RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 CENPVL1A0A0U1RR11 272 aa23.31■■□□□ 1.32
TRIM28-204ENST00000594806 OR2M5A3KFT3 312 aa23.31■■□□□ 1.32
TRIM28-204ENST00000594806 GMFGO60234 142 aa23.31■■□□□ 1.32
TRIM28-204ENST00000594806 DNAJA2O60884 412 aa23.31■■□□□ 1.32
TRIM28-204ENST00000594806 NUDT14O95848 222 aa23.31■■□□□ 1.32
TRIM28-204ENST00000594806 NID1P14543 1247 aa23.31■■□□□ 1.32
TRIM28-204ENST00000594806 LHX2P50458 406 aa23.31■■□□□ 1.32
TRIM28-204ENST00000594806 REP15Q6BDI9 236 aa23.31■■□□□ 1.32
TRIM28-204ENST00000594806 XKRXQ6PP77 449 aa23.31■■□□□ 1.32
TRIM28-204ENST00000594806 GPR119Q8TDV5 335 aa23.31■■□□□ 1.32
TRIM28-204ENST00000594806 WDR60Q8WVS4 1066 aa23.31■■□□□ 1.32
TRIM28-204ENST00000594806 LRRC58Q96CX6 371 aa23.31■■□□□ 1.32
TRIM28-204ENST00000594806 MYLK2Q9H1R3 596 aa23.31■■□□□ 1.32
TRIM28-204ENST00000594806 IKZF5Q9H5V7 419 aa23.31■■□□□ 1.32
TRIM28-204ENST00000594806 ZNF232Q9UNY5 417 aa23.31■■□□□ 1.32
TRIM28-204ENST00000594806 IFT52Q9Y366 437 aa23.31■■□□□ 1.32
TRIM28-204ENST00000594806 GPC6Q9Y625 555 aaPredicted RBP23.31■■□□□ 1.32
TRIM28-204ENST00000594806 LRRK2Q5S007 2527 aa23.31■■□□□ 1.32
TRIM28-204ENST00000594806 THBS1P07996 1170 aa23.3■■□□□ 1.32
TRIM28-204ENST00000594806 NUDT7P0C024 238 aa23.3■■□□□ 1.32
TRIM28-204ENST00000594806 LINGO3P0C6S8 592 aa23.3■■□□□ 1.32
TRIM28-204ENST00000594806 ETS2P15036 469 aa23.3■■□□□ 1.32
TRIM28-204ENST00000594806 ZNF708P17019 499 aa23.3■■□□□ 1.32
TRIM28-204ENST00000594806 EEFSECP57772 596 aaKnown RBP23.3■■□□□ 1.32
TRIM28-204ENST00000594806 RBBP4Q09028 425 aa23.3■■□□□ 1.32
TRIM28-204ENST00000594806 LARS2Q15031 903 aaKnown RBP23.3■■□□□ 1.32
TRIM28-204ENST00000594806 DCST1Q5T197 706 aa23.3■■□□□ 1.32
TRIM28-204ENST00000594806 REEP3Q6NUK4 255 aa23.3■■□□□ 1.32
TRIM28-204ENST00000594806 C3P1Q6ZMU1 363 aa23.3■■□□□ 1.32
TRIM28-204ENST00000594806 ZNF808Q8N4W9 903 aaPredicted RBP23.3■■□□□ 1.32
TRIM28-204ENST00000594806 TMCO5AQ8N6Q1 288 aa23.3■■□□□ 1.32
TRIM28-204ENST00000594806 OR8J3Q8NGG0 315 aa23.3■■□□□ 1.32
TRIM28-204ENST00000594806 QRSL1Q9H0R6 528 aaKnown RBP23.3■■□□□ 1.32
TRIM28-204ENST00000594806 ARMC7Q9H6L4 198 aa23.3■■□□□ 1.32
TRIM28-204ENST00000594806 ARL2BPQ9Y2Y0 163 aa23.3■■□□□ 1.32
TRIM28-204ENST00000594806 ZNF337Q9Y3M9 751 aa23.3■■□□□ 1.32
TRIM28-204ENST00000594806 DOPEY2Q9Y3R5 2298 aa23.3■■□□□ 1.32
TRIM28-204ENST00000594806 OIP5O43482 229 aa23.29■■□□□ 1.32
TRIM28-204ENST00000594806 ZG16O60844 167 aa23.29■■□□□ 1.32
TRIM28-204ENST00000594806 PGM3O95394 542 aa23.29■■□□□ 1.32
TRIM28-204ENST00000594806 EPPINO95925 133 aa23.29■■□□□ 1.32
TRIM28-204ENST00000594806 UBTFL6P0CB48 400 aaPredicted RBP23.29■■□□□ 1.32
TRIM28-204ENST00000594806 PGCP20142 388 aa23.29■■□□□ 1.32
TRIM28-204ENST00000594806 POU3F2P20265 443 aaPredicted RBP23.29■■□□□ 1.32
TRIM28-204ENST00000594806 SLC6A2P23975 617 aa23.29■■□□□ 1.32
TRIM28-204ENST00000594806 SLC6A8P48029 635 aa23.29■■□□□ 1.32
TRIM28-204ENST00000594806 CLDN18P56856 261 aa23.29■■□□□ 1.32
TRIM28-204ENST00000594806 CDK6Q00534 326 aa23.29■■□□□ 1.32
TRIM28-204ENST00000594806 LIN52Q52LA3 116 aa23.29■■□□□ 1.32
TRIM28-204ENST00000594806 RTL6Q6ICC9 239 aa23.29■■□□□ 1.32
TRIM28-204ENST00000594806 OR52P1PQ8NH57 321 aa23.29■■□□□ 1.32
TRIM28-204ENST00000594806 TMEM234Q8WY98 164 aa23.29■■□□□ 1.32
TRIM28-204ENST00000594806 RND1Q92730 232 aa23.29■■□□□ 1.32
TRIM28-204ENST00000594806 MAL2Q969L2 176 aa23.29■■□□□ 1.32
TRIM28-204ENST00000594806 MRGPRX4Q96LA9 322 aa23.29■■□□□ 1.32
TRIM28-204ENST00000594806 TTYH2Q9BSA4 534 aa23.29■■□□□ 1.32
TRIM28-204ENST00000594806 SPATA9Q9BWV2 254 aa23.29■■□□□ 1.32
TRIM28-204ENST00000594806 KAT8Q9H7Z6 458 aaKnown RBP23.29■■□□□ 1.32
TRIM28-204ENST00000594806 CALHM2Q9HA72 323 aa23.29■■□□□ 1.32
TRIM28-204ENST00000594806 FAM215AQ9Y5M1 114 aa23.29■■□□□ 1.32
TRIM28-204ENST00000594806 ETV2O00321 342 aaPredicted RBP23.28■■□□□ 1.32
TRIM28-204ENST00000594806 COX4I1P13073 169 aa23.28■■□□□ 1.32
TRIM28-204ENST00000594806 TCEA1P23193 301 aaKnown RBP23.28■■□□□ 1.32
TRIM28-204ENST00000594806 ELK4P28324 431 aa23.28■■□□□ 1.32
TRIM28-204ENST00000594806 STARP49675 285 aa23.28■■□□□ 1.32
TRIM28-204ENST00000594806 ADORA2A-AS1P86434 159 aa23.28■■□□□ 1.32
TRIM28-204ENST00000594806 SLC25A53Q5H9E4 307 aa23.28■■□□□ 1.32
TRIM28-204ENST00000594806 NANOGP8Q6NSW7 305 aa23.28■■□□□ 1.32
TRIM28-204ENST00000594806 SERPINA11Q86U17 422 aa23.28■■□□□ 1.32
TRIM28-204ENST00000594806 LACC1Q8IV20 430 aa23.28■■□□□ 1.32
TRIM28-204ENST00000594806 SLC30A8Q8IWU4 369 aa23.28■■□□□ 1.32
TRIM28-204ENST00000594806 ZNF440Q8IYI8 595 aa23.28■■□□□ 1.32
TRIM28-204ENST00000594806 MEIOBQ8N635 442 aa23.28■■□□□ 1.32
TRIM28-204ENST00000594806 ST8SIA1Q92185 356 aa23.28■■□□□ 1.32
TRIM28-204ENST00000594806 CMTM5Q96DZ9 223 aa23.28■■□□□ 1.32
TRIM28-204ENST00000594806 UCN2Q96RP3 112 aa23.28■■□□□ 1.32
TRIM28-204ENST00000594806 SPATA5L1Q9BVQ7 753 aa23.28■■□□□ 1.32
TRIM28-204ENST00000594806 NANOGQ9H9S0 305 aa23.28■■□□□ 1.32
TRIM28-204ENST00000594806 DOPEY1Q5JWR5 2465 aa23.28■■□□□ 1.32
TRIM28-204ENST00000594806 SPTBN1Q01082 2364 aaKnown RBP23.28■■□□□ 1.32
TRIM28-204ENST00000594806 TNFSF12-TNFSF13A0A0A6YY99 330 aa23.27■■□□□ 1.32
TRIM28-204ENST00000594806 CD8B2A6NJW9 211 aa23.27■■□□□ 1.32
TRIM28-204ENST00000594806 H0Y3Z8 333 aa23.27■■□□□ 1.32
TRIM28-204ENST00000594806 CYP7B1O75881 506 aa23.27■■□□□ 1.32
TRIM28-204ENST00000594806 PSMA4P25789 261 aaKnown RBP23.27■■□□□ 1.32
TRIM28-204ENST00000594806 PRDX6P30041 224 aa23.27■■□□□ 1.32
TRIM28-204ENST00000594806 RNF144AP50876 292 aaPredicted RBP23.27■■□□□ 1.32
TRIM28-204ENST00000594806 CCR4P51679 360 aa23.27■■□□□ 1.32
TRIM28-204ENST00000594806 MTPNP58546 118 aa23.27■■□□□ 1.32
TRIM28-204ENST00000594806 RAC1P63000 192 aa23.27■■□□□ 1.32
TRIM28-204ENST00000594806 SCARB2Q14108 478 aa23.27■■□□□ 1.32
TRIM28-204ENST00000594806 NDUFAF6Q330K2 333 aa23.27■■□□□ 1.32
TRIM28-204ENST00000594806 ACSF3Q4G176 576 aaPredicted RBP23.27■■□□□ 1.32
TRIM28-204ENST00000594806 RNF220Q5VTB9 566 aa23.27■■□□□ 1.32
TRIM28-204ENST00000594806 NSUN5P2Q63ZY6 315 aa23.27■■□□□ 1.32
TRIM28-204ENST00000594806 NET1Q7Z628 596 aaPredicted RBP23.27■■□□□ 1.32
TRIM28-204ENST00000594806 MRGPRGQ86SM5 289 aa23.27■■□□□ 1.32
TRIM28-204ENST00000594806 KRT73Q86Y46 540 aa23.27■■□□□ 1.32
TRIM28-204ENST00000594806 GRAMD2AQ8IUY3 354 aa23.27■■□□□ 1.32
TRIM28-204ENST00000594806 C10orf111Q8N326 155 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms