0A075B6Q4 140 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 YJEFN3A6XGL0 299 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 PP2D1A8MPX8 630 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 SLC37A4O43826 429 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 PRSS2P07478 247 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 CD1DP15813 335 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 SUCLG1P53597 346 aaKnown RBP2.25□□□□□ -2.05
MCF2-204ENST00000414978 SRSF4Q08170 494 aaKnown RBP2.25□□□□□ -2.05
MCF2-204ENST00000414978 HSPA14Q0VDF9 509 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 ZBTB17Q13105 803 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 FHL2Q14192 279 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 ZNF234Q14588 700 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 FAM189A2Q15884 450 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 C3AR1Q16581 482 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 MTX3Q5HYI7 312 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 SCYL2Q6P3W7 929 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 SCD5Q86SK9 330 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 LDLRAD3Q86YD5 345 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 LINC01561Q8N1V8 128 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 SIDT2Q8NBJ9 832 aaKnown RBP2.25□□□□□ -2.05
MCF2-204ENST00000414978 RNF149Q8NC42 400 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 ICA1LQ8NDH6 482 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 OR1L6Q8NGR2 347 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 M1APQ8TC57 530 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 FGF14Q92915 247 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 RPP25Q9BUL9 199 aaKnown RBP2.25□□□□□ -2.05
MCF2-204ENST00000414978 BLZF1Q9H2G9 400 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 ZNF334Q9HCZ1 680 aaPredicted RBP2.25□□□□□ -2.05
MCF2-204ENST00000414978 PRSS16Q9NQE7 514 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 SLC17A5Q9NRA2 495 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 MED17Q9NVC6 651 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 HIF1ANQ9NWT6 349 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 TUBA8Q9NY65 449 aaPredicted RBP2.25□□□□□ -2.05
MCF2-204ENST00000414978 PACSIN2Q9UNF0 486 aaPredicted RBP2.25□□□□□ -2.05
MCF2-204ENST00000414978 ZNF175Q9Y473 711 aa2.25□□□□□ -2.05
MCF2-204ENST00000414978 A0A087X1B8 175 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 IGHV4-28A0A0C4DH34 117 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 TRDMT1O14717 391 aaKnown RBP2.24□□□□□ -2.05
MCF2-204ENST00000414978 ZSCAN12O43309 604 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 KDELR3O43731 214 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 SCN2BO60939 215 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms