RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Scn3bQ8BHK2 215 aa19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Rae1Q8C570 368 aaKnown RBP19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Rhno1Q8K3A4 235 aa19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Il17rcQ8K4C2 698 aa19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Mmd2Q8R189 247 aa19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Rmnd5bQ91YQ7 393 aa19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Gje1Q9CX92 205 aa19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Gm10762Q9CZN6 115 aa19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Defb5Q9EPV9 64 aa19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Nusap1Q9ERH4 427 aaKnown RBP19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Zscan12Q9Z1D7 501 aa19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Ccrl2O35457 360 aa19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Bcat2O35855 393 aa19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Lancl1O89112 399 aa19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Slc2a2P14246 523 aa19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Slc16a3P57787 470 aa19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Rgs14P97492 547 aa19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Olfr146Q60884 306 aa19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Morn4Q6PGF2 146 aa19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Tas2r140Q7TQA4 312 aa19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Rsbn1Q80T69 795 aa19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Prps1l1Q8C5R8 318 aa19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Thap1Q8CHW1 210 aa19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Mchr1Q8JZL2 353 aa19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Tmem203Q8R235 136 aa19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Akr1d1Q8VCX1 325 aa19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Olfr350Q8VFP8 312 aa19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Pcdh18Q8VHR0 1134 aa19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Slc25a37Q920G8 338 aa19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Chmp1b1Q99LU0 199 aa19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Sec23bQ9D662 767 aa19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Tmem38bQ9DAV9 292 aa19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Znf207Q9JMD0 495 aaKnown RBP19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Dkk3Q9QUN9 349 aa19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Cldn14Q9Z0S3 239 aa19.56■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Bod1lE9Q6J5 3032 aa19.55■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Ighv1-42A0A0A6YY38 117 aa19.55■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Olfr1303A2AVW1 312 aa19.55■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Lrr1D3YY91 422 aa19.55■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Gm28048F7BCN0 99 aa19.55■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Tmem200cJ3QK46 637 aa19.55■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 FxnO35943 207 aa19.55■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Psmb10O35955 273 aa19.55■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Hoxc5P32043 222 aa19.55■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 TpoP35419 914 aa19.55■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Cd59bP58019 129 aa19.55■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Gpat2Q14DK4 801 aa19.55■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Il18r1Q61098 537 aa19.55■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Mtch2Q791V5 303 aa19.55■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Cpeb4Q7TN98 729 aaKnown RBP19.55■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Ccdc126Q8BIS8 140 aa19.55■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Acaa2Q8BWT1 397 aa19.55■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Tns4Q8BZ33 696 aa19.55■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Ntng1Q8R4G0 539 aa19.55■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Mto1Q923Z3 669 aa19.55■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Ckap5A2AGT5 2032 aaKnown RBP19.55■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Esp36G3UZD8 160 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Clk3O35492 638 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 PlaaP27612 794 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Nsg2P47759 171 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Rspo3Q2TJ95 277 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Pydc3Q3V3Q4 588 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Tspan7Q62283 249 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 LcorQ6ZPI3 433 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Efcab3Q80X60 432 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Arhgap28Q8BN58 729 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Mterf4Q8BVN4 346 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Slc25a21Q8BZ09 298 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Clec2hQ8C1T8 218 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Vmn1r215Q8R264 300 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Mtg1Q8R2R6 326 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Blzf1Q8R2X8 403 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 GatbQ99JT1 557 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Abcg5Q99PE8 652 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Moap1Q9ERH6 352 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 PtgesQ9JM51 153 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Mmp17Q9R0S3 578 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Dchs2A0A0A6YW72 3346 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Cdh19E9Q3A7 770 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 NgpO08692 167 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 P03987 398 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Zfp26P10076 861 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 H2-D1P14427 368 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Rps6ka3P18654 740 aaKnown RBP19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Alox12eP55249 662 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Dcaf7P61963 342 aaKnown RBP19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 AcadsQ07417 412 aaKnown RBP19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 GatcQ8CBY0 155 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Adipor1Q91VH1 375 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Scpep1Q920A5 452 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Eif2b1Q99LC8 305 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 OgfrQ99PG2 633 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Abcb9Q9JJ59 762 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 ClnkQ9QZE2 435 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Uts2Q9QZQ3 123 aa19.54■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Ighv16-1A0A0A6YW39 117 aa19.53■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Gm11634A0A1B0GSX1 172 aa19.53■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Chrna10B2RX82 447 aa19.53■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Wdr25E9Q349 535 aa19.53■□□□□ 0.72
Ccdc88a-202ENSMUST00000109477 Hsd17b10O08756 261 aaKnown RBP19.53■□□□□ 0.72
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms