RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 DHRS4L2Q6PKH6 230 aa11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 LYPD8Q6UX82 237 aa11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 ISLR2Q6UXK2 745 aa11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 ZNF836Q6ZNA1 936 aa11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 RTL4Q6ZR62 310 aa11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 FJX1Q86VR8 437 aa11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 VRK2Q86Y07 508 aa11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 CMIPQ8IY22 773 aa11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 CYP4Z2PQ8N1L4 340 aa11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 GEMIN6Q8WXD5 167 aaKnown RBP11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 PSMF1Q92530 271 aa11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 SLC47A1Q96FL8 570 aa11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 UTP23Q9BRU9 249 aaKnown RBP11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 DOHHQ9BU89 302 aa11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 GSX1Q9H4S2 264 aaPredicted RBP11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 HHATLQ9HCP6 504 aa11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 KLRF1Q9NZS2 232 aa11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 AURKCQ9UQB9 309 aa11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 SLC9A8Q9Y2E8 581 aa11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 CUBNO60494 3623 aa11.02□□□□□ -0.65
SHKBP1-213ENST00000597325 CENPVL1A0A0U1RR11 272 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 TCRBV5S2A0A599 114 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 PRAMEF25A6NGN4 478 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 NPIPB9F8W1W9 429 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 SYT5O00445 386 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 CDK2AP1O14519 115 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 SCO2O43819 266 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 ZNF354AO60765 605 aaPredicted RBP11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 FESP07332 822 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 CD247P20963 164 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 KCNJ5P48544 419 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 HLCSP50747 726 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 CRYBA2P53672 197 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 ELF3P78545 371 aaPredicted RBP11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 CHRNB3Q05901 458 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 MFAP5Q13361 173 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 FGFBP1Q14512 234 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 MAPK14Q16539 360 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 MRPL2Q5T653 305 aaKnown RBP11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 RNF220Q5VTB9 566 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 AP1ARQ63HQ0 302 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 ZFP1Q6P2D0 407 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 ENPP6Q6UWR7 440 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 LINC00696Q6ZRV3 163 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 MISPQ8IVT2 679 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 TMCO5AQ8N6Q1 288 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 OR10G3Q8NGC4 313 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 OR10Q1Q8NGQ4 319 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 OR4C3Q8NH37 302 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 PHOSPHO1Q8TCT1 267 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 HGDQ93099 445 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 C14orf79Q96F83 325 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 PYURFQ96I23 114 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 SGCZQ96LD1 299 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 SECISBP2Q96T21 854 aaKnown RBP11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 SEPHS2Q99611 448 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 OSBPL11Q9BXB4 747 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 MAGIXQ9H6Y5 334 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 YY1AP1Q9H869 796 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 EVA1AQ9H8M9 152 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 FLRT3Q9NZU0 649 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 SLC35A3Q9Y2D2 325 aa11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 PRRC2AP48634 2157 aaKnown RBP11.01□□□□□ -0.65
SHKBP1-213ENST00000597325 A0A1B0GUH1 482 aa11□□□□□ -0.65
SHKBP1-213ENST00000597325 A0A1W2PQD3 144 aa11□□□□□ -0.65
SHKBP1-213ENST00000597325 SERINC4A6NH21 518 aa11□□□□□ -0.65
SHKBP1-213ENST00000597325 GTPBP1O00178 669 aaKnown RBP11□□□□□ -0.65
SHKBP1-213ENST00000597325 NDUFB5O43674 189 aa11□□□□□ -0.65
SHKBP1-213ENST00000597325 ENTPD5O75356 428 aa11□□□□□ -0.65
SHKBP1-213ENST00000597325 CSTAP01040 98 aa11□□□□□ -0.65
SHKBP1-213ENST00000597325 P04436 131 aa11□□□□□ -0.65
SHKBP1-213ENST00000597325 IFNW1P05000 195 aa11□□□□□ -0.65
SHKBP1-213ENST00000597325 RAP2AP10114 183 aa11□□□□□ -0.65
SHKBP1-213ENST00000597325 UBL4AP11441 157 aa11□□□□□ -0.65
SHKBP1-213ENST00000597325 RNF144AP50876 292 aaPredicted RBP11□□□□□ -0.65
SHKBP1-213ENST00000597325 ART1P52961 327 aa11□□□□□ -0.65
SHKBP1-213ENST00000597325 RGS8P57771 180 aaPredicted RBP11□□□□□ -0.65
SHKBP1-213ENST00000597325 EEF1A1P68104 462 aaKnown RBP11□□□□□ -0.65
SHKBP1-213ENST00000597325 KCNJ10P78508 379 aa11□□□□□ -0.65
SHKBP1-213ENST00000597325 ARG2P78540 354 aa11□□□□□ -0.65
SHKBP1-213ENST00000597325 KLHL26Q53HC5 615 aa11□□□□□ -0.65
SHKBP1-213ENST00000597325 TBCELQ5QJ74 424 aa11□□□□□ -0.65
SHKBP1-213ENST00000597325 DESI1Q6ICB0 168 aa11□□□□□ -0.65
SHKBP1-213ENST00000597325 VTCN1Q7Z7D3 282 aa11□□□□□ -0.65
SHKBP1-213ENST00000597325 ZNF440Q8IYI8 595 aa11□□□□□ -0.65
SHKBP1-213ENST00000597325 ADGRG5Q8IZF4 528 aa11□□□□□ -0.65
SHKBP1-213ENST00000597325 FAM86B1Q8N7N1 296 aa11□□□□□ -0.65
SHKBP1-213ENST00000597325 GATSQ8NAP1 163 aa11□□□□□ -0.65
SHKBP1-213ENST00000597325 POGLUT1Q8NBL1 392 aa11□□□□□ -0.65
SHKBP1-213ENST00000597325 VANGL1Q8TAA9 524 aaPredicted RBP11□□□□□ -0.65
SHKBP1-213ENST00000597325 CANT1Q8WVQ1 401 aa11□□□□□ -0.65
SHKBP1-213ENST00000597325 RELTQ969Z4 430 aa11□□□□□ -0.65
SHKBP1-213ENST00000597325 ZG16BQ96DA0 208 aa11□□□□□ -0.65
SHKBP1-213ENST00000597325 NODALQ96S42 347 aa11□□□□□ -0.65
SHKBP1-213ENST00000597325 TIMMDC1Q9NPL8 285 aa11□□□□□ -0.65
SHKBP1-213ENST00000597325 SDHAF3Q9NRP4 125 aa11□□□□□ -0.65
SHKBP1-213ENST00000597325 ANKRD10Q9NXR5 420 aa11□□□□□ -0.65
SHKBP1-213ENST00000597325 KCNE5Q9UJ90 142 aa11□□□□□ -0.65
SHKBP1-213ENST00000597325 SH3GLB1Q9Y371 365 aa11□□□□□ -0.65
SHKBP1-213ENST00000597325 CPAMD8Q8IZJ3 1885 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms