RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 DENND6BQ8NEG7 585 aa1.73□□□□□ -2.13
TRAV40-201ENST00000390467 SUN5Q8TC36 379 aa1.73□□□□□ -2.13
TRAV40-201ENST00000390467 RNF139Q8WU17 664 aa1.73□□□□□ -2.13
TRAV40-201ENST00000390467 KRT35Q92764 455 aa1.73□□□□□ -2.13
TRAV40-201ENST00000390467 RPUSD4Q96CM3 377 aaKnown RBP1.73□□□□□ -2.13
TRAV40-201ENST00000390467 RNF185Q96GF1 192 aa1.73□□□□□ -2.13
TRAV40-201ENST00000390467 NMNAT2Q9BZQ4 307 aa1.73□□□□□ -2.13
TRAV40-201ENST00000390467 SIRPDQ9H106 197 aa1.73□□□□□ -2.13
TRAV40-201ENST00000390467 SH2D2AQ9NP31 389 aa1.73□□□□□ -2.13
TRAV40-201ENST00000390467 TRPV5Q9NQA5 729 aa1.73□□□□□ -2.13
TRAV40-201ENST00000390467 QPCTLQ9NXS2 382 aa1.73□□□□□ -2.13
TRAV40-201ENST00000390467 TAS2R3Q9NYW6 316 aa1.73□□□□□ -2.13
TRAV40-201ENST00000390467 PTBP2Q9UKA9 531 aaKnown RBP1.73□□□□□ -2.13
TRAV40-201ENST00000390467 TMED5Q9Y3A6 229 aa1.73□□□□□ -2.13
TRAV40-201ENST00000390467 AP1M2Q9Y6Q5 423 aa1.73□□□□□ -2.13
TRAV40-201ENST00000390467 UNC13AQ9UPW8 1703 aa1.73□□□□□ -2.13
TRAV40-201ENST00000390467 LOC100131303A0A0U1RQF7 123 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 A0A1W2PRV1 198 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 CLRN2A0PK11 232 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 ALOX15BO15296 676 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 POLR3GO15318 223 aaPredicted RBP1.72□□□□□ -2.13
TRAV40-201ENST00000390467 RNF113AO15541 343 aaKnown RBP1.72□□□□□ -2.13
TRAV40-201ENST00000390467 ADAM12O43184 909 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 KINO60870 393 aaKnown RBP1.72□□□□□ -2.13
TRAV40-201ENST00000390467 SMPD2O60906 423 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 KERAO60938 352 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 SLITRK3O94933 977 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 TRIM16O95361 564 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 STAMBPO95630 424 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 FGFR1OPO95684 399 aaKnown RBP1.72□□□□□ -2.13
TRAV40-201ENST00000390467 OLFM2O95897 454 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 CCDC172P0C7W6 258 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 TBPP20226 339 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 IL10P22301 178 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 SOX6P35712 828 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 ACAA2P42765 397 aaKnown RBP1.72□□□□□ -2.13
TRAV40-201ENST00000390467 HTR5AP47898 357 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 SLC6A8P48029 635 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 CCR6P51684 374 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 HNRNPFP52597 415 aaKnown RBP1.72□□□□□ -2.13
TRAV40-201ENST00000390467 HERVK_113P61574 105 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 CTAG1AP78358 180 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 CUL2Q13617 745 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 CDKN3Q16667 212 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 BOLA3Q53S33 107 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 ANGPTL8Q6UXH0 198 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 RGS9BPQ6ZS82 235 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 PAQR9Q6ZVX9 377 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 P4HA3Q7Z4N8 544 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 HSD11B1LQ7Z5J1 315 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 LINC01551Q86U37 167 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 CERS5Q8N5B7 392 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 TMCO5AQ8N6Q1 288 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 OR6C4Q8NGE1 309 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 TRUB1Q8WWH5 349 aaKnown RBP1.72□□□□□ -2.13
TRAV40-201ENST00000390467 OR1E3Q8WZA6 343 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 SPXQ9BT56 116 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 TMEM121Q9BTD3 319 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 IQCGQ9H095 443 aaKnown RBP1.72□□□□□ -2.13
TRAV40-201ENST00000390467 C1orf21Q9H246 121 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 THAP9Q9H5L6 903 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 VCPKMTQ9H867 229 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 CRLF2Q9HC73 371 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 TM9SF3Q9HD45 589 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 MID1IP1Q9NPA3 183 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 DDX18Q9NVP1 670 aaKnown RBP1.72□□□□□ -2.13
TRAV40-201ENST00000390467 PAK1IP1Q9NWT1 392 aaPredicted RBP1.72□□□□□ -2.13
TRAV40-201ENST00000390467 ACTR3BQ9P1U1 418 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 GALPQ9UBC7 116 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 TP53TG5Q9Y2B4 290 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 CAB39Q9Y376 341 aaPredicted RBP1.72□□□□□ -2.13
TRAV40-201ENST00000390467 WDR45Q9Y484 360 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 MAB21L2Q9Y586 359 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 BRD4O60885 1362 aaPredicted RBP1.72□□□□□ -2.13
TRAV40-201ENST00000390467 LRP4O75096 1905 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 NSD2O96028 1365 aa1.72□□□□□ -2.13
TRAV40-201ENST00000390467 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.72□□□□□ -2.13
TRAV40-201ENST00000390467 A0A096LNJ9 63 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 TTC26A0AVF1 554 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 F8VZ95 297 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 NMT2O60551 498 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 HCN1O60741 890 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 NOL3O60936 208 aaKnown RBP1.71□□□□□ -2.14
TRAV40-201ENST00000390467 KLF8O95600 359 aaPredicted RBP1.71□□□□□ -2.14
TRAV40-201ENST00000390467 PDHBP11177 359 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 ARF4P18085 180 aaPredicted RBP1.71□□□□□ -2.14
TRAV40-201ENST00000390467 ADSSP30520 456 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 HSD17B2P37059 387 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 EMDP50402 254 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 ETV1P50549 477 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 ACTR1AP61163 376 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 HERVK_113P63132 956 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 ERVK-8P63133 956 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 ST3GAL3Q11203 375 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 PPP1R8Q12972 351 aaKnown RBP1.71□□□□□ -2.14
TRAV40-201ENST00000390467 TRDNQ13061 729 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 TSTA3Q13630 321 aaPredicted RBP1.71□□□□□ -2.14
TRAV40-201ENST00000390467 MXD4Q14582 209 aaPredicted RBP1.71□□□□□ -2.14
TRAV40-201ENST00000390467 MORF4L2Q15014 288 aa1.71□□□□□ -2.14
TRAV40-201ENST00000390467 SMU1Q2TAY7 513 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms