RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 FMO6PO60774 539 aa11.21□□□□□ -0.61
LINC00339-213ENST00000642137 GLSO94925 669 aaPredicted RBP11.21□□□□□ -0.61
LINC00339-213ENST00000642137 RASAL1O95294 804 aa11.21□□□□□ -0.61
LINC00339-213ENST00000642137 SEMG1P04279 462 aa11.21□□□□□ -0.61
LINC00339-213ENST00000642137 GPIP06744 558 aa11.21□□□□□ -0.61
LINC00339-213ENST00000642137 LINGO3P0C6S8 592 aa11.21□□□□□ -0.61
LINC00339-213ENST00000642137 GKN3PP0CG01 181 aa11.21□□□□□ -0.61
LINC00339-213ENST00000642137 PGCP20142 388 aa11.21□□□□□ -0.61
LINC00339-213ENST00000642137 ZNF136P52737 540 aa11.21□□□□□ -0.61
LINC00339-213ENST00000642137 DSCR4P56555 118 aaPredicted RBP11.21□□□□□ -0.61
LINC00339-213ENST00000642137 RGS8P57771 180 aaPredicted RBP11.21□□□□□ -0.61
LINC00339-213ENST00000642137 CHRNB3Q05901 458 aa11.21□□□□□ -0.61
LINC00339-213ENST00000642137 INAQ16352 499 aa11.21□□□□□ -0.61
LINC00339-213ENST00000642137 NDUFAF6Q330K2 333 aa11.21□□□□□ -0.61
LINC00339-213ENST00000642137 FAM98BQ52LJ0 330 aaKnown RBP11.21□□□□□ -0.61
LINC00339-213ENST00000642137 SLC6A19Q695T7 634 aa11.21□□□□□ -0.61
LINC00339-213ENST00000642137 ENPP6Q6UWR7 440 aa11.21□□□□□ -0.61
LINC00339-213ENST00000642137 CARM1Q86X55 608 aa11.21□□□□□ -0.61
LINC00339-213ENST00000642137 OR4K17Q8NGC6 315 aa11.21□□□□□ -0.61
LINC00339-213ENST00000642137 OR6T1Q8NGN1 323 aa11.21□□□□□ -0.61
LINC00339-213ENST00000642137 GEMIN6Q8WXD5 167 aaKnown RBP11.21□□□□□ -0.61
LINC00339-213ENST00000642137 PNPLA2Q96AD5 504 aa11.21□□□□□ -0.61
LINC00339-213ENST00000642137 DUS3LQ96G46 650 aaKnown RBP11.21□□□□□ -0.61
LINC00339-213ENST00000642137 SH3YL1Q96HL8 342 aaPredicted RBP11.21□□□□□ -0.61
LINC00339-213ENST00000642137 C7orf34Q96L11 122 aa11.21□□□□□ -0.61
LINC00339-213ENST00000642137 WFDC6Q9BQY6 131 aa11.21□□□□□ -0.61
LINC00339-213ENST00000642137 MFRPQ9BY79 579 aa11.21□□□□□ -0.61
LINC00339-213ENST00000642137 TTTY12Q9BZ98 90 aa11.21□□□□□ -0.61
LINC00339-213ENST00000642137 AMBRA1Q9C0C7 1298 aa11.21□□□□□ -0.61
LINC00339-213ENST00000642137 QPCTLQ9NXS2 382 aa11.21□□□□□ -0.61
LINC00339-213ENST00000642137 ANAPC2Q9UJX6 822 aa11.21□□□□□ -0.61
LINC00339-213ENST00000642137 ANKRD11Q6UB99 2663 aaPredicted RBP11.21□□□□□ -0.62
LINC00339-213ENST00000642137 CHD8Q9HCK8 2581 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 A0A087WZY1 265 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 DHRS12A0PJE2 317 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 LRRC3CA6NJW4 275 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 C17orf51A8MQB3 221 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 B4DXG7 233 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 AP3D1O14617 1153 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 FRS3O43559 492 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 TPST2O60704 377 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 ADAM11O75078 769 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 IFNW1P05000 195 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 UQCRBP14927 111 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 SRD5A2P31213 254 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 OR1E2P47887 323 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 DLX5P56178 289 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 COPZ1P61923 177 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 PLGLB1Q02325 96 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 CCNIQ14094 377 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 GANABQ14697 944 aaKnown RBP11.2□□□□□ -0.62
LINC00339-213ENST00000642137 KPNB1Q14974 876 aaKnown RBP11.2□□□□□ -0.62
LINC00339-213ENST00000642137 GLYR1Q49A26 553 aaPredicted RBP11.2□□□□□ -0.62
LINC00339-213ENST00000642137 PIWIL3Q7Z3Z3 882 aaKnown RBP11.2□□□□□ -0.62
LINC00339-213ENST00000642137 RANBP3LQ86VV4 465 aaPredicted RBP11.2□□□□□ -0.62
LINC00339-213ENST00000642137 SLC22A16Q86VW1 577 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 LACC1Q8IV20 430 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 ADGRG5Q8IZF4 528 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 TMCO5AQ8N6Q1 288 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 FAM86B1Q8N7N1 296 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 LSMEM1Q8N8F7 131 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 TEX19Q8NA77 164 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 PAPD5Q8NDF8 572 aaKnown RBP11.2□□□□□ -0.62
LINC00339-213ENST00000642137 OR4D11Q8NGI4 311 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 VANGL1Q8TAA9 524 aaPredicted RBP11.2□□□□□ -0.62
LINC00339-213ENST00000642137 CANT1Q8WVQ1 401 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 TMEM234Q8WY98 164 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 C1GALT1C1Q96EU7 318 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 SLC47A1Q96FL8 570 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 SEPHS2Q99611 448 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 MCHR1Q99705 422 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 ZNF559Q9BR84 538 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 TRIM2Q9C040 744 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 POLR2J2Q9GZM3 115 aaKnown RBP11.2□□□□□ -0.62
LINC00339-213ENST00000642137 POLR2J3Q9H1A7 115 aaKnown RBP11.2□□□□□ -0.62
LINC00339-213ENST00000642137 UBQLN3Q9H347 655 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 DENND2DQ9H6A0 471 aaPredicted RBP11.2□□□□□ -0.62
LINC00339-213ENST00000642137 TMEM27Q9HBJ8 222 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 IL1RAPQ9NPH3 570 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 CCM2LQ9NUG4 571 aaPredicted RBP11.2□□□□□ -0.62
LINC00339-213ENST00000642137 B4GALT7Q9UBV7 327 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 TESQ9UGI8 421 aaKnown RBP11.2□□□□□ -0.62
LINC00339-213ENST00000642137 FBXL2Q9UKC9 423 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 LHX6Q9UPM6 363 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 C15orf41Q9Y2V0 281 aa11.2□□□□□ -0.62
LINC00339-213ENST00000642137 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.19□□□□□ -0.62
LINC00339-213ENST00000642137 FAM47E-STBD1D6RA91 191 aa11.19□□□□□ -0.62
LINC00339-213ENST00000642137 M0R3H8 397 aa11.19□□□□□ -0.62
LINC00339-213ENST00000642137 ACOT7O00154 380 aa11.19□□□□□ -0.62
LINC00339-213ENST00000642137 ETV2O00321 342 aaPredicted RBP11.19□□□□□ -0.62
LINC00339-213ENST00000642137 ZIC3O60481 467 aa11.19□□□□□ -0.62
LINC00339-213ENST00000642137 NUDT14O95848 222 aa11.19□□□□□ -0.62
LINC00339-213ENST00000642137 RFPL3SP0C7P2 107 aa11.19□□□□□ -0.62
LINC00339-213ENST00000642137 RAP2AP10114 183 aa11.19□□□□□ -0.62
LINC00339-213ENST00000642137 PRG2P13727 222 aa11.19□□□□□ -0.62
LINC00339-213ENST00000642137 ITGA2P17301 1181 aa11.19□□□□□ -0.62
LINC00339-213ENST00000642137 TNFRSF1BP20333 461 aa11.19□□□□□ -0.62
LINC00339-213ENST00000642137 PSMA4P25789 261 aaKnown RBP11.19□□□□□ -0.62
LINC00339-213ENST00000642137 DPP4P27487 766 aa11.19□□□□□ -0.62
LINC00339-213ENST00000642137 SLC7A1P30825 629 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms