RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Ribc2Q9D4Q1 309 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Zdhhc4Q9D6H5 343 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Cnot9Q9JKY0 299 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Prss16Q9QXE5 509 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Syt11Q9R0N3 430 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 ReckQ9Z0J1 971 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 Pde4dipQ80YT7 2224 aa8.05□□□□□ -1.12
Trim39-201ENSMUST00000042717 9630041A04RikD3Z3U4 205 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Cd63P41731 238 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 CntfP51642 198 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Adamts15P59384 950 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Six5P70178 719 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Col9a1Q05722 921 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Pde12Q3TIU4 608 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Commd6Q3V4B5 87 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Magee2Q52KG3 523 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Ppp1r14bQ62084 147 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Tusc1Q673H1 205 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Clba1Q8BHN9 321 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 ReltQ8BX43 436 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 HopxQ8R1H0 73 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 IqchQ9D2K4 1071 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Dusp13Q9QYJ7 198 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Gm11361A0A1Y7VKY1 152 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Gpr137cE9Q343 423 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Gm28048F7BCN0 99 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Olfr574F8VQ18 346 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Cldn34aG3UW52 211 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Clk4O35493 481 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 GlaP51569 419 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Cdh5P55284 784 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Rps18P62270 152 aaKnown RBP8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Txnl4aP83877 142 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Fam117bQ3U3E2 584 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Cramp1Q6PG95 1285 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Methig1Q76I26 264 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 SnupnQ80W37 358 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Efcab3Q80X60 432 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Q8BHG2 160 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 StgQ8BM15 349 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Upp2Q8CGR7 320 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Stk32cQ8QZV4 488 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Slc5a2Q923I7 670 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Vkorc1Q9CRC0 161 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Nos1apQ9D3A8 503 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Clec3aQ9EPW4 196 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Il36aQ9JLA2 160 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Exo1Q9QZ11 837 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 ClnkQ9QZE2 435 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Dennd4cA6H8H2 1906 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Zfp54E9PW05 585 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Fbxw15L7N1X6 466 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Clk3O35492 638 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Slc6a18O88576 615 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Gsta2P10648 222 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Atp1b1P14094 304 aaKnown RBP8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Cdh2P15116 906 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Myf6P15375 242 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Hoxd9P28357 339 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Btbd3P58545 530 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Rspo3Q2TJ95 277 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Tns4Q8BZ33 696 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Lin52Q8CD94 116 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 RfesdQ8K2P6 157 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Olfr769Q8K501 312 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Gstm4Q8R5I6 218 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 FggQ8VCM7 436 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Olfr97Q8VFE1 310 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Prss42Q8VIF2 335 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Mto1Q923Z3 669 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Taf11Q99JX1 211 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Q9CQM1 111 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Gtpbp8Q9CY28 285 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Q9CZV2 255 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 GrifinQ9D1U0 144 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Lgi1Q9JIA1 557 aa8.04□□□□□ -1.12
Trim39-201ENSMUST00000042717 Plxnb1Q8CJH3 2119 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 A0A1Y7VIU7 259 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Slc25a43A2A3V2 341 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 TriqkB2B9E1 86 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Otud4B2RRE7 1107 aaKnown RBP8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Mybpc1D3YU50 1127 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Fam46aD3Z5S8 447 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Olfr653E9PVA0 317 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Gm17093F6XGJ4 214 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Vmn2r99H3BK37 856 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Gm21820J3KMU2 361 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Mfsd4b4J3QNS5 503 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Bcat2O35855 393 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Klk1b11P15946 261 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Dpp4P28843 760 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Slc16a3P57787 470 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Cd59bP58019 129 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Taf1aP97357 453 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Patl1Q3TC46 770 aaKnown RBP8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Slc16a11Q5NC32 447 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Zscan26Q5RJ54 466 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Arl14epQ8BIX3 276 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Ndc1Q8VCB1 673 aaKnown RBP8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Olfr460Q8VF31 314 aa8.03□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 20.8 ms