RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 YY2O15391 372 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 ZNF254O75437 659 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 C1orf105O95561 183 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 TYRP1P17643 537 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 RAB3AP20336 220 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 CD79BP40259 229 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 NAA10P41227 235 aaPredicted RBP5.1□□□□□ -1.59
PTPRD-205ENST00000397611 CRYBB2P43320 205 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 MTNR1AP48039 350 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 PTH2RP49190 550 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 ACTC1P68032 377 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 ACTA1P68133 377 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 REEP5Q00765 189 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 HBMQ6B0K9 141 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 MEX3DQ86XN8 651 aaKnown RBP5.1□□□□□ -1.59
PTPRD-205ENST00000397611 NLGN4XQ8N0W4 816 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 SYS1Q8N2H4 156 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 ACBD4Q8NC06 268 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 OR52P1PQ8NH57 321 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 SLC6A18Q96N87 628 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 DPYSL5Q9BPU6 564 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 ARHGAP9Q9BRR9 750 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 OBP2AQ9NY56 170 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 GMEB2Q9UKD1 530 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 SF3B6Q9Y3B4 125 aaKnown RBP5.1□□□□□ -1.59
PTPRD-205ENST00000397611 CFAP20Q9Y6A4 193 aaKnown RBP5.1□□□□□ -1.59
PTPRD-205ENST00000397611 V9GYH0 126 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 B4DXG7 233 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 OR10H2O60403 315 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 PAPLNO95428 1278 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 RPS19P39019 145 aaKnown RBP5.1□□□□□ -1.59
PTPRD-205ENST00000397611 MAP3K8P41279 467 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 IFITM2Q01629 132 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 EXOSC2Q13868 293 aaKnown RBP5.1□□□□□ -1.59
PTPRD-205ENST00000397611 OR2G6Q5TZ20 316 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 ZNF529Q6P280 563 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 ADAMTSL4Q6UY14 1074 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 SLC51BQ86UW2 128 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 SLC44A3Q8N4M1 653 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 JAGN1Q8N5M9 183 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 RGMAQ96B86 450 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 ADAD1Q96M93 576 aaKnown RBP5.1□□□□□ -1.59
PTPRD-205ENST00000397611 SLC22A12Q96S37 553 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 RHNO1Q9BSD3 238 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 PINK1Q9BXM7 581 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 TRIM2Q9C040 744 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 SLC35A3Q9Y2D2 325 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 ACTL7AQ9Y615 435 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 CPEP16870 476 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 SLC19A1P41440 591 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 CTSCP53634 463 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 PCBP4P57723 403 aaKnown RBP5.1□□□□□ -1.59
PTPRD-205ENST00000397611 OC90Q02509 493 aaPredicted RBP5.1□□□□□ -1.59
PTPRD-205ENST00000397611 HLA-DQA1Q5Y7H0 255 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 SSX9Q7RTT3 188 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 ACBD7Q8N6N7 88 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 RIOK2Q9BVS4 552 aaKnown RBP5.1□□□□□ -1.59
PTPRD-205ENST00000397611 NKX6-2Q9C056 277 aaPredicted RBP5.1□□□□□ -1.59
PTPRD-205ENST00000397611 SYNPO2LQ9H987 977 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 EMC7Q9NPA0 242 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 TDP1Q9NUW8 608 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 TMEM39AQ9NV64 488 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 IL20RAQ9UHF4 553 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 RPH3AQ9Y2J0 694 aaPredicted RBP5.1□□□□□ -1.59
PTPRD-205ENST00000397611 HIF3AQ9Y2N7 669 aa5.1□□□□□ -1.59
PTPRD-205ENST00000397611 H3BQ06 376 aaPredicted RBP5.09□□□□□ -1.59
PTPRD-205ENST00000397611 J3KTA2 159 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 GJB3O75712 270 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 GKN3PP0CG01 181 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 ZNF10P21506 573 aaPredicted RBP5.09□□□□□ -1.59
PTPRD-205ENST00000397611 SRP9P49458 86 aaKnown RBP5.09□□□□□ -1.59
PTPRD-205ENST00000397611 RAE1P78406 368 aaKnown RBP5.09□□□□□ -1.59
PTPRD-205ENST00000397611 GALK2Q01415 458 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 PRDX1Q06830 199 aaKnown RBP5.09□□□□□ -1.59
PTPRD-205ENST00000397611 GFOD2Q3B7J2 385 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 NXNL2Q5VZ03 156 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 RAB11FIP2Q7L804 512 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 NLRC3Q7RTR2 1065 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 TMEM173Q86WV6 379 aaPredicted RBP5.09□□□□□ -1.59
PTPRD-205ENST00000397611 CMTM8Q8IZV2 173 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 SPRYD4Q8WW59 207 aaPredicted RBP5.09□□□□□ -1.59
PTPRD-205ENST00000397611 DIO2Q92813 273 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 OSTF1Q92882 214 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 UBE2FQ969M7 185 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 KATNB1Q9BVA0 655 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 WDR26Q9H7D7 661 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 TXNL4BQ9NX01 149 aaKnown RBP5.09□□□□□ -1.59
PTPRD-205ENST00000397611 NLRC5Q86WI3 1866 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 WRBO00258 174 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 XKRYO14609 159 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 ARPC3O15145 178 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 C8orf89P0DMQ9 161 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 NFYAP23511 347 aaPredicted RBP5.09□□□□□ -1.59
PTPRD-205ENST00000397611 OR3A2P47893 321 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 RAB5CP51148 216 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 CEBPEQ15744 281 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 ZMAT1Q5H9K5 638 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 PRSS36Q5K4E3 855 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 FAM219BQ5XKK7 198 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 TMEM107Q6UX40 140 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms