RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 CHCHD4Q8N4Q1 142 aa12.06□□□□□ -0.48
PTPRK-207ENST00000368226 SFXN5Q8TD22 340 aa12.06□□□□□ -0.48
PTPRK-207ENST00000368226 POTEKPQ9BYX7 375 aa12.06□□□□□ -0.48
PTPRK-207ENST00000368226 NCR1O76036 304 aa12.06□□□□□ -0.48
PTPRK-207ENST00000368226 RETP07949 1114 aa12.06□□□□□ -0.48
PTPRK-207ENST00000368226 PET100P0DJ07 73 aa12.06□□□□□ -0.48
PTPRK-207ENST00000368226 RAB3AP20336 220 aa12.06□□□□□ -0.48
PTPRK-207ENST00000368226 GABRA2P47869 451 aa12.06□□□□□ -0.48
PTPRK-207ENST00000368226 WNT4P56705 351 aa12.06□□□□□ -0.48
PTPRK-207ENST00000368226 TMEM53Q6P2H8 277 aa12.06□□□□□ -0.48
PTPRK-207ENST00000368226 MEX3BQ6ZN04 569 aaKnown RBP12.06□□□□□ -0.48
PTPRK-207ENST00000368226 OR4F15Q8NGB8 312 aa12.06□□□□□ -0.48
PTPRK-207ENST00000368226 WBP2Q969T9 261 aa12.06□□□□□ -0.48
PTPRK-207ENST00000368226 MYADMQ96S97 322 aa12.06□□□□□ -0.48
PTPRK-207ENST00000368226 ELF4Q99607 663 aaPredicted RBP12.06□□□□□ -0.48
PTPRK-207ENST00000368226 C6orf106Q9H6K1 298 aaPredicted RBP12.06□□□□□ -0.48
PTPRK-207ENST00000368226 ZNF616Q08AN1 781 aa12.06□□□□□ -0.48
PTPRK-207ENST00000368226 HSF5Q4G112 596 aaPredicted RBP12.06□□□□□ -0.48
PTPRK-207ENST00000368226 TLDC1Q6P9B6 456 aa12.06□□□□□ -0.48
PTPRK-207ENST00000368226 TBPL2Q6SJ96 375 aa12.06□□□□□ -0.48
PTPRK-207ENST00000368226 MOB3CQ70IA8 216 aa12.06□□□□□ -0.48
PTPRK-207ENST00000368226 COMTD1Q86VU5 262 aa12.06□□□□□ -0.48
PTPRK-207ENST00000368226 SUSD5O60279 629 aa12.06□□□□□ -0.48
PTPRK-207ENST00000368226 TPMTP51580 245 aa12.06□□□□□ -0.48
PTPRK-207ENST00000368226 SNRPD2P62316 118 aaKnown RBP12.06□□□□□ -0.48
PTPRK-207ENST00000368226 SLC22A6Q4U2R8 563 aa12.06□□□□□ -0.48
PTPRK-207ENST00000368226 FAM57BQ71RH2 274 aa12.06□□□□□ -0.48
PTPRK-207ENST00000368226 PRSS48Q7RTY5 328 aa12.06□□□□□ -0.48
PTPRK-207ENST00000368226 PIWIL3Q7Z3Z3 882 aaKnown RBP12.06□□□□□ -0.48
PTPRK-207ENST00000368226 SERPINA11Q86U17 422 aa12.06□□□□□ -0.48
PTPRK-207ENST00000368226 GRAMD2AQ8IUY3 354 aa12.06□□□□□ -0.48
PTPRK-207ENST00000368226 TM9SF4Q92544 642 aa12.06□□□□□ -0.48
PTPRK-207ENST00000368226 CREB3L1Q96BA8 519 aa12.06□□□□□ -0.48
PTPRK-207ENST00000368226 CDC6Q99741 560 aa12.06□□□□□ -0.48
PTPRK-207ENST00000368226 USB1Q9BQ65 265 aaKnown RBP12.06□□□□□ -0.48
PTPRK-207ENST00000368226 B3GNT2Q9NY97 397 aa12.06□□□□□ -0.48
PTPRK-207ENST00000368226 PCDHB10Q9UN67 800 aa12.06□□□□□ -0.48
PTPRK-207ENST00000368226 DDX60Q8IY21 1712 aaKnown RBP12.05□□□□□ -0.48
PTPRK-207ENST00000368226 CCDC163A0A0D9SF12 145 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 TRBV4-1A0A0J9YWV2 114 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 A6NIZ1 184 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 RAP1BP61224 184 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 RAP1AP62834 184 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 TNFRSF17Q02223 184 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 CAMK2DQ13557 499 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 CNTN4Q8IWV2 1026 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 MAELQ96JY0 434 aaKnown RBP12.05□□□□□ -0.48
PTPRK-207ENST00000368226 DPCDQ9BVM2 203 aaPredicted RBP12.05□□□□□ -0.48
PTPRK-207ENST00000368226 CALHM2Q9HA72 323 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 LINC01565O15544 149 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 SLC5A2P31639 672 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 CLDN17P56750 224 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 GABARAPL2P60520 117 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 ADARB1P78563 741 aaKnown RBP12.05□□□□□ -0.48
PTPRK-207ENST00000368226 ADIPOR2Q86V24 386 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 OR1J4Q8NGS1 313 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 GCDHQ92947 438 aaPredicted RBP12.05□□□□□ -0.48
PTPRK-207ENST00000368226 ARL6Q9H0F7 186 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 B3GNT3Q9Y2A9 372 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 HEMK1Q9Y5R4 338 aaPredicted RBP12.05□□□□□ -0.48
PTPRK-207ENST00000368226 GFRA2O00451 464 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 PENKP01210 267 aaPredicted RBP12.05□□□□□ -0.48
PTPRK-207ENST00000368226 PSPHP78330 225 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 EIF2S3LQ2VIR3 472 aaKnown RBP12.05□□□□□ -0.48
PTPRK-207ENST00000368226 TMEM240Q5SV17 173 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 SLC35D2Q76EJ3 337 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 TMEM150AQ86TG1 271 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 TEX19Q8NA77 164 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 SYNPRQ8TBG9 265 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 PRR14Q9BWN1 585 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 NRSN2Q9GZP1 204 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 UBQLN4Q9NRR5 601 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 TAS2R3Q9NYW6 316 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 ABRACLQ9P1F3 81 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 RGPD1P0DJD0 1748 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 BORCS7-ASMTA0A0B4J1R7 106 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 T-ENOLP0DO92 83 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 CD46P15529 392 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 RAB38P57729 211 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 SEC61A1P61619 476 aaKnown RBP12.05□□□□□ -0.48
PTPRK-207ENST00000368226 WBP2NLQ6ICG8 309 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 SLC2A12Q8TD20 617 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 PATE1Q8WXA2 126 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 RSC1A1Q92681 617 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 RRNAD1Q96FB5 475 aaKnown RBP12.05□□□□□ -0.48
PTPRK-207ENST00000368226 RANBP3Q9H6Z4 567 aaPredicted RBP12.05□□□□□ -0.48
PTPRK-207ENST00000368226 PCDHGA1Q9Y5H4 931 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 GMEB1Q9Y692 573 aa12.05□□□□□ -0.48
PTPRK-207ENST00000368226 BMP2P12643 396 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 KCNJ10P78508 379 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 DCDP81605 110 aaKnown RBP12.04□□□□□ -0.48
PTPRK-207ENST00000368226 MELKQ14680 651 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 ZNF181Q2M3W8 571 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 SPNS2Q8IVW8 549 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 TDHQ8IZJ6 230 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 MS4A15Q8N5U1 240 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 ULBP2Q9BZM5 246 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 NELFAQ9H3P2 528 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 DYNLRB1Q9NP97 96 aa12.04□□□□□ -0.48
PTPRK-207ENST00000368226 THAP10Q9P2Z0 257 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms