RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 ZNF441Q8N8Z8 693 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 RORBQ92753 470 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 ARHGDIGQ99819 225 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 DUSP21Q9H596 190 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 KLHL28Q9NXS3 571 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 KCND3Q9UK17 655 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 TRIM64BA6NI03 449 aa12.17□□□□□ -0.46
VRK3-205ENST00000593919 NPIPB9F8W1W9 429 aa12.17□□□□□ -0.46
VRK3-205ENST00000593919 CEACAM1P13688 526 aa12.17□□□□□ -0.46
VRK3-205ENST00000593919 LIMS1P48059 325 aa12.17□□□□□ -0.46
VRK3-205ENST00000593919 IDH2P48735 452 aaKnown RBP12.17□□□□□ -0.46
VRK3-205ENST00000593919 MASP1P48740 699 aa12.17□□□□□ -0.46
VRK3-205ENST00000593919 SLC26A5P58743 744 aa12.17□□□□□ -0.46
VRK3-205ENST00000593919 RPS18P62269 152 aaKnown RBP12.17□□□□□ -0.46
VRK3-205ENST00000593919 HSDL2Q6YN16 418 aa12.17□□□□□ -0.46
VRK3-205ENST00000593919 AHSA2Q719I0 299 aa12.17□□□□□ -0.46
VRK3-205ENST00000593919 P3H2Q8IVL5 708 aa12.17□□□□□ -0.46
VRK3-205ENST00000593919 PRR22Q8IZ63 422 aa12.17□□□□□ -0.46
VRK3-205ENST00000593919 AQP11Q8NBQ7 271 aa12.17□□□□□ -0.46
VRK3-205ENST00000593919 VMP1Q96GC9 406 aa12.17□□□□□ -0.46
VRK3-205ENST00000593919 ACAD8Q9UKU7 415 aa12.17□□□□□ -0.46
VRK3-205ENST00000593919 A4GNTQ9UNA3 340 aa12.17□□□□□ -0.46
VRK3-205ENST00000593919 HS3ST3B1Q9Y662 390 aa12.17□□□□□ -0.46
VRK3-205ENST00000593919 SPTBN2O15020 2390 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 CDHR4A6H8M9 788 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 TPST2O60704 377 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 BCL10O95999 233 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 CD63P08962 238 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 PSMB9P28065 219 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 ENTPD1P49961 510 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 NOVA1P51513 510 aaKnown RBP12.16□□□□□ -0.46
VRK3-205ENST00000593919 RGS8P57771 180 aaPredicted RBP12.16□□□□□ -0.46
VRK3-205ENST00000593919 HOXC5Q00444 222 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 NHLH1Q02575 133 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 PLAURQ03405 335 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 PIN1Q13526 163 aaPredicted RBP12.16□□□□□ -0.46
VRK3-205ENST00000593919 PCOLCEQ15113 449 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 SLC16A12Q6ZSM3 486 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 TMPRSS12Q86WS5 348 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 SVOPQ8N4V2 548 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 C17orf47Q8NEP4 570 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 OR4C3Q8NH37 302 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 DTNBP1Q96EV8 351 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 ALPK1Q96QP1 1244 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 GPN2Q9H9Y4 310 aaPredicted RBP12.16□□□□□ -0.46
VRK3-205ENST00000593919 NMNAT1Q9HAN9 279 aaPredicted RBP12.16□□□□□ -0.46
VRK3-205ENST00000593919 CCNB1IP1Q9NPC3 277 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 CTPS2Q9NRF8 586 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 ENPP5Q9UJA9 477 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 TCFL5Q9UL49 500 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 PCDHGB1Q9Y5G3 927 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 IGHV1-45A0A0A0MS14 117 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 TRBV11-1A0A0K0K1C0 115 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 M0R129 80 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 TO15178 435 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 BCAS1O75363 584 aaPredicted RBP12.16□□□□□ -0.46
VRK3-205ENST00000593919 IL33O95760 270 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 RAB40ALP0C0E4 278 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 ATP12AP54707 1039 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 SPCS2Q15005 226 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 ZNF141Q15928 474 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 CACTIN-AS1Q8N1I8 211 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 PARP8Q8N3A8 854 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 ESX1Q8N693 406 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 TBC1D15Q8TC07 691 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 THAP3Q8WTV1 239 aaPredicted RBP12.16□□□□□ -0.46
VRK3-205ENST00000593919 DIO2Q92813 273 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 PRRC1Q96M27 445 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 PRR14Q9BWN1 585 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 FLRT3Q9NZU0 649 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 DOCK10Q96BY6 2186 aa12.16□□□□□ -0.46
VRK3-205ENST00000593919 TRBV4-1A0A0J9YWV2 114 aa12.15□□□□□ -0.46
VRK3-205ENST00000593919 COX6A1P12074 109 aa12.15□□□□□ -0.46
VRK3-205ENST00000593919 CBLP22681 906 aa12.15□□□□□ -0.46
VRK3-205ENST00000593919 MMP11P24347 488 aa12.15□□□□□ -0.46
VRK3-205ENST00000593919 ABCD3P28288 659 aa12.15□□□□□ -0.46
VRK3-205ENST00000593919 HMGA2P52926 109 aa12.15□□□□□ -0.46
VRK3-205ENST00000593919 NUDT6P53370 316 aa12.15□□□□□ -0.46
VRK3-205ENST00000593919 PSMD4P55036 377 aaKnown RBP12.15□□□□□ -0.46
VRK3-205ENST00000593919 GABREP78334 506 aa12.15□□□□□ -0.46
VRK3-205ENST00000593919 PLCXD2Q0VAA5 305 aa12.15□□□□□ -0.46
VRK3-205ENST00000593919 AQP6Q13520 282 aa12.15□□□□□ -0.46
VRK3-205ENST00000593919 DGCR6Q14129 220 aa12.15□□□□□ -0.46
VRK3-205ENST00000593919 COLEC12Q5KU26 742 aa12.15□□□□□ -0.46
VRK3-205ENST00000593919 KIRREL2Q6UWL6 708 aa12.15□□□□□ -0.46
VRK3-205ENST00000593919 C16orf47Q6ZP98 133 aaPredicted RBP12.15□□□□□ -0.46
VRK3-205ENST00000593919 ANKRD13BQ86YJ7 626 aa12.15□□□□□ -0.46
VRK3-205ENST00000593919 CCDC103Q8IW40 242 aa12.15□□□□□ -0.46
VRK3-205ENST00000593919 NLGN4XQ8N0W4 816 aa12.15□□□□□ -0.46
VRK3-205ENST00000593919 NLGN4YQ8NFZ3 816 aaPredicted RBP12.15□□□□□ -0.46
VRK3-205ENST00000593919 NUBPLQ8TB37 319 aa12.15□□□□□ -0.46
VRK3-205ENST00000593919 IPCEF1Q8WWN9 437 aaPredicted RBP12.15□□□□□ -0.46
VRK3-205ENST00000593919 HSPBAP1Q96EW2 488 aa12.15□□□□□ -0.46
VRK3-205ENST00000593919 DHRS1Q96LJ7 313 aa12.15□□□□□ -0.46
VRK3-205ENST00000593919 ADOQ96SZ5 270 aa12.15□□□□□ -0.46
VRK3-205ENST00000593919 MRTO4Q9UKD2 239 aaKnown RBP12.15□□□□□ -0.46
VRK3-205ENST00000593919 FARSAQ9Y285 508 aaKnown RBP12.15□□□□□ -0.46
VRK3-205ENST00000593919 PCNX3Q9H6A9 2034 aa12.15□□□□□ -0.46
VRK3-205ENST00000593919 CPSF4LA6NMK7 179 aaKnown RBP12.14□□□□□ -0.47
VRK3-205ENST00000593919 SOCS6O14544 535 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms