RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 ZNF285Q96NJ3 590 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 OR2A5Q96R48 311 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 PKP4Q99569 1192 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 LIN28AQ9H9Z2 209 aaKnown RBP4.45□□□□□ -1.7
LINC00550-201ENST00000629293 ANKHQ9HCJ1 492 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 RASSF1Q9NS23 344 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 DCAF13Q9NV06 445 aaKnown RBP4.45□□□□□ -1.7
LINC00550-201ENST00000629293 DDX18Q9NVP1 670 aaKnown RBP4.45□□□□□ -1.7
LINC00550-201ENST00000629293 ETAA1Q9NY74 926 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 DNAJB9Q9UBS3 223 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 FBXW2Q9UKT8 454 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 MEMO1Q9Y316 297 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 ANGPTL3Q9Y5C1 460 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 V9GYQ6 96 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 ELOVL7A1L3X0 281 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 NPIPA2E9PIF3 369 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 NPIPA3F8WFD2 350 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 CXCR6O00574 342 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 KRT6AP02538 564 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 KRT6BP04259 564 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 PRPS2P11908 318 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 HOXB6P17509 224 aaKnown RBP4.45□□□□□ -1.7
LINC00550-201ENST00000629293 SDC1P18827 310 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 TTKP33981 857 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 PTGS2P35354 604 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 MAGEA2P43356 314 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 KRT6CP48668 564 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 C21orf58P58505 322 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 CHRNB3Q05901 458 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 PRDX1Q06830 199 aaKnown RBP4.45□□□□□ -1.7
LINC00550-201ENST00000629293 PMS2P3Q13401 168 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 RAB39AQ14964 217 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 CEBPEQ15744 281 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 INAQ16352 499 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 CPSF6Q16630 551 aaKnown RBP eCLIP4.45□□□□□ -1.7
LINC00550-201ENST00000629293 CFAP161Q6P656 301 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 ZNF773Q6PK81 442 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 ZNF551Q7Z340 670 aaPredicted RBP4.45□□□□□ -1.7
LINC00550-201ENST00000629293 RPS19BP1Q86WX3 136 aaKnown RBP4.45□□□□□ -1.7
LINC00550-201ENST00000629293 GHDCQ8N2G8 530 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 SVOPLQ8N434 492 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 RPRMLQ8N4K4 120 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 TMEM156Q8N614 296 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 OR5M3Q8NGP4 307 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 OR10A6Q8NH74 314 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 POP5Q969H6 163 aaKnown RBP4.45□□□□□ -1.7
LINC00550-201ENST00000629293 PYCR2Q96C36 320 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 C12orf43Q96C57 262 aaKnown RBP4.45□□□□□ -1.7
LINC00550-201ENST00000629293 AURKBQ96GD4 344 aaPredicted RBP4.45□□□□□ -1.7
LINC00550-201ENST00000629293 IMMP1LQ96LU5 166 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 GPR137Q96N19 417 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 SH3GL1Q99961 368 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 TUBA1CQ9BQE3 449 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 OSBPL10Q9BXB5 764 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 UGT2B28Q9BY64 529 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 DEFB127Q9H1M4 99 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 PARVBQ9HBI1 364 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 TMED5Q9Y3A6 229 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 NAALAD2Q9Y3Q0 740 aa4.45□□□□□ -1.7
LINC00550-201ENST00000629293 IGLV3-12A0A075B6K2 115 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 A0A0G2JN53 185 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 PABPN1LA6NDY0 278 aaKnown RBP4.44□□□□□ -1.7
LINC00550-201ENST00000629293 FAM166BA8MTA8 275 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 NDUFS4O43181 175 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 PSPNO60542 156 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 SEC22BO75396 215 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 SEMG1P04279 462 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 POLR2IP36954 125 aaKnown RBP4.44□□□□□ -1.7
LINC00550-201ENST00000629293 HNMTP50135 292 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 NR0B1P51843 470 aaKnown RBP4.44□□□□□ -1.7
LINC00550-201ENST00000629293 RAB8AP61006 207 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 ESRRGP62508 458 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 ROM1Q03395 351 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 TAP2Q03519 686 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 NAE1Q13564 534 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 IMPG1Q17R60 797 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 MSMPQ1L6U9 139 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 SLC25A25Q6KCM7 469 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 ANKRD37Q7Z713 158 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 PAQR7Q86WK9 346 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 CLVS1Q8IUQ0 354 aaPredicted RBP4.44□□□□□ -1.7
LINC00550-201ENST00000629293 FAM9CQ8IZT9 166 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 HORMAD2Q8N7B1 307 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 OR13F1Q8NGS4 319 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 FIG4Q92562 907 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 SLC47A1Q96FL8 570 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 CMTM7Q96FZ5 175 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 MUS81Q96NY9 551 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 OR52E6Q96RD3 313 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 VRK1Q99986 396 aaPredicted RBP4.44□□□□□ -1.7
LINC00550-201ENST00000629293 ZNF559Q9BR84 538 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 GABARAPL1Q9H0R8 117 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 ACTR8Q9H981 624 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 MCCC2Q9HCC0 563 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 UTS2RQ9UKP6 389 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 ERVK-11Q9UQG0 969 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 MAGED1Q9Y5V3 778 aaPredicted RBP4.44□□□□□ -1.7
LINC00550-201ENST00000629293 NINQ8N4C6 2090 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 ZNF469Q96JG9 3925 aaPredicted RBP4.44□□□□□ -1.7
LINC00550-201ENST00000629293 H3BMQ9 156 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms