RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Apcdd1Q3U128 514 aa17.07■□□□□ 0.32
Trim47-202ENSMUST00000106441 Dtx4Q6PDK8 616 aa17.07■□□□□ 0.32
Trim47-202ENSMUST00000106441 Ssuh2Q8C3L1 340 aa17.07■□□□□ 0.32
Trim47-202ENSMUST00000106441 Rdh1Q8CGV4 317 aa17.07■□□□□ 0.32
Trim47-202ENSMUST00000106441 Dync2li1Q8K0T2 351 aa17.07■□□□□ 0.32
Trim47-202ENSMUST00000106441 Cadm4Q8R464 388 aa17.07■□□□□ 0.32
Trim47-202ENSMUST00000106441 Slc22a6Q8VC69 545 aa17.07■□□□□ 0.32
Trim47-202ENSMUST00000106441 Cacng6Q8VHW3 260 aa17.07■□□□□ 0.32
Trim47-202ENSMUST00000106441 Ripply3Q924S9 152 aa17.07■□□□□ 0.32
Trim47-202ENSMUST00000106441 Cyp2u1Q9CX98 530 aa17.07■□□□□ 0.32
Trim47-202ENSMUST00000106441 Fam69aQ9D6I7 428 aa17.07■□□□□ 0.32
Trim47-202ENSMUST00000106441 Pkmyt1Q9ESG9 490 aa17.07■□□□□ 0.32
Trim47-202ENSMUST00000106441 FastkQ9JIX9 511 aa17.07■□□□□ 0.32
Trim47-202ENSMUST00000106441 Trbc2A0A075B5J4 173 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Trbc1A0A0A6YWV4 173 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Btbd16E9Q173 522 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Gm17728E9Q5K2 132 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Olfr209L7N1X3 305 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Cyp4a10O88833 509 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Gsx2P31316 305 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Cuzd1P70412 606 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Fut10Q5F2L2 481 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Nup62Q63850 526 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Rcbtb1Q6NXM2 531 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Ube2j2Q6P073 259 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Olfr684Q7TRN8 312 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Megf11Q80T91 1091 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Micu2Q8CD10 432 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Aoc1Q8JZQ5 751 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 SrrdQ8K2M3 249 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Irf2bp1Q8R3Y8 584 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Vmn1r51Q8VIC6 319 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 BlvraQ9CY64 295 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 3110001I22RikQ9CZ70 312 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Gsg1lD3Z7H4 322 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Prl7a1O54830 266 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Mab21l1O70299 359 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 CaskO70589 926 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Cfl1P18760 166 aaKnown RBP17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Acp2P24638 423 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Ccr3P51678 359 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 KapP61110 121 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Tbx4P70325 552 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 UrodP70697 367 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Hyal4Q05A56 481 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Spag8Q3V0Q6 470 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 MeikinQ5F2C3 434 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 PmlQ60953 885 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Tmeff1Q6PFE7 372 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Ubfd1Q78JW9 368 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Arl14epQ8BIX3 276 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Tctn1Q8BZ64 593 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Slc22a22Q8R0S9 554 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Osgin1Q8VC10 478 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Olfr837Q8VFJ4 312 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Ncbp2Q9CQ49 156 aaKnown RBP17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Raet1eQ9CZQ6 251 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Pop7Q9DCH2 140 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Cldn6Q9Z262 219 aa17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 CenpfE9Q3P4 2997 aaKnown RBP17.06■□□□□ 0.32
Trim47-202ENSMUST00000106441 Actl10A2AKE7 346 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 Zfp277E9Q6D6 583 aaKnown RBP17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 Gm1110F6Y113 635 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 Gm8229K7N749 213 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 Cbfa2t3O54972 620 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 H2-T3P14432 384 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 Ucp2P70406 309 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 Fam187bQ0VAY3 358 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 CtrcQ3SYP2 268 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 Rnf44Q3UHJ8 407 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 Ptpn21Q62136 1176 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 SypQ62277 314 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 Vat1Q62465 406 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 Pcdh19Q80TF3 1145 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 Slc26a11Q80ZD3 593 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 BC024139Q8BVJ3 772 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 Fitm1Q91V79 292 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 Rassf1Q99MK9 340 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 Pbld1Q9DCG6 288 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 TrehQ9JLT2 576 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 Dnase2bQ9QY48 354 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 HraslsQ9QZU4 167 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 Cep295Q8BQ48 2412 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 Gm7145A0A087WS64 360 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 Olfr723E9PZU2 309 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 Zfp141G3UY09 685 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 S100a2J3QMC7 104 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 Olfr724K7N5X7 309 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 Cnih2O35089 160 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 Dnajb3O35723 242 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 Zw10O54692 779 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 Cav3P51637 151 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 Slc1a3P56564 543 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 Lad1P57016 528 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 Rras2P62071 204 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 EvlP70429 414 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 Tamm41Q3TUH1 337 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 Nlrc3Q5DU56 1064 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 Gpr39Q5U431 456 aa17.05■□□□□ 0.32
Trim47-202ENSMUST00000106441 DmknQ6P253 517 aa17.05■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms