RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-223	ENST00000599223	PPP3CB	P16298	524 aa		13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	SFTPD	P35247	375 aa		13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	ZNF41	P51814	821 aa	Predicted RBP	13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	NR1H2	P55055	460 aa		13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	RAC1	P63000	192 aa		13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	ZNF117	Q03924	483 aa		13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	ZNF239	Q16600	458 aa	Known RBP	13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	NDUFAF6	Q330K2	333 aa		13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	VPS26B	Q4G0F5	336 aa		13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	LIPM	Q5VYY2	423 aa		13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	ATG16L1	Q676U5	607 aa		13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	CBLN3	Q6UW01	205 aa		13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	SEZ6L2	Q6UXD5	910 aa		13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	TFAP2E	Q6VUC0	442 aa		13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	COX18	Q8N8Q8	333 aa		13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	ZFP28	Q8NHY6	868 aa		13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	ACTRT2	Q8TDY3	377 aa		13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	JADE3	Q92613	823 aa		13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	CDS1	Q92903	461 aa		13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	S100PBP	Q96BU1	408 aa		13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	METTL2A	Q96IZ6	378 aa	Known RBP	13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	KLHL15	Q96M94	604 aa		13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	GATA5	Q9BWX5	397 aa	Predicted RBP	13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	FAM107B	Q9H098	131 aa		13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	COQ10B	Q9H8M1	238 aa		13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	UBQLN4	Q9NRR5	601 aa		13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	ACSS1	Q9NUB1	689 aa	Predicted RBP	13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	DNAJC15	Q9Y5T4	150 aa		13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	RTTN	Q86VV8	2226 aa		13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	SLC28A1	O00337	649 aa		13.07	□□□□□ -0.32
IRF3-223	ENST00000599223	RGS14	O43566	566 aa		13.07	□□□□□ -0.32
IRF3-223	ENST00000599223	SYNGR4	O95473	234 aa		13.07	□□□□□ -0.32
IRF3-223	ENST00000599223	FAM107A	O95990	144 aa		13.07	□□□□□ -0.32
IRF3-223	ENST00000599223	PSMB1	P20618	241 aa	Known RBP	13.07	□□□□□ -0.32
IRF3-223	ENST00000599223	SERPINB4	P48594	390 aa		13.07	□□□□□ -0.32
IRF3-223	ENST00000599223	MANF	P55145	182 aa	Known RBP	13.07	□□□□□ -0.32
IRF3-223	ENST00000599223	WDR4	P57081	412 aa	Known RBP	13.07	□□□□□ -0.32
IRF3-223	ENST00000599223	NAA20	P61599	178 aa		13.07	□□□□□ -0.32
IRF3-223	ENST00000599223	LASP1	Q14847	261 aa	Known RBP	13.07	□□□□□ -0.32
IRF3-223	ENST00000599223	GALNTL6	Q49A17	601 aa		13.07	□□□□□ -0.32
IRF3-223	ENST00000599223	CPTP	Q5TA50	214 aa		13.07	□□□□□ -0.32
IRF3-223	ENST00000599223	ALKBH2	Q6NS38	261 aa		13.07	□□□□□ -0.32
IRF3-223	ENST00000599223	RNF165	Q6ZSG1	346 aa		13.07	□□□□□ -0.32
IRF3-223	ENST00000599223	ZNF771	Q7L3S4	317 aa	Predicted RBP	13.07	□□□□□ -0.32
IRF3-223	ENST00000599223	NUFIP2	Q7Z417	695 aa	Known RBP	13.07	□□□□□ -0.32
IRF3-223	ENST00000599223	NUDCD3	Q8IVD9	361 aa		13.07	□□□□□ -0.32
IRF3-223	ENST00000599223	LILRA2	Q8N149	483 aa		13.07	□□□□□ -0.32
IRF3-223	ENST00000599223	GABRG1	Q8N1C3	465 aa		13.07	□□□□□ -0.32
IRF3-223	ENST00000599223	OR6Y1	Q8NGX8	325 aa		13.07	□□□□□ -0.32
IRF3-223	ENST00000599223	LILRB1	Q8NHL6	650 aa	Predicted RBP	13.07	□□□□□ -0.32
IRF3-223	ENST00000599223	CEP70	Q8NHQ1	597 aa		13.07	□□□□□ -0.32
IRF3-223	ENST00000599223	B4GALNT2	Q8NHY0	566 aa		13.07	□□□□□ -0.32
IRF3-223	ENST00000599223	TMEM171	Q8WVE6	324 aa		13.07	□□□□□ -0.32
IRF3-223	ENST00000599223	AKAP1	Q92667	903 aa	Known RBP eCLIP	13.07	□□□□□ -0.32
IRF3-223	ENST00000599223	NEUROG1	Q92886	237 aa		13.07	□□□□□ -0.32
IRF3-223	ENST00000599223	CCT8L2	Q96SF2	557 aa		13.07	□□□□□ -0.32
IRF3-223	ENST00000599223	ZCCHC3	Q9NUD5	404 aa	Known RBP	13.07	□□□□□ -0.32
IRF3-223	ENST00000599223	GIN1	Q9NXP7	522 aa		13.07	□□□□□ -0.32
IRF3-223	ENST00000599223	SLC17A7	Q9P2U7	560 aa		13.07	□□□□□ -0.32
IRF3-223	ENST00000599223	ABCA1	O95477	2261 aa		13.07	□□□□□ -0.32
IRF3-223	ENST00000599223		A0A1W2PQD3	144 aa		13.06	□□□□□ -0.32
IRF3-223	ENST00000599223	SCD	O00767	359 aa		13.06	□□□□□ -0.32
IRF3-223	ENST00000599223	SCAMP2	O15127	329 aa	Known RBP	13.06	□□□□□ -0.32
IRF3-223	ENST00000599223	SOX30	O94993	753 aa		13.06	□□□□□ -0.32
IRF3-223	ENST00000599223	HMGN2	P05204	90 aa	Known RBP	13.06	□□□□□ -0.32
IRF3-223	ENST00000599223	ALOX5	P09917	674 aa		13.06	□□□□□ -0.32
IRF3-223	ENST00000599223	BCKDHA	P12694	445 aa		13.06	□□□□□ -0.32
IRF3-223	ENST00000599223	ME2	P23368	584 aa		13.06	□□□□□ -0.32
IRF3-223	ENST00000599223	SEC24C	P53992	1094 aa		13.06	□□□□□ -0.32
IRF3-223	ENST00000599223	ATP5J2	P56134	94 aa		13.06	□□□□□ -0.32
IRF3-223	ENST00000599223	TOMM34	Q15785	309 aa	Predicted RBP	13.06	□□□□□ -0.32
IRF3-223	ENST00000599223	GKAP1	Q5VSY0	366 aa	Predicted RBP	13.06	□□□□□ -0.32
IRF3-223	ENST00000599223	BEND4	Q6ZU67	534 aa		13.06	□□□□□ -0.32
IRF3-223	ENST00000599223	LSR	Q86X29	649 aa	Predicted RBP	13.06	□□□□□ -0.32
IRF3-223	ENST00000599223	ZNF619	Q8N2I2	560 aa		13.06	□□□□□ -0.32
IRF3-223	ENST00000599223	ZNF611	Q8N823	705 aa		13.06	□□□□□ -0.32
IRF3-223	ENST00000599223	MAPK1IP1L	Q8NDC0	245 aa		13.06	□□□□□ -0.32
IRF3-223	ENST00000599223	OR7A2P	Q8NGA2	310 aa		13.06	□□□□□ -0.32
IRF3-223	ENST00000599223	OSTF1	Q92882	214 aa		13.06	□□□□□ -0.32
IRF3-223	ENST00000599223	BTBD2	Q9BX70	525 aa		13.06	□□□□□ -0.32
IRF3-223	ENST00000599223	MANSC1	Q9H8J5	431 aa		13.06	□□□□□ -0.32
IRF3-223	ENST00000599223	GLRX2	Q9NS18	164 aa		13.06	□□□□□ -0.32
IRF3-223	ENST00000599223	PAQR5	Q9NXK6	330 aa	Predicted RBP	13.06	□□□□□ -0.32
IRF3-223	ENST00000599223	KLHL13	Q9P2N7	655 aa		13.06	□□□□□ -0.32
IRF3-223	ENST00000599223	STOML1	Q9UBI4	398 aa		13.06	□□□□□ -0.32
IRF3-223	ENST00000599223	ICAM5	Q9UMF0	924 aa		13.06	□□□□□ -0.32
IRF3-223	ENST00000599223	GPR52	Q9Y2T5	361 aa		13.06	□□□□□ -0.32
IRF3-223	ENST00000599223	KCNE3	Q9Y6H6	103 aa		13.06	□□□□□ -0.32
IRF3-223	ENST00000599223	PLCE1	Q9P212	2302 aa		13.06	□□□□□ -0.32
IRF3-223	ENST00000599223	WDR91	A4D1P6	747 aa		13.05	□□□□□ -0.32
IRF3-223	ENST00000599223	PIP5K1B	O14986	540 aa		13.05	□□□□□ -0.32
IRF3-223	ENST00000599223	SOD3	P08294	240 aa		13.05	□□□□□ -0.32
IRF3-223	ENST00000599223	LAMP1	P11279	417 aa		13.05	□□□□□ -0.32
IRF3-223	ENST00000599223	EDNRA	P25101	427 aa		13.05	□□□□□ -0.32
IRF3-223	ENST00000599223	ELK4	P28324	431 aa		13.05	□□□□□ -0.32
IRF3-223	ENST00000599223	ALDH3A1	P30838	453 aa		13.05	□□□□□ -0.32
IRF3-223	ENST00000599223	ARRB2	P32121	409 aa		13.05	□□□□□ -0.32
IRF3-223	ENST00000599223	POU6F2	P78424	691 aa	Predicted RBP	13.05	□□□□□ -0.32
IRF3-223	ENST00000599223	TNK1	Q13470	666 aa		13.05	□□□□□ -0.32

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