RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 COL4A5P29400 1685 aa13.48□□□□□ -0.25
SCARB2-216ENST00000639300 TEX13DA0A0J9YY54 714 aaPredicted RBP13.48□□□□□ -0.25
SCARB2-216ENST00000639300 MEIOCA2RUB1 952 aa13.48□□□□□ -0.25
SCARB2-216ENST00000639300 OPN1LWP04000 364 aa13.48□□□□□ -0.25
SCARB2-216ENST00000639300 ELOAQ14241 798 aaKnown RBP13.48□□□□□ -0.25
SCARB2-216ENST00000639300 GBX1Q14549 363 aa13.48□□□□□ -0.25
SCARB2-216ENST00000639300 TMEM184AQ6ZMB5 413 aa13.48□□□□□ -0.25
SCARB2-216ENST00000639300 SFXN5Q8TD22 340 aa13.48□□□□□ -0.25
SCARB2-216ENST00000639300 DUS3LQ96G46 650 aaKnown RBP13.48□□□□□ -0.25
SCARB2-216ENST00000639300 MBOAT4Q96T53 435 aa13.48□□□□□ -0.25
SCARB2-216ENST00000639300 RHNO1Q9BSD3 238 aa13.48□□□□□ -0.25
SCARB2-216ENST00000639300 DPCDQ9BVM2 203 aaPredicted RBP13.48□□□□□ -0.25
SCARB2-216ENST00000639300 FOLH1BQ9HBA9 442 aa13.48□□□□□ -0.25
SCARB2-216ENST00000639300 ABI3Q9P2A4 366 aa13.48□□□□□ -0.25
SCARB2-216ENST00000639300 H0Y8X5 98 aa13.48□□□□□ -0.25
SCARB2-216ENST00000639300 TMX2-CTNND1H3BSU7 103 aa13.48□□□□□ -0.25
SCARB2-216ENST00000639300 UGT2B7P16662 529 aa13.48□□□□□ -0.25
SCARB2-216ENST00000639300 PITPNBP48739 271 aa13.48□□□□□ -0.25
SCARB2-216ENST00000639300 STEAP3Q658P3 488 aa13.48□□□□□ -0.25
SCARB2-216ENST00000639300 Q6ZNB5 142 aa13.48□□□□□ -0.25
SCARB2-216ENST00000639300 SLC35F2Q8IXU6 374 aa13.48□□□□□ -0.25
SCARB2-216ENST00000639300 SLC7A5P1Q8MH63 180 aa13.48□□□□□ -0.25
SCARB2-216ENST00000639300 OR2T35Q8NGX2 323 aa13.48□□□□□ -0.25
SCARB2-216ENST00000639300 OR5AK2Q8NH90 309 aa13.48□□□□□ -0.25
SCARB2-216ENST00000639300 THRSPQ92748 146 aa13.48□□□□□ -0.25
SCARB2-216ENST00000639300 EID2BQ96D98 161 aa13.48□□□□□ -0.25
SCARB2-216ENST00000639300 ASB16Q96NS5 453 aa13.48□□□□□ -0.25
SCARB2-216ENST00000639300 TRIP12Q14669 1992 aaPredicted RBP13.48□□□□□ -0.25
SCARB2-216ENST00000639300 DOCK5Q9H7D0 1870 aa13.48□□□□□ -0.25
SCARB2-216ENST00000639300 CACNA1IQ9P0X4 2223 aa13.48□□□□□ -0.25
SCARB2-216ENST00000639300 POM121BA6NF01 834 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 ZNF208O43345 1280 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 MMP11P24347 488 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 NKG7Q16617 165 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 TMEM164Q5U3C3 297 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 ULK3Q6PHR2 472 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 ZNF683Q8IZ20 524 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 FAM83FQ8NEG4 500 aaPredicted RBP13.47□□□□□ -0.25
SCARB2-216ENST00000639300 ITFG2Q969R8 447 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 ELP4Q96EB1 424 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 PDXPQ96GD0 296 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 CDCA3Q99618 268 aaPredicted RBP13.47□□□□□ -0.25
SCARB2-216ENST00000639300 ACER3Q9NUN7 267 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 PCP4L1A6NKN8 68 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 VSTM2BA6NLU5 285 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 F13BP05160 661 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 BMP1P13497 986 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 ERP29P30040 261 aaKnown RBP13.47□□□□□ -0.25
SCARB2-216ENST00000639300 METAP1P53582 386 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 GPR18Q14330 331 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 MFSD9Q8NBP5 474 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 CHPT1Q8WUD6 406 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 TNFRSF13CQ96RJ3 184 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 SLC6A7Q99884 636 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 PPIL3Q9H2H8 161 aaKnown RBP13.47□□□□□ -0.25
SCARB2-216ENST00000639300 ABCA3Q99758 1704 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 NARSO43776 548 aaKnown RBP13.47□□□□□ -0.25
SCARB2-216ENST00000639300 CLEC2LP0C7M8 214 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 JUNBP17275 347 aaPredicted RBP13.47□□□□□ -0.25
SCARB2-216ENST00000639300 PTH2RP49190 550 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 RPS25P62851 125 aaKnown RBP13.47□□□□□ -0.25
SCARB2-216ENST00000639300 FGFBP1Q14512 234 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 PYHIN1Q6K0P9 492 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 ANKRD54Q6NXT1 300 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 MEPCEQ7L2J0 689 aaKnown RBP13.47□□□□□ -0.25
SCARB2-216ENST00000639300 ZNF584Q8IVC4 421 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 TRIM43Q96BQ3 446 aaPredicted RBP13.47□□□□□ -0.25
SCARB2-216ENST00000639300 PITX2Q99697 317 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 SIDT1Q9NXL6 827 aaKnown RBP13.47□□□□□ -0.25
SCARB2-216ENST00000639300 SPHK1Q9NYA1 384 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 B3GNT3Q9Y2A9 372 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 KLK4Q9Y5K2 254 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 LRIT2A6NDA9 550 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 SLC1A3P43003 542 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 S100A10P60903 97 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 TMEM64Q6YI46 380 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 ALDH16A1Q8IZ83 802 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 SAGE1Q9NXZ1 904 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 SLC35A3Q9Y2D2 325 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 DOCK3Q8IZD9 2030 aa13.47□□□□□ -0.25
SCARB2-216ENST00000639300 DLEC1Q9Y238 1755 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 ASPDHA6ND91 283 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 TP53I11O14683 189 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 PPM1DO15297 605 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 NR2C1P13056 603 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 APEX1P27695 318 aaKnown RBP13.46□□□□□ -0.25
SCARB2-216ENST00000639300 TGFBR1P36897 503 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 PDX1P52945 283 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 GP2P55259 537 aaKnown RBP13.46□□□□□ -0.25
SCARB2-216ENST00000639300 RIMKLAQ8IXN7 391 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 BEST4Q8NFU0 473 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 HMGCLL1Q8TB92 370 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 THAP7Q9BT49 309 aaPredicted RBP13.46□□□□□ -0.25
SCARB2-216ENST00000639300 BTBD2Q9BX70 525 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 ZNF471Q9BX82 626 aaPredicted RBP13.46□□□□□ -0.25
SCARB2-216ENST00000639300 POTEKPQ9BYX7 375 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 ARL6Q9H0F7 186 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 C12orf4Q9NQ89 552 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 ASB6Q9NWX5 421 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 CD207Q9UJ71 328 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms