RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 TMCO6Q96DC7 493 aa12.92□□□□□ -0.34
SS18-201ENST00000269137 CCNL2Q96S94 520 aaPredicted RBP12.92□□□□□ -0.34
SS18-201ENST00000269137 RTN4RQ9BZR6 473 aa12.92□□□□□ -0.34
SS18-201ENST00000269137 RPS6KB2Q9UBS0 482 aa12.92□□□□□ -0.34
SS18-201ENST00000269137 CARD8Q9Y2G2 431 aa12.92□□□□□ -0.34
SS18-201ENST00000269137 ADAM10O14672 748 aa12.91□□□□□ -0.34
SS18-201ENST00000269137 OR2J2O76002 312 aa12.91□□□□□ -0.34
SS18-201ENST00000269137 OR6B1O95007 311 aa12.91□□□□□ -0.34
SS18-201ENST00000269137 NTN1O95631 604 aa12.91□□□□□ -0.34
SS18-201ENST00000269137 FBXO45P0C2W1 286 aa12.91□□□□□ -0.34
SS18-201ENST00000269137 OTX2P32243 289 aa12.91□□□□□ -0.34
SS18-201ENST00000269137 DLSTP36957 453 aa12.91□□□□□ -0.34
SS18-201ENST00000269137 FBXW4P57775 412 aa12.91□□□□□ -0.34
SS18-201ENST00000269137 ALG10BQ5I7T1 473 aa12.91□□□□□ -0.34
SS18-201ENST00000269137 WBP2NLQ6ICG8 309 aa12.91□□□□□ -0.34
SS18-201ENST00000269137 CBLN3Q6UW01 205 aa12.91□□□□□ -0.34
SS18-201ENST00000269137 Q6ZPB1 254 aaPredicted RBP12.91□□□□□ -0.34
SS18-201ENST00000269137 MARCH3Q86UD3 253 aa12.91□□□□□ -0.34
SS18-201ENST00000269137 GRHL3Q8TE85 626 aa12.91□□□□□ -0.34
SS18-201ENST00000269137 ARSGQ96EG1 525 aa12.91□□□□□ -0.34
SS18-201ENST00000269137 SELENONQ9NZV5 590 aa12.91□□□□□ -0.34
SS18-201ENST00000269137 DMXL1Q9Y485 3027 aa12.91□□□□□ -0.34
SS18-201ENST00000269137 ANGPTL1O95841 491 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 HPP00738 406 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 SMIM18P0DKX4 95 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 F8A1P23610 371 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 PAX7P23759 505 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 CTBP2P56545 445 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 GABREP78334 506 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 IL5RAQ01344 420 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 ZNF117Q03924 483 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 PRKCDQ05655 676 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 CDK5R2Q13319 367 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 MEP1AQ16819 746 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 CTU2Q2VPK5 515 aaKnown RBP12.9□□□□□ -0.34
SS18-201ENST00000269137 RBM48Q5RL73 367 aaKnown RBP12.9□□□□□ -0.34
SS18-201ENST00000269137 C6orf141Q5SZD1 244 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 ISLR2Q6UXK2 745 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 RASSF6Q6ZTQ3 369 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 DEPDC4Q8N2C3 294 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 CADM2Q8N3J6 435 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 ADAMTS14Q8WXS8 1223 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 FAM46AQ96IP4 442 aaKnown RBP12.9□□□□□ -0.34
SS18-201ENST00000269137 RASL10BQ96S79 203 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 FAM192AQ9GZU8 254 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 ZNF160Q9HCG1 818 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 ICAM5Q9UMF0 924 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 HCRTR2O43614 444 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 CELA2AP08217 269 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 ELK4P28324 431 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 CXCR4P61073 352 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 TOP3AQ13472 1001 aaPredicted RBP12.9□□□□□ -0.34
SS18-201ENST00000269137 MAD2L1BPQ15013 274 aaPredicted RBP12.9□□□□□ -0.34
SS18-201ENST00000269137 NTRK2Q16620 822 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 LAIR2Q6ISS4 152 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 IGF2-ASQ6U949 168 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 GALNT15Q8N3T1 639 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 OR5W2Q8NH69 310 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 C3orf49Q96BT1 292 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 NODALQ96S42 347 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 CNIH4Q9P003 139 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 TMEM5Q9Y2B1 443 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 YARS2Q9Y2Z4 477 aaKnown RBP12.9□□□□□ -0.34
SS18-201ENST00000269137 MED31Q9Y3C7 131 aa12.9□□□□□ -0.34
SS18-201ENST00000269137 PTPRBP23467 1997 aa12.89□□□□□ -0.35
SS18-201ENST00000269137 A0A087WUJ7 227 aa12.89□□□□□ -0.35
SS18-201ENST00000269137 LOC101059948A0A1B0GTJ6 334 aa12.89□□□□□ -0.35
SS18-201ENST00000269137 CDRT15L2A8MXV6 281 aa12.89□□□□□ -0.35
SS18-201ENST00000269137 PIP5K1CO60331 668 aa12.89□□□□□ -0.35
SS18-201ENST00000269137 SOX14O95416 240 aa12.89□□□□□ -0.35
SS18-201ENST00000269137 POU1F1P28069 291 aa12.89□□□□□ -0.35
SS18-201ENST00000269137 RBMS1P29558 406 aaKnown RBP12.89□□□□□ -0.35
SS18-201ENST00000269137 IDH2P48735 452 aaKnown RBP12.89□□□□□ -0.35
SS18-201ENST00000269137 NOVA1P51513 510 aaKnown RBP12.89□□□□□ -0.35
SS18-201ENST00000269137 CDC42P60953 191 aa12.89□□□□□ -0.35
SS18-201ENST00000269137 TEKQ02763 1124 aa12.89□□□□□ -0.35
SS18-201ENST00000269137 APOFQ13790 326 aa12.89□□□□□ -0.35
SS18-201ENST00000269137 ZNF791Q3KP31 576 aaPredicted RBP12.89□□□□□ -0.35
SS18-201ENST00000269137 FOXB2Q5VYV0 432 aa12.89□□□□□ -0.35
SS18-201ENST00000269137 SLX4IPQ5VYV7 408 aa12.89□□□□□ -0.35
SS18-201ENST00000269137 TMPRSS11FQ6ZWK6 438 aa12.89□□□□□ -0.35
SS18-201ENST00000269137 MRGPREQ86SM8 312 aa12.89□□□□□ -0.35
SS18-201ENST00000269137 TMCO5AQ8N6Q1 288 aa12.89□□□□□ -0.35
SS18-201ENST00000269137 CLDN22Q8N7P3 220 aa12.89□□□□□ -0.35
SS18-201ENST00000269137 TSPAN14Q8NG11 270 aa12.89□□□□□ -0.35
SS18-201ENST00000269137 RHOXF1Q8NHV9 184 aa12.89□□□□□ -0.35
SS18-201ENST00000269137 RNF217Q8TC41 542 aa12.89□□□□□ -0.35
SS18-201ENST00000269137 NKD1Q969G9 470 aa12.89□□□□□ -0.35
SS18-201ENST00000269137 ZNF566Q969W8 418 aa12.89□□□□□ -0.35
SS18-201ENST00000269137 SPACA9Q96E40 222 aaPredicted RBP12.89□□□□□ -0.35
SS18-201ENST00000269137 PHOX2BQ99453 314 aa12.89□□□□□ -0.35
SS18-201ENST00000269137 MRPS26Q9BYN8 205 aaKnown RBP12.89□□□□□ -0.35
SS18-201ENST00000269137 C12orf10Q9HB07 376 aa12.89□□□□□ -0.35
SS18-201ENST00000269137 P4HTMQ9NXG6 502 aa12.89□□□□□ -0.35
SS18-201ENST00000269137 FBXL4Q9UKA2 621 aa12.89□□□□□ -0.35
SS18-201ENST00000269137 HTR3EA5X5Y0 456 aa12.88□□□□□ -0.35
SS18-201ENST00000269137 H3BN98 237 aa12.88□□□□□ -0.35
SS18-201ENST00000269137 SCO2O43819 266 aa12.88□□□□□ -0.35
SS18-201ENST00000269137 ITGA10O75578 1167 aa12.88□□□□□ -0.35
SS18-201ENST00000269137 IGFBP1P08833 259 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms