RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 CDC42P60953 191 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 DCDP81605 110 aaKnown RBP13.75□□□□□ -0.21
MKS1-202ENST00000393119 TOP3AQ13472 1001 aaPredicted RBP13.75□□□□□ -0.21
MKS1-202ENST00000393119 FGFBP1Q14512 234 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 DECR1Q16698 335 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 SLX4IPQ5VYV7 408 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 FCRLBQ6BAA4 426 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 THOC7Q6I9Y2 204 aaKnown RBP13.75□□□□□ -0.21
MKS1-202ENST00000393119 B3GLCTQ6Y288 498 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 RABEPKQ7Z6M1 372 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 FUNDC2Q9BWH2 189 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 FBXO8Q9NRD0 319 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 SACM1LQ9NTJ5 587 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 PRODH2Q9UF12 536 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.75□□□□□ -0.21
MKS1-202ENST00000393119 TPRKBQ9Y3C4 175 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 SNX5Q9Y5X3 404 aa13.75□□□□□ -0.21
MKS1-202ENST00000393119 SERINC4A6NH21 518 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 FAM47E-STBD1D6RA91 191 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 MEN1O00255 615 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 LDOC1O95751 146 aaPredicted RBP13.74□□□□□ -0.21
MKS1-202ENST00000393119 IFI30P13284 250 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 ACVR2AP27037 513 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 PPICP45877 212 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 CCR4P51679 360 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 GPR143P51810 404 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 ZNF141Q15928 474 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 GXYLT1Q4G148 440 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 C12orf73Q69YU5 71 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 HSDL2Q6YN16 418 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 ANKRD37Q7Z713 158 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 BMPERQ8N8U9 685 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 PIGXQ8TBF5 258 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 TMEM239Q8WW34 195 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 LCORQ96JN0 433 aaPredicted RBP13.74□□□□□ -0.21
MKS1-202ENST00000393119 ZBTB20Q9HC78 741 aaPredicted RBP13.74□□□□□ -0.21
MKS1-202ENST00000393119 SRPK3Q9UPE1 567 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 TRAV27A0A087WT01 109 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 CDX4O14627 284 aaPredicted RBP13.74□□□□□ -0.21
MKS1-202ENST00000393119 POLR1CO15160 346 aaPredicted RBP13.74□□□□□ -0.21
MKS1-202ENST00000393119 YKT6O15498 198 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 KLF4O43474 513 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 RGS10O43665 173 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 UTS2O95399 124 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 IFI6P09912 130 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 TGFBR1P36897 503 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 ST3GAL4Q11206 333 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 TSPAN31Q12999 210 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 KLHL26Q53HC5 615 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 MARCH3Q86UD3 253 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 SLC7A5P1Q8MH63 180 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 OR7G1Q8NGA0 311 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 OR1N1Q8NGS0 311 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 OR13C2Q8NGS9 318 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 PHOSPHO1Q8TCT1 267 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 GNPDA2Q8TDQ7 276 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 SAMD8Q96LT4 415 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 SLC46A1Q96NT5 459 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 SPSB2Q99619 263 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 BCL7BQ9BQE9 202 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 TSSK6Q9BXA6 273 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 WWTR1Q9GZV5 400 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 WARS2Q9UGM6 360 aaKnown RBP13.74□□□□□ -0.21
MKS1-202ENST00000393119 HEATR5AQ86XA9 2040 aa13.74□□□□□ -0.21
MKS1-202ENST00000393119 A0A0B4J2E0 115 aa13.73□□□□□ -0.21
MKS1-202ENST00000393119 A0A1B0GX12 115 aa13.73□□□□□ -0.21
MKS1-202ENST00000393119 GALNSP34059 522 aa13.73□□□□□ -0.21
MKS1-202ENST00000393119 ETV5P41161 510 aa13.73□□□□□ -0.21
MKS1-202ENST00000393119 CXCR4P61073 352 aa13.73□□□□□ -0.21
MKS1-202ENST00000393119 LSM3P62310 102 aaKnown RBP13.73□□□□□ -0.21
MKS1-202ENST00000393119 CDK5Q00535 292 aa13.73□□□□□ -0.21
MKS1-202ENST00000393119 ZFP36L1Q07352 338 aaKnown RBP13.73□□□□□ -0.21
MKS1-202ENST00000393119 SLC35F1Q5T1Q4 408 aa13.73□□□□□ -0.21
MKS1-202ENST00000393119 OR5M10Q6IEU7 315 aa13.73□□□□□ -0.21
MKS1-202ENST00000393119 THSD4Q6ZMP0 1018 aa13.73□□□□□ -0.21
MKS1-202ENST00000393119 PLEKHG7Q6ZR37 379 aa13.73□□□□□ -0.21
MKS1-202ENST00000393119 LRRC17Q8N6Y2 441 aa13.73□□□□□ -0.21
MKS1-202ENST00000393119 APCDD1LQ8NCL9 501 aa13.73□□□□□ -0.21
MKS1-202ENST00000393119 OR51A7Q8NH64 312 aa13.73□□□□□ -0.21
MKS1-202ENST00000393119 S100ZQ8WXG8 99 aa13.73□□□□□ -0.21
MKS1-202ENST00000393119 SIGLEC11Q96RL6 698 aa13.73□□□□□ -0.21
MKS1-202ENST00000393119 G6PC3Q9BUM1 346 aa13.73□□□□□ -0.21
MKS1-202ENST00000393119 ACOT13Q9NPJ3 140 aa13.73□□□□□ -0.21
MKS1-202ENST00000393119 CLCA1A8K7I4 914 aa13.73□□□□□ -0.21
MKS1-202ENST00000393119 ALOX12BO75342 701 aa13.73□□□□□ -0.21
MKS1-202ENST00000393119 CELA2AP08217 269 aa13.73□□□□□ -0.21
MKS1-202ENST00000393119 PSMB9P28065 219 aa13.73□□□□□ -0.21
MKS1-202ENST00000393119 TOMM34Q15785 309 aaPredicted RBP13.73□□□□□ -0.21
MKS1-202ENST00000393119 SNAPC1Q16533 368 aa13.73□□□□□ -0.21
MKS1-202ENST00000393119 ALG10BQ5I7T1 473 aa13.73□□□□□ -0.21
MKS1-202ENST00000393119 PAQR6Q6TCH4 344 aa13.73□□□□□ -0.21
MKS1-202ENST00000393119 CASP12Q6UXS9 341 aa13.73□□□□□ -0.21
MKS1-202ENST00000393119 SHFQ7M4L6 423 aa13.73□□□□□ -0.21
MKS1-202ENST00000393119 OVCH1Q7RTY7 1134 aa13.73□□□□□ -0.21
MKS1-202ENST00000393119 PLPP5Q8NEB5 264 aa13.73□□□□□ -0.21
MKS1-202ENST00000393119 HPS1Q92902 700 aa13.73□□□□□ -0.21
MKS1-202ENST00000393119 DAZLQ92904 295 aaKnown RBP13.73□□□□□ -0.21
MKS1-202ENST00000393119 ZNF578Q96N58 590 aaPredicted RBP13.73□□□□□ -0.21
MKS1-202ENST00000393119 WDR77Q9BQA1 342 aaPredicted RBP13.73□□□□□ -0.21
MKS1-202ENST00000393119 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms