RNA–Protein interactions for RNA: ENST00000400097.5

SNRPN-203, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPN, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-203ENST00000400097 CNOT9Q92600 299 aaKnown RBP13.04□□□□□ -0.32
SNRPN-203ENST00000400097 RNF145Q96MT1 663 aa13.04□□□□□ -0.32
SNRPN-203ENST00000400097 HOPXQ9BPY8 73 aaPredicted RBP13.04□□□□□ -0.32
SNRPN-203ENST00000400097 EXOSC3Q9NQT5 275 aaKnown RBP13.04□□□□□ -0.32
SNRPN-203ENST00000400097 SLC13A4Q9UKG4 626 aa13.04□□□□□ -0.32
SNRPN-203ENST00000400097 AP3M1Q9Y2T2 418 aa13.04□□□□□ -0.32
SNRPN-203ENST00000400097 AP4B1Q9Y6B7 739 aa13.04□□□□□ -0.32
SNRPN-203ENST00000400097 KIAA1549Q9HCM3 1950 aa13.04□□□□□ -0.32
SNRPN-203ENST00000400097 SPTBN1Q01082 2364 aaKnown RBP13.04□□□□□ -0.32
SNRPN-203ENST00000400097 TENM4Q6N022 2769 aa13.04□□□□□ -0.32
SNRPN-203ENST00000400097 RELNP78509 3460 aa13.04□□□□□ -0.32
SNRPN-203ENST00000400097 C7orf72A4D263 438 aa13.03□□□□□ -0.32
SNRPN-203ENST00000400097 LINGO3P0C6S8 592 aa13.03□□□□□ -0.32
SNRPN-203ENST00000400097 FOXF1Q12946 379 aa13.03□□□□□ -0.32
SNRPN-203ENST00000400097 ADRM1Q16186 407 aa13.03□□□□□ -0.32
SNRPN-203ENST00000400097 BCL2A1Q16548 175 aa13.03□□□□□ -0.32
SNRPN-203ENST00000400097 GTPBP8Q8N3Z3 284 aaPredicted RBP13.03□□□□□ -0.32
SNRPN-203ENST00000400097 OR10Q1Q8NGQ4 319 aa13.03□□□□□ -0.32
SNRPN-203ENST00000400097 FBXO27Q8NI29 283 aa13.03□□□□□ -0.32
SNRPN-203ENST00000400097 BCAS4Q8TDM0 211 aa13.03□□□□□ -0.32
SNRPN-203ENST00000400097 SLC26A7Q8TE54 656 aa13.03□□□□□ -0.32
SNRPN-203ENST00000400097 CCDC120Q96HB5 630 aa13.03□□□□□ -0.32
SNRPN-203ENST00000400097 MRGPRX4Q96LA9 322 aa13.03□□□□□ -0.32
SNRPN-203ENST00000400097 TRIB1Q96RU8 372 aa13.03□□□□□ -0.32
SNRPN-203ENST00000400097 COQ3Q9NZJ6 369 aa13.03□□□□□ -0.32
SNRPN-203ENST00000400097 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.02□□□□□ -0.32
SNRPN-203ENST00000400097 CDHR4A6H8M9 788 aa13.02□□□□□ -0.32
SNRPN-203ENST00000400097 PRORSD1PA6NEY8 169 aa13.02□□□□□ -0.32
SNRPN-203ENST00000400097 ZG16O60844 167 aa13.02□□□□□ -0.32
SNRPN-203ENST00000400097 GP1BBP13224 206 aa13.02□□□□□ -0.32
SNRPN-203ENST00000400097 PRKCAP17252 672 aa13.02□□□□□ -0.32
SNRPN-203ENST00000400097 ADH6P28332 368 aa13.02□□□□□ -0.32
SNRPN-203ENST00000400097 CPA2P48052 419 aa13.02□□□□□ -0.32
SNRPN-203ENST00000400097 LHX2P50458 406 aa13.02□□□□□ -0.32
SNRPN-203ENST00000400097 RPS3AP61247 264 aaKnown RBP13.02□□□□□ -0.32
SNRPN-203ENST00000400097 COPZ1P61923 177 aa13.02□□□□□ -0.32
SNRPN-203ENST00000400097 MXRA7P84157 204 aa13.02□□□□□ -0.32
SNRPN-203ENST00000400097 SRSF1Q07955 248 aaKnown RBP eCLIP13.02□□□□□ -0.322e-9■□□□□ 9.4
SNRPN-203ENST00000400097 PMPCAQ10713 525 aa13.02□□□□□ -0.32
SNRPN-203ENST00000400097 TOMM34Q15785 309 aaPredicted RBP13.02□□□□□ -0.32
SNRPN-203ENST00000400097 RNF220Q5VTB9 566 aa13.02□□□□□ -0.32
SNRPN-203ENST00000400097 ERICH5Q6P6B1 374 aa13.02□□□□□ -0.32
SNRPN-203ENST00000400097 RPTNQ6XPR3 784 aa13.02□□□□□ -0.32
SNRPN-203ENST00000400097 ZNF550Q7Z398 422 aa13.02□□□□□ -0.32
SNRPN-203ENST00000400097 NET1Q7Z628 596 aaPredicted RBP13.02□□□□□ -0.32
SNRPN-203ENST00000400097 PTOV1Q86YD1 416 aa13.02□□□□□ -0.32
SNRPN-203ENST00000400097 ARMC8Q8IUR7 673 aa13.02□□□□□ -0.32
SNRPN-203ENST00000400097 ZZZ3Q8IYH5 903 aa13.02□□□□□ -0.32
SNRPN-203ENST00000400097 FAM71CQ8NEG0 241 aa13.02□□□□□ -0.32
SNRPN-203ENST00000400097 PHF10Q8WUB8 498 aaKnown RBP13.02□□□□□ -0.32
SNRPN-203ENST00000400097 ST8SIA1Q92185 356 aa13.02□□□□□ -0.32
SNRPN-203ENST00000400097 RND1Q92730 232 aa13.02□□□□□ -0.32
SNRPN-203ENST00000400097 KLHDC3Q9BQ90 382 aa13.02□□□□□ -0.32
SNRPN-203ENST00000400097 SERINC1Q9NRX5 453 aa13.02□□□□□ -0.32
SNRPN-203ENST00000400097 RLIMQ9NVW2 624 aa13.02□□□□□ -0.32
SNRPN-203ENST00000400097 DNAJB12Q9NXW2 375 aaKnown RBP13.02□□□□□ -0.32
SNRPN-203ENST00000400097 TAGLN3Q9UI15 199 aa13.02□□□□□ -0.32
SNRPN-203ENST00000400097 CFAP73A6NFT4 308 aa13.02□□□□□ -0.33
SNRPN-203ENST00000400097 BCAS1O75363 584 aaPredicted RBP13.02□□□□□ -0.33
SNRPN-203ENST00000400097 LDLRP01130 860 aa13.02□□□□□ -0.33
SNRPN-203ENST00000400097 ZNF708P17019 499 aa13.02□□□□□ -0.33
SNRPN-203ENST00000400097 PCGF2P35227 344 aa13.02□□□□□ -0.33
SNRPN-203ENST00000400097 IDH2P48735 452 aaKnown RBP13.02□□□□□ -0.33
SNRPN-203ENST00000400097 CLDN18P56856 261 aa13.02□□□□□ -0.33
SNRPN-203ENST00000400097 SESN3P58005 492 aa13.02□□□□□ -0.33
SNRPN-203ENST00000400097 EEF1A1P68104 462 aaKnown RBP13.02□□□□□ -0.33
SNRPN-203ENST00000400097 MERTKQ12866 999 aa13.02□□□□□ -0.33
SNRPN-203ENST00000400097 SGCBQ16585 318 aa13.02□□□□□ -0.33
SNRPN-203ENST00000400097 VMACQ2NL98 169 aa13.02□□□□□ -0.33
SNRPN-203ENST00000400097 TMEM44Q2T9K0 475 aa13.02□□□□□ -0.33
SNRPN-203ENST00000400097 PDSS1Q5T2R2 415 aa13.02□□□□□ -0.33
SNRPN-203ENST00000400097 POMZP3Q6PJE2 187 aa13.02□□□□□ -0.33
SNRPN-203ENST00000400097 HACD2Q6Y1H2 254 aa13.02□□□□□ -0.33
SNRPN-203ENST00000400097 PATL1Q86TB9 770 aaKnown RBP13.02□□□□□ -0.33
SNRPN-203ENST00000400097 LILRA2Q8N149 483 aa13.02□□□□□ -0.33
SNRPN-203ENST00000400097 ATP6V1C2Q8NEY4 427 aa13.02□□□□□ -0.33
SNRPN-203ENST00000400097 BHLHE22Q8NFJ8 381 aaPredicted RBP13.02□□□□□ -0.33
SNRPN-203ENST00000400097 POC1BQ8TC44 478 aa13.02□□□□□ -0.33
SNRPN-203ENST00000400097 ZPLD1Q8TCW7 415 aa13.02□□□□□ -0.33
SNRPN-203ENST00000400097 REXO5Q96IC2 774 aaKnown RBP13.02□□□□□ -0.33
SNRPN-203ENST00000400097 DMRTA2Q96SC8 542 aa13.02□□□□□ -0.33
SNRPN-203ENST00000400097 TMEM185BQ9H7F4 350 aa13.02□□□□□ -0.33
SNRPN-203ENST00000400097 KLHL28Q9NXS3 571 aa13.02□□□□□ -0.33
SNRPN-203ENST00000400097 INTS1Q8N201 2190 aaKnown RBP13.02□□□□□ -0.33
SNRPN-203ENST00000400097 CACNA1CQ13936 2221 aa13.01□□□□□ -0.33
SNRPN-203ENST00000400097 CLEC18AA5D8T8 446 aa13.01□□□□□ -0.33
SNRPN-203ENST00000400097 GJE1A6NN92 205 aa13.01□□□□□ -0.33
SNRPN-203ENST00000400097 EIF1AYO14602 144 aaKnown RBP13.01□□□□□ -0.33
SNRPN-203ENST00000400097 EPPINO95925 133 aa13.01□□□□□ -0.33
SNRPN-203ENST00000400097 OPN1LWP04000 364 aa13.01□□□□□ -0.33
SNRPN-203ENST00000400097 GKN3PP0CG01 181 aa13.01□□□□□ -0.33
SNRPN-203ENST00000400097 ELK4P28324 431 aa13.01□□□□□ -0.33
SNRPN-203ENST00000400097 PRKAR1BP31321 381 aa13.01□□□□□ -0.33
SNRPN-203ENST00000400097 NUP107P57740 925 aa13.01□□□□□ -0.33
SNRPN-203ENST00000400097 RAC1P63000 192 aa13.01□□□□□ -0.33
SNRPN-203ENST00000400097 ACSF3Q4G176 576 aaPredicted RBP13.01□□□□□ -0.33
SNRPN-203ENST00000400097 PPP4R4Q6NUP7 873 aa13.01□□□□□ -0.33
SNRPN-203ENST00000400097 CLEC18BQ6UXF7 455 aa13.01□□□□□ -0.33
SNRPN-203ENST00000400097 NCCRP1Q6ZVX7 275 aaPredicted RBP13.01□□□□□ -0.33
SNRPN-203ENST00000400097 P4HA3Q7Z4N8 544 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms