RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 SAMD8Q96LT4 415 aa9.24□□□□□ -0.93
USP11-201ENST00000218348 LMF1Q96S06 567 aa9.24□□□□□ -0.93
USP11-201ENST00000218348 PINK1Q9BXM7 581 aa9.24□□□□□ -0.93
USP11-201ENST00000218348 PCDHGB1Q9Y5G3 927 aa9.24□□□□□ -0.93
USP11-201ENST00000218348 A0A1W2PRQ8 180 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 PRSS44E7EML9 344 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 DPM1O60762 260 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 NOS1APO75052 506 aaPredicted RBP9.23□□□□□ -0.93
USP11-201ENST00000218348 UBXN7O94888 489 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 RNF224P0DH78 156 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 UBE2IP63279 158 aaKnown RBP9.23□□□□□ -0.93
USP11-201ENST00000218348 MINDY4Q4G0A6 757 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 KLHL12Q53G59 568 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 DCST2Q5T1A1 773 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 ARMC4Q5T2S8 1044 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 TSSK4Q6SA08 328 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 CYP4Z2PQ8N1L4 340 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 CA13Q8N1Q1 262 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 ZNF655Q8N720 491 aaPredicted RBP9.23□□□□□ -0.93
USP11-201ENST00000218348 DYNC2LI1Q8TCX1 351 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.23□□□□□ -0.93
USP11-201ENST00000218348 TM4SF19Q96DZ7 209 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 RBM18Q96H35 190 aaKnown RBP9.23□□□□□ -0.93
USP11-201ENST00000218348 DACH2Q96NX9 599 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 SYNDIG1Q9H7V2 258 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 SNTG1Q9NSN8 517 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 C20orf141Q9NUB4 165 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 CACNA1EQ15878 2313 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 LRRN3E7EW58 273 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 MYL12BO14950 172 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 TBX1O43435 398 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 SULT1B1O43704 296 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 GALR3O60755 368 aaPredicted RBP9.23□□□□□ -0.93
USP11-201ENST00000218348 GPR75O95800 540 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 SAGP10523 405 aaPredicted RBP9.23□□□□□ -0.93
USP11-201ENST00000218348 PCP4P48539 62 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 CAV3P56539 151 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 SMIM11AP58511 58 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 LARS2Q15031 903 aaKnown RBP9.23□□□□□ -0.93
USP11-201ENST00000218348 TRAM2Q15035 370 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 TBCEQ15813 527 aaPredicted RBP9.23□□□□□ -0.93
USP11-201ENST00000218348 SYT14P1Q58G82 188 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 PDZK1Q5T2W1 519 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 DESI1Q6ICB0 168 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 CYB561A3Q8NBI2 242 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 ZBTB44Q8NCP5 570 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 OR9Q1Q8NGQ5 310 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 CNOT9Q92600 299 aaKnown RBP9.23□□□□□ -0.93
USP11-201ENST00000218348 SNAPC3Q92966 411 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 TRMT61AQ96FX7 289 aaKnown RBP9.23□□□□□ -0.93
USP11-201ENST00000218348 TRNT1Q96Q11 434 aaKnown RBP9.23□□□□□ -0.93
USP11-201ENST00000218348 OR2B2Q9GZK3 357 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 LRRN3Q9H3W5 708 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 FSCN3Q9NQT6 498 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 POT1Q9NUX5 634 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 ZSCAN32Q9NX65 697 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 DHCR7Q9UBM7 475 aaKnown RBP9.23□□□□□ -0.93
USP11-201ENST00000218348 GPR179Q6PRD1 2367 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 CDC14CA4D256 554 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 CYR61O00622 381 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 CTDSP2O14595 271 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 DYRK3O43781 588 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 CSO75390 466 aaKnown RBP9.23□□□□□ -0.93
USP11-201ENST00000218348 RPLP0P05388 317 aaKnown RBP9.23□□□□□ -0.93
USP11-201ENST00000218348 GYPBP06028 91 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 PSKH1P11801 424 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 ZNF10P21506 573 aaPredicted RBP9.23□□□□□ -0.93
USP11-201ENST00000218348 AZGP1P25311 298 aaKnown RBP9.23□□□□□ -0.93
USP11-201ENST00000218348 ETV5P41161 510 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 CCR4P51679 360 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 ST3GAL3Q11203 375 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 INSL4Q14641 139 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 TBRG1Q3YBR2 411 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 SLX4IPQ5VYV7 408 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 WDR88Q6ZMY6 472 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 SLC46A3Q7Z3Q1 461 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 C1orf210Q8IVY1 113 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 DTWD2Q8NBA8 298 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 SFXN5Q8TD22 340 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 CNDP2Q96KP4 475 aaKnown RBP9.23□□□□□ -0.93
USP11-201ENST00000218348 CMTM3Q96MX0 182 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 SPRTNQ9H040 489 aaPredicted RBP9.23□□□□□ -0.93
USP11-201ENST00000218348 BCL2L10Q9HD36 194 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 SPIN1Q9Y657 262 aaPredicted RBP9.23□□□□□ -0.93
USP11-201ENST00000218348 HS3ST3A1Q9Y663 406 aa9.23□□□□□ -0.93
USP11-201ENST00000218348 TRAV27A0A087WT01 109 aa9.22□□□□□ -0.93
USP11-201ENST00000218348 IGHV5-51A0A0C4DH38 117 aa9.22□□□□□ -0.93
USP11-201ENST00000218348 EFCAB10A6NFE3 127 aa9.22□□□□□ -0.93
USP11-201ENST00000218348 TGFBR3LH3BV60 316 aa9.22□□□□□ -0.93
USP11-201ENST00000218348 MRPL3P09001 348 aaKnown RBP9.22□□□□□ -0.93
USP11-201ENST00000218348 HBQ1P09105 142 aa9.22□□□□□ -0.93
USP11-201ENST00000218348 ZNF250P15622 560 aa9.22□□□□□ -0.93
USP11-201ENST00000218348 TGM1P22735 817 aa9.22□□□□□ -0.93
USP11-201ENST00000218348 ACVR2AP27037 513 aa9.22□□□□□ -0.93
USP11-201ENST00000218348 RPS7P62081 194 aaKnown RBP9.22□□□□□ -0.93
USP11-201ENST00000218348 CDK10Q15131 360 aa9.22□□□□□ -0.93
USP11-201ENST00000218348 SSX1Q16384 188 aa9.22□□□□□ -0.93
USP11-201ENST00000218348 ZNF791Q3KP31 576 aaPredicted RBP9.22□□□□□ -0.93
USP11-201ENST00000218348 FLYWCH1Q4VC44 716 aa9.22□□□□□ -0.93
USP11-201ENST00000218348 Q5BKY6 102 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms