RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 ACSM3Q53FZ2 586 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 AGBL4Q5VU57 503 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 XKRXQ6PP77 449 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 NANOGP1Q8N7R0 232 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 OR7G2Q8NG99 324 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 SFXN5Q8TD22 340 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 CREB3L4Q8TEY5 395 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 SLC7A6Q92536 515 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 FGF14Q92915 247 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 RIT1Q92963 219 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 DGAT2Q96PD7 388 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 NEDD4LQ96PU5 975 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 TNFRSF13CQ96RJ3 184 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 PLA2G12AQ9BZM1 189 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 C14orf105Q9NVL8 296 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 KCMF1Q9P0J7 381 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 KCNE3Q9Y6H6 103 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 ATAD5Q96QE3 1844 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 ZNF879B4DU55 563 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 SOCS6O14544 535 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 TNFRSF10CO14798 259 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 PROS1P07225 676 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 CD3GP09693 182 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 TACSTD2P09758 323 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 CXCR1P25024 350 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 HNRNPFP52597 415 aaKnown RBP5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 PPP2CBP62714 309 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 PPP2CAP67775 309 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 GRM7Q14831 915 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 C9orf50Q5SZB4 431 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 TSEN54Q7Z6J9 526 aaKnown RBP5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 OR10H5Q8NGA6 315 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 OR13C2Q8NGS9 318 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 RPLP0P6Q8NHW5 317 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 ACOT12Q8WYK0 555 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 RSC1A1Q92681 617 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 RFT1Q96AA3 541 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 EFHD2Q96C19 240 aaPredicted RBP5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 SERINC2Q96SA4 455 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 ADOQ96SZ5 270 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 ANKRD19PQ9H560 264 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 CENPMQ9NSP4 180 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 MED17Q9NVC6 651 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 UCKL1Q9NWZ5 548 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 IL20Q9NYY1 176 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 KCND3Q9UK17 655 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 TRAV6A0A075B6T7 132 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 SLC9B1P1A6NJY1 282 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 TOXO94900 526 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 ADPRHP54922 357 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 RPS25P62851 125 aaKnown RBP5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 SELENBP1Q13228 472 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 RAB30Q15771 203 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 ODF4Q2M2E3 257 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 HSD17B12Q53GQ0 312 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 PRAMEF8Q5VWM4 474 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 PRAMEF7Q5VXH5 474 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 SLC35A4Q96G79 324 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 SENP5Q96HI0 755 aaPredicted RBP5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 BTBD2Q9BX70 525 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 TEX101Q9BY14 249 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 ERVK-19Q9WJR5 959 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 POLHQ9Y253 713 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 WNK3Q9BYP7 1800 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 A0A1B0GVT2 93 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 DSCR3O14972 297 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 GMFGO60234 142 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 ITGA10O75578 1167 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 APBB3O95704 486 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 FCER2P06734 321 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 SBK2P0C263 348 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 RAB3BP20337 219 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 MAOBP27338 520 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 HTR3AP46098 478 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 PDX1P52945 283 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 TP53I3Q53FA7 332 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 NXNL2Q5VZ03 156 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 FAAH2Q6GMR7 532 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 LIN54Q6MZP7 749 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 HDDC2Q7Z4H3 204 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 GDF7Q7Z4P5 450 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 UBE2Q1Q7Z7E8 422 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 MCATQ8IVS2 390 aaKnown RBP5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 SFTPA1Q8IWL2 248 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 IL17RCQ8NAC3 791 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 MFSD9Q8NBP5 474 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 OR6N2Q8NGY6 317 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 SPRYD4Q8WW59 207 aaPredicted RBP5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 DIO2Q92813 273 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 GHSRQ92847 366 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 DNAJA3Q96EY1 480 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 TXNDC15Q96J42 360 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 NECTIN4Q96NY8 510 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 TMA7Q9Y2S6 64 aaKnown RBP5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 ASB4Q9Y574 426 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 PCDHGA3Q9Y5H0 932 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 TMEM14AQ9Y6G1 99 aa5.25□□□□□ -1.57
SYNCRIP-204ENST00000616122 TRAV27A0A087WT01 109 aa5.24□□□□□ -1.57
SYNCRIP-204ENST00000616122 TRDV1A0A1B0GX56 115 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms