RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 ZFP41Q8N8Y5 198 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 OR52D1Q9H346 318 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 DPAGT1Q9H3H5 408 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 ZNF71Q9NQZ8 489 aaPredicted RBP10.81□□□□□ -0.68
SYNE1-204ENST00000367248 EXTL2Q9UBQ6 330 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 C12orf71A8MTZ7 269 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 MAS1P04201 325 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 CSNK1A1P48729 337 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 RAB2AP61019 212 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 LRRN1Q6UXK5 716 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 ZNF808Q8N4W9 903 aaPredicted RBP10.81□□□□□ -0.68
SYNE1-204ENST00000367248 DNTTIP1Q9H147 329 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 AASSQ9UDR5 926 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 TCHHQ07283 1943 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 BRWD1Q9NSI6 2320 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 CXorf51AA0A1B0GTR3 108 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 LRRN3E7EW58 273 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 ZNF182P17025 639 aaPredicted RBP10.81□□□□□ -0.68
SYNE1-204ENST00000367248 TNFSF4P23510 183 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.81□□□□□ -0.68
SYNE1-204ENST00000367248 TMEM236Q5W0B7 351 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 C3orf33Q6P1S2 294 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 CD300LGQ6UXG3 332 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 TM4SF18Q96CE8 201 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 KLHL15Q96M94 604 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 LRRN3Q9H3W5 708 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 ZNF696Q9H7X3 374 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 WASH6PQ9NQA3 447 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 TESQ9UGI8 421 aaKnown RBP10.81□□□□□ -0.68
SYNE1-204ENST00000367248 FBXL3Q9UKT7 428 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 ASCC3Q8N3C0 2202 aaKnown RBP10.81□□□□□ -0.68
SYNE1-204ENST00000367248 C13orf42A0A1B0GVH6 325 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 KRBA1A5PL33 1030 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 GFYI3L273 518 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 I6L893 689 aaPredicted RBP10.81□□□□□ -0.68
SYNE1-204ENST00000367248 CYB561P49447 251 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 MAN2A2P49641 1150 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 DAP3P51398 398 aaKnown RBP10.81□□□□□ -0.68
SYNE1-204ENST00000367248 GATAD2BQ8WXI9 593 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 C3orf49Q96BT1 292 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 GPR78Q96P69 363 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 VRK1Q99986 396 aaPredicted RBP10.81□□□□□ -0.68
SYNE1-204ENST00000367248 ST14Q9Y5Y6 855 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 MYF6P23409 242 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 NKX3-2P78367 333 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 ZMYND19Q96E35 227 aaPredicted RBP10.8□□□□□ -0.68
SYNE1-204ENST00000367248 ZNF583Q96ND8 569 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 WACQ9BTA9 647 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 GSKIPQ9P0R6 139 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 ZNF443Q9Y2A4 671 aaPredicted RBP10.8□□□□□ -0.68
SYNE1-204ENST00000367248 CMAHPQ9Y471 501 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 ATG4BQ9Y4P1 393 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 TARM1B6A8C7 271 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 RGS6P49758 472 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 LTC4SQ16873 150 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 FAM71E1Q6IPT2 247 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 NLRP8Q86W28 1048 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 ELP5Q8TE02 316 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 OR10A5Q9H207 317 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 MBD2Q9UBB5 411 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 TCRBV3S1A0A5B6 114 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 SLC19A2O60779 497 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 HSD17B7P56937 341 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 CASTOR1Q8WTX7 329 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 KCNE4Q8WWG9 221 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 HOXB13Q92826 284 aaPredicted RBP10.8□□□□□ -0.68
SYNE1-204ENST00000367248 LGALS12Q96DT0 336 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 TRPV4Q9HBA0 871 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 SCP2D1Q9UJQ7 156 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 ICKQ9UPZ9 632 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 CSNK1G3Q9Y6M4 447 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 UBFD1O14562 309 aaKnown RBP10.8□□□□□ -0.68
SYNE1-204ENST00000367248 ZNF264O43296 627 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 ERVK-25P63136 954 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 PRAMEF17Q5VTA0 474 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 MMP21Q8N119 569 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 ANKRD60Q9BZ19 345 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 CXorf36Q9H7Y0 433 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 NGBQ9NPG2 151 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 TRBV5-4A0A0C4DH59 114 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 A0A1B0GX78 115 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 DISC1C4P0D8 188 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 PLRG1O43660 514 aaKnown RBP10.8□□□□□ -0.68
SYNE1-204ENST00000367248 THBS2P35442 1172 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 RSU1Q15404 277 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 PROX2Q3B8N5 592 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 FAM205BPQ63HN1 556 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 C22orf42Q6IC83 251 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 KCTD9Q7L273 389 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 PRSS48Q7RTY5 328 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 ZFP90Q8TF47 636 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 ZNF707Q96C28 371 aaPredicted RBP10.8□□□□□ -0.68
SYNE1-204ENST00000367248 ISOC1Q96CN7 298 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 SPHK1Q9NYA1 384 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 SCN9AQ15858 1988 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 KLRC4-KLRK1H3BQV0 150 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 GLO1Q04760 184 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 SGCZQ96LD1 299 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 BEX2Q9BXY8 128 aa10.8□□□□□ -0.68
SYNE1-204ENST00000367248 BEX1Q9HBH7 125 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms