RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 ENPP6Q6UWR7 440 aa16.94■□□□□ 0.3
SSU72-203ENST00000378725 CD163Q86VB7 1156 aa16.94■□□□□ 0.3
SSU72-203ENST00000378725 ARMC8Q8IUR7 673 aa16.94■□□□□ 0.3
SSU72-203ENST00000378725 PM20D2Q8IYS1 436 aa16.94■□□□□ 0.3
SSU72-203ENST00000378725 MICU2Q8IYU8 434 aa16.94■□□□□ 0.3
SSU72-203ENST00000378725 PGAM4Q8N0Y7 254 aa16.94■□□□□ 0.3
SSU72-203ENST00000378725 BHLHE22Q8NFJ8 381 aaPredicted RBP16.94■□□□□ 0.3
SSU72-203ENST00000378725 OR5M9Q8NGP3 310 aa16.94■□□□□ 0.3
SSU72-203ENST00000378725 OR5M1Q8NGP8 315 aa16.94■□□□□ 0.3
SSU72-203ENST00000378725 ST8SIA1Q92185 356 aa16.94■□□□□ 0.3
SSU72-203ENST00000378725 MRGPRX4Q96LA9 322 aa16.94■□□□□ 0.3
SSU72-203ENST00000378725 PINK1Q9BXM7 581 aa16.94■□□□□ 0.3
SSU72-203ENST00000378725 SPAG4Q9NPE6 437 aa16.94■□□□□ 0.3
SSU72-203ENST00000378725 ACER3Q9NUN7 267 aa16.94■□□□□ 0.3
SSU72-203ENST00000378725 NDE1Q9NXR1 346 aa16.94■□□□□ 0.3
SSU72-203ENST00000378725 TINAGQ9UJW2 476 aa16.94■□□□□ 0.3
SSU72-203ENST00000378725 AP4B1Q9Y6B7 739 aa16.94■□□□□ 0.3
SSU72-203ENST00000378725 TRGV8A0A0C4DH27 118 aa16.93■□□□□ 0.3
SSU72-203ENST00000378725 CFAP73A6NFT4 308 aa16.93■□□□□ 0.3
SSU72-203ENST00000378725 AHRRA9YTQ3 701 aa16.93■□□□□ 0.3
SSU72-203ENST00000378725 EFNA2O43921 213 aa16.93■□□□□ 0.3
SSU72-203ENST00000378725 TPST1O60507 370 aa16.93■□□□□ 0.3
SSU72-203ENST00000378725 EPPINO95925 133 aa16.93■□□□□ 0.3
SSU72-203ENST00000378725 HOXD4P09016 255 aaPredicted RBP16.93■□□□□ 0.3
SSU72-203ENST00000378725 PEPDP12955 493 aa16.93■□□□□ 0.3
SSU72-203ENST00000378725 ZNF708P17019 499 aa16.93■□□□□ 0.3
SSU72-203ENST00000378725 CPOXP36551 454 aa16.93■□□□□ 0.3
SSU72-203ENST00000378725 STARP49675 285 aa16.93■□□□□ 0.3
SSU72-203ENST00000378725 CCR4P51679 360 aa16.93■□□□□ 0.3
SSU72-203ENST00000378725 CRYBA2P53672 197 aa16.93■□□□□ 0.3
SSU72-203ENST00000378725 CLDN18P56856 261 aa16.93■□□□□ 0.3
SSU72-203ENST00000378725 SESN3P58005 492 aa16.93■□□□□ 0.3
SSU72-203ENST00000378725 SLC25A3Q00325 362 aa16.93■□□□□ 0.3
SSU72-203ENST00000378725 KCNC4Q03721 635 aa16.93■□□□□ 0.3
SSU72-203ENST00000378725 EPS8Q12929 822 aa16.93■□□□□ 0.3
SSU72-203ENST00000378725 C4orf17Q53FE4 359 aa16.93■□□□□ 0.3
SSU72-203ENST00000378725 C1QL3Q5VWW1 255 aa16.93■□□□□ 0.3
SSU72-203ENST00000378725 ZNF550Q7Z398 422 aa16.93■□□□□ 0.3
SSU72-203ENST00000378725 TMEM234Q8WY98 164 aa16.93■□□□□ 0.3
SSU72-203ENST00000378725 RNF145Q96MT1 663 aa16.93■□□□□ 0.3
SSU72-203ENST00000378725 TP63Q9H3D4 680 aaPredicted RBP16.93■□□□□ 0.3
SSU72-203ENST00000378725 ALG2Q9H553 416 aa16.93■□□□□ 0.3
SSU72-203ENST00000378725 GMPR2Q9P2T1 348 aaKnown RBP16.93■□□□□ 0.3
SSU72-203ENST00000378725 CLEC18AA5D8T8 446 aa16.92■□□□□ 0.3
SSU72-203ENST00000378725 B2RBV5 119 aa16.92■□□□□ 0.3
SSU72-203ENST00000378725 AP3D1O14617 1153 aa16.92■□□□□ 0.3
SSU72-203ENST00000378725 WDR1O75083 606 aa16.92■□□□□ 0.3
SSU72-203ENST00000378725 C8BP07358 591 aa16.92■□□□□ 0.3
SSU72-203ENST00000378725 GABRA1P14867 456 aa16.92■□□□□ 0.3
SSU72-203ENST00000378725 RYKP34925 604 aa16.92■□□□□ 0.3
SSU72-203ENST00000378725 KCNJ5P48544 419 aa16.92■□□□□ 0.3
SSU72-203ENST00000378725 GSK3BP49841 420 aa16.92■□□□□ 0.3
SSU72-203ENST00000378725 RAC1P63000 192 aa16.92■□□□□ 0.3
SSU72-203ENST00000378725 FOXF1Q12946 379 aa16.92■□□□□ 0.3
SSU72-203ENST00000378725 DUSP7Q16829 419 aa16.92■□□□□ 0.3
SSU72-203ENST00000378725 C16orf89Q6UX73 402 aa16.92■□□□□ 0.3
SSU72-203ENST00000378725 CLEC18BQ6UXF7 455 aa16.92■□□□□ 0.3
SSU72-203ENST00000378725 COMTD1Q86VU5 262 aa16.92■□□□□ 0.3
SSU72-203ENST00000378725 CLEC18CQ8NCF0 446 aa16.92■□□□□ 0.3
SSU72-203ENST00000378725 TAMM41Q96BW9 452 aa16.92■□□□□ 0.3
SSU72-203ENST00000378725 EVA1AQ9H8M9 152 aa16.92■□□□□ 0.3
SSU72-203ENST00000378725 SLC5A6Q9Y289 635 aa16.92■□□□□ 0.3
SSU72-203ENST00000378725 MEMO1Q9Y316 297 aa16.92■□□□□ 0.3
SSU72-203ENST00000378725 PCNX3Q9H6A9 2034 aa16.91■□□□□ 0.3
SSU72-203ENST00000378725 FIGNL2A6NMB9 653 aa16.91■□□□□ 0.3
SSU72-203ENST00000378725 E9PLN8 166 aa16.91■□□□□ 0.3
SSU72-203ENST00000378725 SYT5O00445 386 aa16.91■□□□□ 0.3
SSU72-203ENST00000378725 LRRTM2O43300 516 aa16.91■□□□□ 0.3
SSU72-203ENST00000378725 LGI1O95970 557 aa16.91■□□□□ 0.3
SSU72-203ENST00000378725 GKN3PP0CG01 181 aa16.91■□□□□ 0.3
SSU72-203ENST00000378725 ELK4P28324 431 aa16.91■□□□□ 0.3
SSU72-203ENST00000378725 KDELR2P33947 212 aa16.91■□□□□ 0.3
SSU72-203ENST00000378725 PTGER4P35408 488 aa16.91■□□□□ 0.3
SSU72-203ENST00000378725 IDH2P48735 452 aaKnown RBP16.91■□□□□ 0.3
SSU72-203ENST00000378725 CLDN15P56746 228 aa16.91■□□□□ 0.3
SSU72-203ENST00000378725 SRSF1Q07955 248 aaKnown RBP eCLIP16.91■□□□□ 0.3
SSU72-203ENST00000378725 GLIPR1L2Q4G1C9 344 aa16.91■□□□□ 0.3
SSU72-203ENST00000378725 RTL6Q6ICC9 239 aa16.91■□□□□ 0.3
SSU72-203ENST00000378725 ZNF585AQ6P3V2 769 aa16.91■□□□□ 0.3
SSU72-203ENST00000378725 ULK2Q8IYT8 1036 aa16.91■□□□□ 0.3
SSU72-203ENST00000378725 RBM15BQ8NDT2 890 aaKnown RBP16.91■□□□□ 0.3
SSU72-203ENST00000378725 GPR32P1Q8NGA4 272 aa16.91■□□□□ 0.3
SSU72-203ENST00000378725 ZNF563Q8TA94 476 aa16.91■□□□□ 0.3
SSU72-203ENST00000378725 ZPLD1Q8TCW7 415 aa16.91■□□□□ 0.3
SSU72-203ENST00000378725 DMRTA2Q96SC8 542 aa16.91■□□□□ 0.3
SSU72-203ENST00000378725 VKORC1Q9BQB6 163 aa16.91■□□□□ 0.3
SSU72-203ENST00000378725 ADA2Q9NZK5 511 aa16.91■□□□□ 0.3
SSU72-203ENST00000378725 CD300AQ9UGN4 299 aa16.91■□□□□ 0.3
SSU72-203ENST00000378725 PRRC2CQ9Y520 2896 aaKnown RBP16.91■□□□□ 0.3
SSU72-203ENST00000378725 H3BML4 177 aa16.9■□□□□ 0.3
SSU72-203ENST00000378725 CCL21O00585 134 aa16.9■□□□□ 0.3
SSU72-203ENST00000378725 OPN1SWP03999 348 aa16.9■□□□□ 0.3
SSU72-203ENST00000378725 PRG2P13727 222 aa16.9■□□□□ 0.3
SSU72-203ENST00000378725 POU3F2P20265 443 aaPredicted RBP16.9■□□□□ 0.3
SSU72-203ENST00000378725 IL11P20809 199 aa16.9■□□□□ 0.3
SSU72-203ENST00000378725 CD247P20963 164 aa16.9■□□□□ 0.3
SSU72-203ENST00000378725 ACVR2AP27037 513 aa16.9■□□□□ 0.3
SSU72-203ENST00000378725 SUCLG1P53597 346 aaKnown RBP16.9■□□□□ 0.3
SSU72-203ENST00000378725 MXRA7P84157 204 aa16.9■□□□□ 0.3
SSU72-203ENST00000378725 SF3B4Q15427 424 aaKnown RBP eCLIP16.9■□□□□ 0.31e-6■■■■■ 26.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms