RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 ABRACLQ9P1F3 81 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 STOX2Q9P2F5 926 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 RPS6KB2Q9UBS0 482 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 CLEC2DQ9UHP7 191 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 UBQLN1Q9UMX0 589 aaKnown RBP3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 PPIEQ9UNP9 301 aaKnown RBP3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 MED16Q9Y2X0 877 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 ENPP4Q9Y6X5 453 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 UBR3Q6ZT12 1888 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 PLXNA1Q9UIW2 1896 aa3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 XIRP1Q702N8 1843 aaKnown RBP3.79□□□□□ -1.8
HMGB1P50-201ENST00000605814 EVPLQ92817 2033 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 MCM3APO60318 1980 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 TRPM7Q96QT4 1865 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 LOC105369274A0A096LPK9 316 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 TCRBV16S1A1N1A0A5B0 115 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 GSAPA4D1B5 854 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 PSMD9O00233 223 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 WWP2O00308 870 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 MANBAO00462 879 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 ZNF593O00488 134 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 SLC31A2O15432 143 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 FGF16O43320 207 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 CHST10O43529 356 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 SSNA1O43805 119 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 LANCL1O43813 399 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 PRAMEF2O60811 474 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 EFCAB14O75071 495 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 NIPSNAP2O75323 286 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 NDUFS6O75380 124 aaKnown RBP3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 ULK1O75385 1050 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 REM1O75628 298 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 KRT33AO76009 404 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 RECQL4O94761 1208 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 DIRAS1O95057 198 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 PEX11BO96011 259 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 SERPINA3P01011 423 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 GASTP01350 101 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 VTNP04004 478 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 HRGP04196 525 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 ALDOBP05062 364 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 SRPRAP08240 638 aaKnown RBP3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 ZNF806P0C7X5 589 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 CXCL8P10145 99 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 SPP1P10451 314 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 TFPIP10646 304 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 ACP2P11117 423 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 CD79AP11912 226 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 PKMP14618 531 aaKnown RBP3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 ABOP16442 354 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 DPEP1P16444 411 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 RCC1P18754 421 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 HLA-DPA1P20036 260 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 POU3F2P20265 443 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 GIFP27352 417 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 AGTR1P30556 359 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 SDHAP31040 664 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 CCR7P32248 378 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 CHI3L1P36222 383 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 CD79BP40259 229 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 ACTR1BP42025 376 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 SLC1A3P43003 542 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 AVPR1BP47901 424 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 KCNJ3P48549 501 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 POU3F4P49335 361 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 FNTBP49356 437 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 NDUFV1P49821 464 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 HTR6P50406 440 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 CCR9P51686 369 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 CAPZA1P52907 286 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 WNT3P56703 355 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 VSX2P58304 361 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 ERVK-25P63136 954 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 MRPS10P82664 201 aaKnown RBP3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 CDK5Q00535 292 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 DEFA5Q01523 94 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 DEFA6Q01524 100 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 TNFRSF17Q02223 184 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 MXD1Q05195 221 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 ILF3Q12906 894 aaKnown RBP eCLIP3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 FOXL1Q12952 345 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 HTR4Q13639 388 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 IL10RAQ13651 578 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 KLF9Q13886 244 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 GTF2H2Q13888 395 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 HABP2Q14520 560 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 SMCO1Q147U7 214 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 TMEM132DQ14C87 1099 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 HEPACAMQ14CZ8 416 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 ABRAXAS2Q15018 415 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 SMAD1Q15797 465 aaKnown RBP3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 SGCAQ16586 387 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 EXOC3L2Q2M3D2 409 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 GGTA1PQ4G0N0 100 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 SGO1Q5FBB7 561 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 OR2B11Q5JQS5 317 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 RAB41Q5JT25 222 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 PRAMEF19Q5SWL8 479 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 SPOUT1Q5T280 376 aaKnown RBP3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 LIPKQ5VXJ0 399 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms