RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 NDUFB11Q9NX14 153 aa11.76□□□□□ -0.53
DFFB-202ENST00000339350 PCDHB10Q9UN67 800 aa11.76□□□□□ -0.53
DFFB-202ENST00000339350 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.75□□□□□ -0.53
DFFB-202ENST00000339350 ZNF879B4DU55 563 aa11.75□□□□□ -0.53
DFFB-202ENST00000339350 SUSD5O60279 629 aa11.75□□□□□ -0.53
DFFB-202ENST00000339350 DRD2P14416 443 aa11.75□□□□□ -0.53
DFFB-202ENST00000339350 S100A11P31949 105 aa11.75□□□□□ -0.53
DFFB-202ENST00000339350 PCGF2P35227 344 aa11.75□□□□□ -0.53
DFFB-202ENST00000339350 DIO1P49895 249 aa11.75□□□□□ -0.53
DFFB-202ENST00000339350 CDC42P60953 191 aa11.75□□□□□ -0.53
DFFB-202ENST00000339350 SIM1P81133 766 aaPredicted RBP11.75□□□□□ -0.53
DFFB-202ENST00000339350 COL9A2Q14055 689 aaPredicted RBP11.75□□□□□ -0.53
DFFB-202ENST00000339350 RNASE12Q5GAN4 147 aaKnown RBP11.75□□□□□ -0.53
DFFB-202ENST00000339350 TCEAL6Q6IPX3 200 aa11.75□□□□□ -0.53
DFFB-202ENST00000339350 RBM45Q8IUH3 476 aaKnown RBP11.75□□□□□ -0.53
DFFB-202ENST00000339350 IQCF1Q8N6M8 205 aa11.75□□□□□ -0.53
DFFB-202ENST00000339350 ZNF321PQ8N8H1 164 aa11.75□□□□□ -0.53
DFFB-202ENST00000339350 TMEM163Q8TC26 289 aa11.75□□□□□ -0.53
DFFB-202ENST00000339350 TM9SF4Q92544 642 aa11.75□□□□□ -0.53
DFFB-202ENST00000339350 KAT2AQ92830 837 aa11.75□□□□□ -0.53
DFFB-202ENST00000339350 THAP7Q9BT49 309 aaPredicted RBP11.75□□□□□ -0.53
DFFB-202ENST00000339350 CTPS2Q9NRF8 586 aa11.75□□□□□ -0.53
DFFB-202ENST00000339350 NKIRAS2Q9NYR9 191 aa11.75□□□□□ -0.53
DFFB-202ENST00000339350 C5AR2Q9P296 337 aa11.75□□□□□ -0.53
DFFB-202ENST00000339350 BACE2Q9Y5Z0 518 aa11.75□□□□□ -0.53
DFFB-202ENST00000339350 TRBV4-1A0A0J9YWV2 114 aa11.75□□□□□ -0.53
DFFB-202ENST00000339350 ABHD14A-ACY1A0A1B0GW23 586 aa11.75□□□□□ -0.53
DFFB-202ENST00000339350 TRBC2A0A5B9 178 aa11.75□□□□□ -0.53
DFFB-202ENST00000339350 BTBD17A6NE02 478 aa11.75□□□□□ -0.53
DFFB-202ENST00000339350 E9PQ18 207 aa11.75□□□□□ -0.53
DFFB-202ENST00000339350 TSPAN6O43657 245 aa11.75□□□□□ -0.53
DFFB-202ENST00000339350 ACRP10323 421 aa11.75□□□□□ -0.53
DFFB-202ENST00000339350 CALCRP30988 508 aa11.75□□□□□ -0.53
DFFB-202ENST00000339350 CSF2RBP32927 897 aa11.75□□□□□ -0.53
DFFB-202ENST00000339350 ZNF155Q12901 538 aaPredicted RBP11.75□□□□□ -0.53
DFFB-202ENST00000339350 TNFAIP8L2Q6P589 184 aaPredicted RBP11.75□□□□□ -0.53
DFFB-202ENST00000339350 ZSCAN1Q8NBB4 408 aa11.75□□□□□ -0.53
DFFB-202ENST00000339350 KCTD7Q96MP8 289 aa11.75□□□□□ -0.53
DFFB-202ENST00000339350 NTMQ9P121 344 aa11.75□□□□□ -0.53
DFFB-202ENST00000339350 STOX2Q9P2F5 926 aaPredicted RBP11.75□□□□□ -0.53
DFFB-202ENST00000339350 GFYI3L273 518 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 EEF1E1O43324 174 aaKnown RBP11.74□□□□□ -0.53
DFFB-202ENST00000339350 SOX30O94993 753 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 HOXC4P09017 264 aaPredicted RBP11.74□□□□□ -0.53
DFFB-202ENST00000339350 RAB4AP20338 218 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 DRD5P21918 477 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 NFYBP25208 207 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 NPBWR1P48145 328 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 RBP2P50120 134 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 UBE2IP63279 158 aaKnown RBP11.74□□□□□ -0.53
DFFB-202ENST00000339350 DEFB103AP81534 67 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 CDK6Q00534 326 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 GLO1Q04760 184 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 USF2Q15853 346 aaPredicted RBP11.74□□□□□ -0.53
DFFB-202ENST00000339350 SSX6Q7RTT6 188 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 REC114Q7Z4M0 266 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 ZNF740Q8NDX6 193 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 RAB8BQ92930 207 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 SLC25A28Q96A46 364 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 RFT1Q96AA3 541 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 VOPP1Q96AW1 172 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 TCEAL4Q96EI5 215 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 CHFRQ96EP1 664 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 C1GALT1C1Q96EU7 318 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 WFDC6Q9BQY6 131 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 LSM2Q9Y333 95 aaKnown RBP11.74□□□□□ -0.53
DFFB-202ENST00000339350 NUBP2Q9Y5Y2 271 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 WDR87Q6ZQQ6 2873 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 CCDC163A0A0D9SF12 145 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 AGAP14A8MT82 685 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 FOXE1O00358 373 aaPredicted RBP11.74□□□□□ -0.53
DFFB-202ENST00000339350 CASKO14936 926 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 PIP5K1CO60331 668 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 ZNF44P15621 663 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 NQO2P16083 231 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 ADCYAP1P18509 176 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 NPR2P20594 1047 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 PTGER1P34995 402 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 SPINT3P49223 89 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 VEGFBP49765 207 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 RAB2AP61019 212 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 LSM11P83369 360 aaKnown RBP eCLIP11.74□□□□□ -0.53
DFFB-202ENST00000339350 PRR5P85299 388 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 B3GNTL1Q67FW5 361 aaPredicted RBP11.74□□□□□ -0.53
DFFB-202ENST00000339350 LIN54Q6MZP7 749 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 GSG1LQ6UXU4 331 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 B3GLCTQ6Y288 498 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 TMUB2Q71RG4 321 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 HSD11B1LQ7Z5J1 315 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 TMEM185AQ8NFB2 350 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 OR2L5Q8NG80 312 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 S100PBPQ96BU1 408 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 ENAMQ9NRM1 1142 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 NPTNQ9Y639 398 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 KNL1Q8NG31 2342 aa11.74□□□□□ -0.53
DFFB-202ENST00000339350 FZD7O75084 574 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 SLC34A2O95436 690 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 LIM2P55344 173 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 TAS2R50P59544 299 aa11.73□□□□□ -0.53
DFFB-202ENST00000339350 LIPJQ5W064 366 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms