RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 CD1CP29017 333 aa13.75□□□□□ -0.21
NDC1-201ENST00000371429 OGFRL1Q5TC84 451 aaPredicted RBP13.75□□□□□ -0.21
NDC1-201ENST00000371429 PODNL1Q6PEZ8 512 aa13.75□□□□□ -0.21
NDC1-201ENST00000371429 MINDY2Q8NBR6 621 aa13.75□□□□□ -0.21
NDC1-201ENST00000371429 NUDT22Q9BRQ3 303 aa13.75□□□□□ -0.21
NDC1-201ENST00000371429 POLHQ9Y253 713 aa13.75□□□□□ -0.21
NDC1-201ENST00000371429 SLC6A5Q9Y345 797 aa13.75□□□□□ -0.21
NDC1-201ENST00000371429 PRKRAO75569 313 aaKnown RBP13.75□□□□□ -0.21
NDC1-201ENST00000371429 FURINP09958 794 aa13.75□□□□□ -0.21
NDC1-201ENST00000371429 RAB3BP20337 219 aa13.75□□□□□ -0.21
NDC1-201ENST00000371429 TSFMP43897 325 aaKnown RBP13.75□□□□□ -0.21
NDC1-201ENST00000371429 MED25Q71SY5 747 aa13.75□□□□□ -0.21
NDC1-201ENST00000371429 EDEM2Q9BV94 578 aa13.75□□□□□ -0.21
NDC1-201ENST00000371429 FOLH1BQ9HBA9 442 aa13.75□□□□□ -0.21
NDC1-201ENST00000371429 DYNLRB1Q9NP97 96 aa13.75□□□□□ -0.21
NDC1-201ENST00000371429 ATG4BQ9Y4P1 393 aa13.75□□□□□ -0.21
NDC1-201ENST00000371429 LRP5O75197 1615 aa13.75□□□□□ -0.21
NDC1-201ENST00000371429 SERINC4A6NH21 518 aa13.75□□□□□ -0.21
NDC1-201ENST00000371429 TARM1B6A8C7 271 aa13.75□□□□□ -0.21
NDC1-201ENST00000371429 MAGEA12P43365 314 aa13.75□□□□□ -0.21
NDC1-201ENST00000371429 CYB561P49447 251 aa13.75□□□□□ -0.21
NDC1-201ENST00000371429 PCBD1P61457 104 aa13.75□□□□□ -0.21
NDC1-201ENST00000371429 OTUD1Q5VV17 481 aaPredicted RBP13.75□□□□□ -0.21
NDC1-201ENST00000371429 ZNF517Q6ZMY9 492 aaPredicted RBP13.75□□□□□ -0.21
NDC1-201ENST00000371429 Q6ZS52 159 aa13.75□□□□□ -0.21
NDC1-201ENST00000371429 SAP130Q9H0E3 1048 aa13.75□□□□□ -0.21
NDC1-201ENST00000371429 ZNF700Q9H0M5 742 aa13.75□□□□□ -0.21
NDC1-201ENST00000371429 OR10A2Q9H208 303 aa13.75□□□□□ -0.21
NDC1-201ENST00000371429 SLC6A15Q9H2J7 730 aa13.75□□□□□ -0.21
NDC1-201ENST00000371429 YBX2Q9Y2T7 364 aaKnown RBP13.75□□□□□ -0.21
NDC1-201ENST00000371429 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.75□□□□□ -0.21
NDC1-201ENST00000371429 EEF1E1O43324 174 aaKnown RBP13.75□□□□□ -0.21
NDC1-201ENST00000371429 NUDT7P0C024 238 aa13.75□□□□□ -0.21
NDC1-201ENST00000371429 RPS19BP1Q86WX3 136 aaKnown RBP13.75□□□□□ -0.21
NDC1-201ENST00000371429 TMEM151AQ8N4L1 468 aa13.75□□□□□ -0.21
NDC1-201ENST00000371429 MARVELD2Q8N4S9 558 aa13.75□□□□□ -0.21
NDC1-201ENST00000371429 SENP5Q96HI0 755 aaPredicted RBP13.75□□□□□ -0.21
NDC1-201ENST00000371429 PDFQ9HBH1 243 aa13.75□□□□□ -0.21
NDC1-201ENST00000371429 CNOT11Q9UKZ1 510 aaKnown RBP13.75□□□□□ -0.21
NDC1-201ENST00000371429 HIF3AQ9Y2N7 669 aa13.75□□□□□ -0.21
NDC1-201ENST00000371429 TACR3P29371 465 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 CD97P48960 835 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 ART1P52961 327 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 EXT1Q16394 746 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 PROX2Q3B8N5 592 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 DTX3Q8N9I9 347 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 SLC37A3Q8NCC5 494 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 HAVCR2Q8TDQ0 301 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 TM4SF18Q96CE8 201 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 P2RY12Q9H244 342 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 COPZ2Q9P299 210 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 PRDM4Q9UKN5 801 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 MRPS2Q9Y399 296 aaKnown RBP13.74□□□□□ -0.21
NDC1-201ENST00000371429 EMC9Q9Y3B6 208 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 NME7Q9Y5B8 376 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 STRCQ7RTU9 1775 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 ZSCAN5BA6NJL1 495 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 PRKYO43930 277 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 BMP4P12644 408 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 SSTR4P31391 388 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 GABARAPL2P60520 117 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 KCNAB1Q14722 419 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 MOGQ16653 247 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 SLC48A1Q6P1K1 146 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 ADGRG5Q8IZF4 528 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 GPR148Q8TDV2 347 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 CITED4Q96RK1 184 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 MNTQ99583 582 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 MEPEQ9NQ76 525 aaPredicted RBP13.74□□□□□ -0.21
NDC1-201ENST00000371429 FBXL3Q9UKT7 428 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 PCDHB10Q9UN67 800 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 PLRG1O43660 514 aaKnown RBP13.74□□□□□ -0.21
NDC1-201ENST00000371429 SLC43A1O75387 559 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 CSF2P04141 144 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 HSD17B7P56937 341 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 ARL6IP1Q15041 203 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 AAED1Q7RTV5 226 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 GALNT11Q8NCW6 608 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 ISOC1Q96CN7 298 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 THSD1Q9NS62 852 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 ANKRD10Q9NXR5 420 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 SLAMF8Q9P0V8 285 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 ABCG2Q9UNQ0 655 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 SLC33A1O00400 549 aaPredicted RBP13.74□□□□□ -0.21
NDC1-201ENST00000371429 ACTL6BO94805 426 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 B3GALT4O96024 378 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 SLC2A5P22732 501 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 FAM83HQ6ZRV2 1179 aaPredicted RBP13.74□□□□□ -0.21
NDC1-201ENST00000371429 Q6ZSR9 355 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 PRSS48Q7RTY5 328 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 TRIM46Q7Z4K8 759 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 KIAA0907Q7Z7F0 614 aaPredicted RBP13.74□□□□□ -0.21
NDC1-201ENST00000371429 OR5L1Q8NGL2 311 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 LMF1Q96S06 567 aa13.74□□□□□ -0.21
NDC1-201ENST00000371429 BRWD1Q9NSI6 2320 aa13.73□□□□□ -0.21
NDC1-201ENST00000371429 DCDC2BA2VCK2 349 aa13.73□□□□□ -0.21
NDC1-201ENST00000371429 SUSD5O60279 629 aa13.73□□□□□ -0.21
NDC1-201ENST00000371429 OR7A10O76100 309 aa13.73□□□□□ -0.21
NDC1-201ENST00000371429 UTS2O95399 124 aa13.73□□□□□ -0.21
NDC1-201ENST00000371429 F13BP05160 661 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms