RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 ZNF649Q9BS31 505 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 GPR174Q9BXC1 333 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 METTL17Q9H7H0 456 aaPredicted RBP11.51□□□□□ -0.57
CHMP3-201ENST00000263856 CALML5Q9NZT1 146 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 DPP7Q9UHL4 492 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 U3KQ87 197 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 RIIAD1A6NNX1 92 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 SLC9A3R1O14745 358 aaPredicted RBP11.51□□□□□ -0.57
CHMP3-201ENST00000263856 SLC31A1O15431 190 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 TBX19O60806 448 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 IGHA1P01876 353 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 RBMS1P29558 406 aaKnown RBP11.51□□□□□ -0.57
CHMP3-201ENST00000263856 ST3GAL2Q16842 350 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 GET4Q7L5D6 327 aaPredicted RBP11.51□□□□□ -0.57
CHMP3-201ENST00000263856 FTMTQ8N4E7 242 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 OR4K13Q8NH42 304 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 HS6ST2Q96MM7 605 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 PTCHD1Q96NR3 888 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 PDCD1LG2Q9BQ51 273 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 RBCK1Q9BYM8 510 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 GNG8Q9UK08 70 aa11.51□□□□□ -0.57
CHMP3-201ENST00000263856 EXOGQ9Y2C4 368 aaKnown RBP11.51□□□□□ -0.57
CHMP3-201ENST00000263856 COL4A3Q01955 1670 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 SOX30O94993 753 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 CFL1P23528 166 aaKnown RBP11.5□□□□□ -0.57
CHMP3-201ENST00000263856 BTCP35070 178 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 POU6F2P78424 691 aaPredicted RBP11.5□□□□□ -0.57
CHMP3-201ENST00000263856 FOXK2Q01167 660 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 SNTA1Q13424 505 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 FZD5Q13467 585 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 EXOSC7Q15024 291 aaKnown RBP11.5□□□□□ -0.57
CHMP3-201ENST00000263856 PYHIN1Q6K0P9 492 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 VWCEQ96DN2 955 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 DNAJA3Q96EY1 480 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 OR14A2Q96R54 314 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 TEAD3Q99594 435 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 MENTQ9BUN1 341 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 C1QTNF2Q9BXJ5 285 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 ZFP64Q9NPA5 681 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 SERGEFQ9UGK8 458 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 ADAM29Q9UKF5 820 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 NUP210Q8TEM1 1887 aaPredicted RBP11.5□□□□□ -0.57
CHMP3-201ENST00000263856 A0A1B0GVT2 93 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 ANKRD61A6NGH8 418 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 TSPAN4O14817 238 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 WNT1P04628 370 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 ATF1P18846 271 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 PKLRP30613 574 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 RAB14P61106 215 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 DPTQ07507 201 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 IRF4Q15306 451 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 OR1Q1Q15612 314 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 TMEM44Q2T9K0 475 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 SLC25A25Q6KCM7 469 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 HDDC3Q8N4P3 179 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 COX18Q8N8Q8 333 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 OR2L3Q8NG85 312 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 OR6K6Q8NGW6 343 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 DERL3Q96Q80 235 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 RANBP3Q9H6Z4 567 aaPredicted RBP11.5□□□□□ -0.57
CHMP3-201ENST00000263856 RCE1Q9Y256 329 aa11.5□□□□□ -0.57
CHMP3-201ENST00000263856 ABHD14A-ACY1A0A1B0GW23 586 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 POM121CA8CG34 1229 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 LRRN3E7EW58 273 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 SYT5O00445 386 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 PDGFAP04085 211 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 ANKRD34CP0C6C1 535 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 PRKACBP22694 351 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 BMP8BP34820 402 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 HSD17B2P37059 387 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 TSPAN5P62079 268 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 C19orf57Q0VDD7 668 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 EXOSC2Q13868 293 aaKnown RBP11.49□□□□□ -0.57
CHMP3-201ENST00000263856 MLC1Q15049 377 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 NNATQ16517 81 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 ODF4Q2M2E3 257 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 HYAL4Q2M3T9 481 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 MFSD12Q6NUT3 480 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 TMEM64Q6YI46 380 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 BMP8AQ7Z5Y6 402 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 NRROSQ86YC3 692 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 LRRC25Q8N386 305 aaPredicted RBP11.49□□□□□ -0.57
CHMP3-201ENST00000263856 OR52E2Q8NGJ4 325 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 RPLP0P6Q8NHW5 317 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 SFXN5Q8TD22 340 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 ZNF296Q8WUU4 475 aaPredicted RBP11.49□□□□□ -0.57
CHMP3-201ENST00000263856 SNX33Q8WV41 574 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 PTP4A1Q93096 173 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 BPIFA2Q96DR5 249 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.49□□□□□ -0.57
CHMP3-201ENST00000263856 LRRN3Q9H3W5 708 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 NT5DC2Q9H857 520 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 SPEGQ15772 3267 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 KHDRBS3O75525 346 aaKnown RBP11.49□□□□□ -0.57
CHMP3-201ENST00000263856 ADRB1P08588 477 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 ATF4P18848 351 aaPredicted RBP11.49□□□□□ -0.57
CHMP3-201ENST00000263856 NPR2P20594 1047 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 HTR2AP28223 471 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 SEC13P55735 322 aa11.49□□□□□ -0.57
CHMP3-201ENST00000263856 FXYD6P3P58550 94 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms