RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 GPX2P18283 190 aa15.68■□□□□ 0.1
MRPL28-201ENST00000199706 PGCP20142 388 aa15.68■□□□□ 0.1
MRPL28-201ENST00000199706 CTSSP25774 331 aa15.68■□□□□ 0.1
MRPL28-201ENST00000199706 GRNP28799 593 aaKnown RBP15.68■□□□□ 0.1
MRPL28-201ENST00000199706 ZNF136P52737 540 aa15.68■□□□□ 0.1
MRPL28-201ENST00000199706 SRYQ05066 204 aa15.68■□□□□ 0.1
MRPL28-201ENST00000199706 FOXF1Q12946 379 aa15.68■□□□□ 0.1
MRPL28-201ENST00000199706 SP5Q6BEB4 398 aaPredicted RBP15.68■□□□□ 0.1
MRPL28-201ENST00000199706 DLEU7Q6UYE1 221 aa15.68■□□□□ 0.1
MRPL28-201ENST00000199706 CHMP1BQ7LBR1 199 aa15.68■□□□□ 0.1
MRPL28-201ENST00000199706 GRAMD2AQ8IUY3 354 aa15.68■□□□□ 0.1
MRPL28-201ENST00000199706 PEX5LQ8IYB4 626 aa15.68■□□□□ 0.1
MRPL28-201ENST00000199706 C9orf106Q8NAJ2 232 aa15.68■□□□□ 0.1
MRPL28-201ENST00000199706 SLC35B4Q969S0 331 aa15.68■□□□□ 0.1
MRPL28-201ENST00000199706 VAPAQ9P0L0 249 aa15.68■□□□□ 0.1
MRPL28-201ENST00000199706 FOXD3Q9UJU5 478 aaPredicted RBP15.68■□□□□ 0.1
MRPL28-201ENST00000199706 ABCA12Q86UK0 2595 aa15.68■□□□□ 0.1
MRPL28-201ENST00000199706 APCP25054 2843 aa15.67■□□□□ 0.1
MRPL28-201ENST00000199706 A0A0G2JPF8 293 aa15.67■□□□□ 0.1
MRPL28-201ENST00000199706 SLC22A20A6NK97 555 aa15.67■□□□□ 0.1
MRPL28-201ENST00000199706 KDM4EB2RXH2 506 aaPredicted RBP15.67■□□□□ 0.1
MRPL28-201ENST00000199706 HNRNPCL2B2RXH8 293 aa15.67■□□□□ 0.1
MRPL28-201ENST00000199706 HNRNPCL3B7ZW38 293 aa15.67■□□□□ 0.1
MRPL28-201ENST00000199706 HNRNPCL1O60812 293 aaKnown RBP15.67■□□□□ 0.1
MRPL28-201ENST00000199706 NUDT14O95848 222 aa15.67■□□□□ 0.1
MRPL28-201ENST00000199706 SNRPB2P08579 225 aaKnown RBP15.67■□□□□ 0.1
MRPL28-201ENST00000199706 HNRNPCL4P0DMR1 293 aa15.67■□□□□ 0.1
MRPL28-201ENST00000199706 TCEA1P23193 301 aaKnown RBP15.67■□□□□ 0.1
MRPL28-201ENST00000199706 PCYT1AP49585 367 aa15.67■□□□□ 0.1
MRPL28-201ENST00000199706 SUCLG1P53597 346 aaKnown RBP15.67■□□□□ 0.1
MRPL28-201ENST00000199706 CLDN20P56880 219 aa15.67■□□□□ 0.1
MRPL28-201ENST00000199706 SELENBP1Q13228 472 aa15.67■□□□□ 0.1
MRPL28-201ENST00000199706 QPRTQ15274 297 aa15.67■□□□□ 0.1
MRPL28-201ENST00000199706 CTU2Q2VPK5 515 aaKnown RBP15.67■□□□□ 0.1
MRPL28-201ENST00000199706 RNF220Q5VTB9 566 aa15.67■□□□□ 0.1
MRPL28-201ENST00000199706 ZNF440Q8IYI8 595 aa15.67■□□□□ 0.1
MRPL28-201ENST00000199706 TMCO5AQ8N6Q1 288 aa15.67■□□□□ 0.1
MRPL28-201ENST00000199706 OR5M1Q8NGP8 315 aa15.67■□□□□ 0.1
MRPL28-201ENST00000199706 WDR60Q8WVS4 1066 aa15.67■□□□□ 0.1
MRPL28-201ENST00000199706 ZG16BQ96DA0 208 aa15.67■□□□□ 0.1
MRPL28-201ENST00000199706 KLHDC3Q9BQ90 382 aa15.67■□□□□ 0.1
MRPL28-201ENST00000199706 TMEM38AQ9H6F2 299 aa15.67■□□□□ 0.1
MRPL28-201ENST00000199706 ACER3Q9NUN7 267 aa15.67■□□□□ 0.1
MRPL28-201ENST00000199706 JKAMPQ9P055 326 aa15.67■□□□□ 0.1
MRPL28-201ENST00000199706 CDHR4A6H8M9 788 aa15.66■□□□□ 0.1
MRPL28-201ENST00000199706 FAM90A27PA6NNH2 459 aa15.66■□□□□ 0.1
MRPL28-201ENST00000199706 BBIP1A8MTZ0 92 aa15.66■□□□□ 0.1
MRPL28-201ENST00000199706 EVPLLA8MZ36 301 aa15.66■□□□□ 0.1
MRPL28-201ENST00000199706 GMFGO60234 142 aa15.66■□□□□ 0.1
MRPL28-201ENST00000199706 NPPAP01160 153 aa15.66■□□□□ 0.1
MRPL28-201ENST00000199706 UBTFL6P0CB48 400 aaPredicted RBP15.66■□□□□ 0.1
MRPL28-201ENST00000199706 TMIGD3P0DMS9 266 aaPredicted RBP15.66■□□□□ 0.1
MRPL28-201ENST00000199706 ARAFP10398 606 aa15.66■□□□□ 0.1
MRPL28-201ENST00000199706 ETS2P15036 469 aa15.66■□□□□ 0.1
MRPL28-201ENST00000199706 FKBP2P26885 142 aaKnown RBP15.66■□□□□ 0.1
MRPL28-201ENST00000199706 ASCL1P50553 236 aa15.66■□□□□ 0.1
MRPL28-201ENST00000199706 MAP2K6P52564 334 aa15.66■□□□□ 0.1
MRPL28-201ENST00000199706 PLAURQ03405 335 aa15.66■□□□□ 0.1
MRPL28-201ENST00000199706 MAPRE2Q15555 327 aa15.66■□□□□ 0.1
MRPL28-201ENST00000199706 NDUFAF6Q330K2 333 aa15.66■□□□□ 0.1
MRPL28-201ENST00000199706 LIN52Q52LA3 116 aa15.66■□□□□ 0.1
MRPL28-201ENST00000199706 PDSS1Q5T2R2 415 aa15.66■□□□□ 0.1
MRPL28-201ENST00000199706 OLIG3Q7RTU3 272 aa15.66■□□□□ 0.1
MRPL28-201ENST00000199706 DHDDSQ86SQ9 333 aa15.66■□□□□ 0.1
MRPL28-201ENST00000199706 LIX1LQ8IVB5 337 aa15.66■□□□□ 0.1
MRPL28-201ENST00000199706 UBQLNLQ8IYU4 475 aa15.66■□□□□ 0.1
MRPL28-201ENST00000199706 RELL2Q8NC24 303 aaPredicted RBP15.66■□□□□ 0.1
MRPL28-201ENST00000199706 BBS10Q8TAM1 723 aa15.66■□□□□ 0.1
MRPL28-201ENST00000199706 SLC25A43Q8WUT9 341 aaPredicted RBP15.66■□□□□ 0.1
MRPL28-201ENST00000199706 LRRC46Q96FV0 321 aa15.66■□□□□ 0.1
MRPL28-201ENST00000199706 TMEM19Q96HH6 336 aa15.66■□□□□ 0.1
MRPL28-201ENST00000199706 KLHL15Q96M94 604 aa15.66■□□□□ 0.1
MRPL28-201ENST00000199706 CPPED1Q9BRF8 314 aaPredicted RBP15.66■□□□□ 0.1
MRPL28-201ENST00000199706 PIGMQ9H3S5 423 aa15.66■□□□□ 0.1
MRPL28-201ENST00000199706 RNF122Q9H9V4 155 aa15.66■□□□□ 0.1
MRPL28-201ENST00000199706 NPDC1Q9NQX5 325 aaPredicted RBP15.66■□□□□ 0.1
MRPL28-201ENST00000199706 SAR1AQ9NR31 198 aa15.66■□□□□ 0.1
MRPL28-201ENST00000199706 DNAJB12Q9NXW2 375 aaKnown RBP15.66■□□□□ 0.1
MRPL28-201ENST00000199706 SLAMF8Q9P0V8 285 aa15.66■□□□□ 0.1
MRPL28-201ENST00000199706 SHISA8B8ZZ34 492 aa15.65■□□□□ 0.1
MRPL28-201ENST00000199706 DYNC1I1O14576 645 aa15.65■□□□□ 0.1
MRPL28-201ENST00000199706 SEC14L5O43304 696 aa15.65■□□□□ 0.1
MRPL28-201ENST00000199706 BCHEP06276 602 aa15.65■□□□□ 0.1
MRPL28-201ENST00000199706 COX6B1P14854 86 aa15.65■□□□□ 0.1
MRPL28-201ENST00000199706 UQCRBP14927 111 aa15.65■□□□□ 0.1
MRPL28-201ENST00000199706 IL7RP16871 459 aa15.65■□□□□ 0.1
MRPL28-201ENST00000199706 COL8A1P27658 744 aa15.65■□□□□ 0.1
MRPL28-201ENST00000199706 HTR3AP46098 478 aa15.65■□□□□ 0.1
MRPL28-201ENST00000199706 CCR4P51679 360 aa15.65■□□□□ 0.1
MRPL28-201ENST00000199706 LARS2Q15031 903 aaKnown RBP15.65■□□□□ 0.1
MRPL28-201ENST00000199706 GUSBP1Q15486 140 aa15.65■□□□□ 0.1
MRPL28-201ENST00000199706 TOMM34Q15785 309 aaPredicted RBP15.65■□□□□ 0.1
MRPL28-201ENST00000199706 GCNT6Q5T4J0 391 aa15.65■□□□□ 0.1
MRPL28-201ENST00000199706 C3orf33Q6P1S2 294 aa15.65■□□□□ 0.1
MRPL28-201ENST00000199706 RETREG3Q86VR2 466 aa15.65■□□□□ 0.1
MRPL28-201ENST00000199706 LILRA2Q8N149 483 aa15.65■□□□□ 0.1
MRPL28-201ENST00000199706 OR2V1Q8NHB1 315 aa15.65■□□□□ 0.1
MRPL28-201ENST00000199706 FBXO27Q8NI29 283 aa15.65■□□□□ 0.1
MRPL28-201ENST00000199706 C10orf82Q8WW14 230 aa15.65■□□□□ 0.1
MRPL28-201ENST00000199706 ANKRD27Q96NW4 1050 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms