RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 UQCC2Q9BRT2 126 aa20.42■□□□□ 0.86
POLR2J3-220ENST00000613744 OR51B5Q9H339 312 aa20.42■□□□□ 0.86
POLR2J3-220ENST00000613744 SERHL2Q9H4I8 314 aa20.42■□□□□ 0.86
POLR2J3-220ENST00000613744 OR1A2Q9Y585 309 aa20.42■□□□□ 0.86
POLR2J3-220ENST00000613744 SLC22A23A1A5C7 686 aa20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 LATO43561 262 aa20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 SSNA1O43805 119 aa20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 SEMA7AO75326 666 aa20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 B3GALNT1O75752 331 aa20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 EIF4EP06730 217 aaKnown RBP20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 RNF144AP50876 292 aaPredicted RBP20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 PITPNAQ00169 270 aa20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 B4GALNT1Q00973 533 aa20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 LYPD4Q6UWN0 246 aa20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 KRT74Q7RTS7 529 aa20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 SLITRK4Q8IW52 837 aa20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 NFKBIL1Q9UBC1 381 aaPredicted RBP20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 ICKQ9UPZ9 632 aa20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 EXOGQ9Y2C4 368 aaKnown RBP20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 CUL9Q8IWT3 2517 aa20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 PLXNA2O75051 1894 aa20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 A0A1W2PRB8 838 aa20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 POM121BA6NF01 834 aa20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 METTL12A8MUP2 240 aa20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 ABCD4O14678 606 aa20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 CELP19835 753 aa20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 DYRK1AQ13627 763 aa20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 FAM71E1Q6IPT2 247 aa20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 BAIAP2L2Q6UXY1 529 aa20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 NLRC3Q7RTR2 1065 aa20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 TPRA1Q86W33 373 aa20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 ZFP41Q8N8Y5 198 aa20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 FBXO15Q8NCQ5 510 aaPredicted RBP20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 GLYATL1Q969I3 302 aa20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 DACT3Q96B18 629 aaPredicted RBP20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 TMPRSS13Q9BYE2 586 aa20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 WASH6PQ9NQA3 447 aa20.41■□□□□ 0.86
POLR2J3-220ENST00000613744 CEP192Q8TEP8 1941 aa20.4■□□□□ 0.86
POLR2J3-220ENST00000613744 THADAQ6YHU6 1953 aa20.4■□□□□ 0.86
POLR2J3-220ENST00000613744 IGHA1P01876 353 aa20.4■□□□□ 0.86
POLR2J3-220ENST00000613744 PROS1P07225 676 aa20.4■□□□□ 0.86
POLR2J3-220ENST00000613744 FGF2P09038 288 aa20.4■□□□□ 0.86
POLR2J3-220ENST00000613744 OR12D1P0DN82 309 aa20.4■□□□□ 0.86
POLR2J3-220ENST00000613744 CD53P19397 219 aa20.4■□□□□ 0.86
POLR2J3-220ENST00000613744 MMP11P24347 488 aa20.4■□□□□ 0.86
POLR2J3-220ENST00000613744 SOAT1P35610 550 aa20.4■□□□□ 0.86
POLR2J3-220ENST00000613744 SOX18P35713 384 aa20.4■□□□□ 0.86
POLR2J3-220ENST00000613744 IGFALSP35858 605 aa20.4■□□□□ 0.86
POLR2J3-220ENST00000613744 MMP15P51511 669 aa20.4■□□□□ 0.86
POLR2J3-220ENST00000613744 VSX2P58304 361 aaPredicted RBP20.4■□□□□ 0.86
POLR2J3-220ENST00000613744 MPEG1Q2M385 716 aa20.4■□□□□ 0.86
POLR2J3-220ENST00000613744 B3GNTL1Q67FW5 361 aaPredicted RBP20.4■□□□□ 0.86
POLR2J3-220ENST00000613744 PODNL1Q6PEZ8 512 aa20.4■□□□□ 0.86
POLR2J3-220ENST00000613744 DEF8Q6ZN54 512 aa20.4■□□□□ 0.86
POLR2J3-220ENST00000613744 SECISBP2Q96T21 854 aaKnown RBP20.4■□□□□ 0.86
POLR2J3-220ENST00000613744 LRFN3Q9BTN0 628 aa20.4■□□□□ 0.86
POLR2J3-220ENST00000613744 ING1Q9UK53 422 aaPredicted RBP20.4■□□□□ 0.86
POLR2J3-220ENST00000613744 LAMA1P25391 3075 aa20.39■□□□□ 0.86
POLR2J3-220ENST00000613744 SGTAO43765 313 aa20.39■□□□□ 0.86
POLR2J3-220ENST00000613744 HNRNPA2B1P22626 353 aaKnown RBP20.39■□□□□ 0.86
POLR2J3-220ENST00000613744 GIFP27352 417 aa20.39■□□□□ 0.86
POLR2J3-220ENST00000613744 THBS2P35442 1172 aa20.39■□□□□ 0.86
POLR2J3-220ENST00000613744 CCR5P51681 352 aa20.39■□□□□ 0.86
POLR2J3-220ENST00000613744 RPS7P62081 194 aaKnown RBP20.39■□□□□ 0.86
POLR2J3-220ENST00000613744 FOXD4Q12950 439 aaPredicted RBP20.39■□□□□ 0.86
POLR2J3-220ENST00000613744 ZNF169Q14929 603 aaPredicted RBP20.39■□□□□ 0.86
POLR2J3-220ENST00000613744 SLC27A4Q6P1M0 643 aa20.39■□□□□ 0.86
POLR2J3-220ENST00000613744 ZNF765Q7L2R6 523 aa20.39■□□□□ 0.86
POLR2J3-220ENST00000613744 ZER1Q7Z7L7 766 aa20.39■□□□□ 0.86
POLR2J3-220ENST00000613744 GPR156Q8NFN8 814 aa20.39■□□□□ 0.86
POLR2J3-220ENST00000613744 OR5AK3PQ8NH89 298 aa20.39■□□□□ 0.86
POLR2J3-220ENST00000613744 TEX47Q8TBZ9 253 aa20.39■□□□□ 0.86
POLR2J3-220ENST00000613744 SFXN2Q96NB2 322 aa20.39■□□□□ 0.86
POLR2J3-220ENST00000613744 ZNF607Q96SK3 696 aa20.39■□□□□ 0.86
POLR2J3-220ENST00000613744 SPATA5L1Q9BVQ7 753 aa20.39■□□□□ 0.86
POLR2J3-220ENST00000613744 LGR4Q9BXB1 951 aa20.39■□□□□ 0.86
POLR2J3-220ENST00000613744 SCPEP1Q9HB40 452 aa20.39■□□□□ 0.86
POLR2J3-220ENST00000613744 KLF15Q9UIH9 416 aa20.39■□□□□ 0.86
POLR2J3-220ENST00000613744 A4GNTQ9UNA3 340 aa20.39■□□□□ 0.86
POLR2J3-220ENST00000613744 PLXNB3Q9ULL4 1909 aa20.39■□□□□ 0.86
POLR2J3-220ENST00000613744 CD8B2A6NJW9 211 aa20.39■□□□□ 0.85
POLR2J3-220ENST00000613744 C10orf142B7Z368 130 aa20.39■□□□□ 0.85
POLR2J3-220ENST00000613744 FOXE1O00358 373 aaPredicted RBP20.39■□□□□ 0.85
POLR2J3-220ENST00000613744 GALR2O43603 387 aaPredicted RBP20.39■□□□□ 0.85
POLR2J3-220ENST00000613744 CD8BP10966 210 aa20.39■□□□□ 0.85
POLR2J3-220ENST00000613744 BLVRAP53004 296 aa20.39■□□□□ 0.85
POLR2J3-220ENST00000613744 ZP1P60852 638 aa20.39■□□□□ 0.85
POLR2J3-220ENST00000613744 TSPAN5P62079 268 aa20.39■□□□□ 0.85
POLR2J3-220ENST00000613744 DPTQ07507 201 aa20.39■□□□□ 0.85
POLR2J3-220ENST00000613744 LPAL2Q16609 132 aa20.39■□□□□ 0.85
POLR2J3-220ENST00000613744 FAM71CQ8NEG0 241 aa20.39■□□□□ 0.85
POLR2J3-220ENST00000613744 SLC38A5Q8WUX1 472 aa20.39■□□□□ 0.85
POLR2J3-220ENST00000613744 NEURL3Q96EH8 262 aa20.39■□□□□ 0.85
POLR2J3-220ENST00000613744 SPRTNQ9H040 489 aaPredicted RBP20.39■□□□□ 0.85
POLR2J3-220ENST00000613744 BRD7Q9NPI1 651 aa20.39■□□□□ 0.85
POLR2J3-220ENST00000613744 GMEB2Q9UKD1 530 aa20.39■□□□□ 0.85
POLR2J3-220ENST00000613744 PPIEQ9UNP9 301 aaKnown RBP20.39■□□□□ 0.85
POLR2J3-220ENST00000613744 PLXND1Q9Y4D7 1925 aa20.39■□□□□ 0.85
POLR2J3-220ENST00000613744 A0A1W2PPC4 97 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 OR2AG2A6NM03 316 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms