RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 HOXD1Q9GZZ0 328 aa16.27■□□□□ 0.2
VAT1-208ENST00000590924 CLEC4MQ9H2X3 399 aaPredicted RBP16.27■□□□□ 0.2
VAT1-208ENST00000590924 CALHM2Q9HA72 323 aa16.27■□□□□ 0.2
VAT1-208ENST00000590924 HHATLQ9HCP6 504 aa16.27■□□□□ 0.2
VAT1-208ENST00000590924 GALNT9Q9HCQ5 603 aa16.27■□□□□ 0.2
VAT1-208ENST00000590924 KCNE3Q9Y6H6 103 aa16.27■□□□□ 0.2
VAT1-208ENST00000590924 ZFHX3Q15911 3703 aa16.27■□□□□ 0.19
VAT1-208ENST00000590924 PRAMEF25A6NGN4 478 aa16.26■□□□□ 0.19
VAT1-208ENST00000590924 IGKV1D-16P01601 117 aa16.26■□□□□ 0.19
VAT1-208ENST00000590924 CYP4B1P13584 511 aa16.26■□□□□ 0.19
VAT1-208ENST00000590924 CRATP43155 626 aa16.26■□□□□ 0.19
VAT1-208ENST00000590924 GNA13Q14344 377 aa16.26■□□□□ 0.19
VAT1-208ENST00000590924 KRT72Q14CN4 511 aa16.26■□□□□ 0.19
VAT1-208ENST00000590924 COX20Q5RI15 118 aa16.26■□□□□ 0.19
VAT1-208ENST00000590924 TNFAIP8L2Q6P589 184 aaPredicted RBP16.26■□□□□ 0.19
VAT1-208ENST00000590924 HACD2Q6Y1H2 254 aa16.26■□□□□ 0.19
VAT1-208ENST00000590924 YRDCQ86U90 279 aaKnown RBP16.26■□□□□ 0.19
VAT1-208ENST00000590924 FITM2Q8N6M3 262 aa16.26■□□□□ 0.19
VAT1-208ENST00000590924 METTL25Q8N6Q8 603 aa16.26■□□□□ 0.19
VAT1-208ENST00000590924 ZPLD1Q8TCW7 415 aa16.26■□□□□ 0.19
VAT1-208ENST00000590924 EFHD2Q96C19 240 aaPredicted RBP16.26■□□□□ 0.19
VAT1-208ENST00000590924 TRNT1Q96Q11 434 aaKnown RBP16.26■□□□□ 0.19
VAT1-208ENST00000590924 OR2B2Q9GZK3 357 aa16.26■□□□□ 0.19
VAT1-208ENST00000590924 SAP130Q9H0E3 1048 aa16.26■□□□□ 0.19
VAT1-208ENST00000590924 KLRF1Q9NZS2 232 aa16.26■□□□□ 0.19
VAT1-208ENST00000590924 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.26■□□□□ 0.19
VAT1-208ENST00000590924 ST6GALNAC2Q9UJ37 374 aa16.26■□□□□ 0.19
VAT1-208ENST00000590924 ABCG2Q9UNQ0 655 aa16.26■□□□□ 0.19
VAT1-208ENST00000590924 ZNF469Q96JG9 3925 aaPredicted RBP16.26■□□□□ 0.19
VAT1-208ENST00000590924 A6NNC1 897 aa16.25■□□□□ 0.19
VAT1-208ENST00000590924 STX11O75558 287 aa16.25■□□□□ 0.19
VAT1-208ENST00000590924 IL18BPO95998 194 aa16.25■□□□□ 0.19
VAT1-208ENST00000590924 CPN1P15169 458 aa16.25■□□□□ 0.19
VAT1-208ENST00000590924 ATP6V1C1P21283 382 aa16.25■□□□□ 0.19
VAT1-208ENST00000590924 TBXA2RP21731 343 aa16.25■□□□□ 0.19
VAT1-208ENST00000590924 CTSSP25774 331 aa16.25■□□□□ 0.19
VAT1-208ENST00000590924 GCKP35557 465 aa16.25■□□□□ 0.19
VAT1-208ENST00000590924 CLK3P49761 638 aaKnown RBP16.25■□□□□ 0.19
VAT1-208ENST00000590924 MNAT1P51948 309 aa16.25■□□□□ 0.19
VAT1-208ENST00000590924 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.25■□□□□ 0.19
VAT1-208ENST00000590924 NANOGP8Q6NSW7 305 aa16.25■□□□□ 0.19
VAT1-208ENST00000590924 FIGNL1Q6PIW4 674 aa16.25■□□□□ 0.19
VAT1-208ENST00000590924 C16orf62Q7Z3J2 963 aa16.25■□□□□ 0.19
VAT1-208ENST00000590924 KIF18BQ86Y91 864 aa16.25■□□□□ 0.19
VAT1-208ENST00000590924 POU5F2Q8N7G0 328 aa16.25■□□□□ 0.19
VAT1-208ENST00000590924 OR8J3Q8NGG0 315 aa16.25■□□□□ 0.19
VAT1-208ENST00000590924 PNPT1Q8TCS8 783 aaKnown RBP16.25■□□□□ 0.19
VAT1-208ENST00000590924 RAB8BQ92930 207 aa16.25■□□□□ 0.19
VAT1-208ENST00000590924 RCN3Q96D15 328 aa16.25■□□□□ 0.19
VAT1-208ENST00000590924 OTUB1Q96FW1 271 aaPredicted RBP16.25■□□□□ 0.19
VAT1-208ENST00000590924 HOPXQ9BPY8 73 aaPredicted RBP16.25■□□□□ 0.19
VAT1-208ENST00000590924 CPPED1Q9BRF8 314 aaPredicted RBP16.25■□□□□ 0.19
VAT1-208ENST00000590924 NANOGQ9H9S0 305 aa16.25■□□□□ 0.19
VAT1-208ENST00000590924 UBQLN4Q9NRR5 601 aa16.25■□□□□ 0.19
VAT1-208ENST00000590924 CCM2LQ9NUG4 571 aaPredicted RBP16.25■□□□□ 0.19
VAT1-208ENST00000590924 CALML5Q9NZT1 146 aa16.25■□□□□ 0.19
VAT1-208ENST00000590924 AP3M1Q9Y2T2 418 aa16.25■□□□□ 0.19
VAT1-208ENST00000590924 ACANP16112 2415 aa16.25■□□□□ 0.19
VAT1-208ENST00000590924 TMEM247A6NEH6 219 aa16.24■□□□□ 0.19
VAT1-208ENST00000590924 FADS1O60427 444 aa16.24■□□□□ 0.19
VAT1-208ENST00000590924 TNFRSF21O75509 655 aa16.24■□□□□ 0.19
VAT1-208ENST00000590924 CBR3O75828 277 aa16.24■□□□□ 0.19
VAT1-208ENST00000590924 UTS2O95399 124 aa16.24■□□□□ 0.19
VAT1-208ENST00000590924 C1QCP02747 245 aa16.24■□□□□ 0.19
VAT1-208ENST00000590924 ETFAP13804 333 aa16.24■□□□□ 0.19
VAT1-208ENST00000590924 OPRM1P35372 400 aa16.24■□□□□ 0.19
VAT1-208ENST00000590924 CASP9P55211 416 aa16.24■□□□□ 0.19
VAT1-208ENST00000590924 DSTNP60981 165 aa16.24■□□□□ 0.19
VAT1-208ENST00000590924 SORDQ00796 357 aa16.24■□□□□ 0.19
VAT1-208ENST00000590924 DAZAP2Q15038 168 aaPredicted RBP16.24■□□□□ 0.19
VAT1-208ENST00000590924 ENPP6Q6UWR7 440 aa16.24■□□□□ 0.19
VAT1-208ENST00000590924 WDSUB1Q8N9V3 476 aa16.24■□□□□ 0.19
VAT1-208ENST00000590924 ZFP3Q96NJ6 502 aa16.24■□□□□ 0.19
VAT1-208ENST00000590924 THUMPD3Q9BV44 507 aaKnown RBP16.24■□□□□ 0.19
VAT1-208ENST00000590924 ZNF350Q9GZX5 532 aa16.24■□□□□ 0.19
VAT1-208ENST00000590924 LIME1Q9H400 295 aa16.24■□□□□ 0.19
VAT1-208ENST00000590924 FBXO34Q9NWN3 711 aa16.24■□□□□ 0.19
VAT1-208ENST00000590924 JKAMPQ9P055 326 aa16.24■□□□□ 0.19
VAT1-208ENST00000590924 P2RX2Q9UBL9 471 aa16.24■□□□□ 0.19
VAT1-208ENST00000590924 TAGLN3Q9UI15 199 aa16.24■□□□□ 0.19
VAT1-208ENST00000590924 EDARQ9UNE0 448 aa16.24■□□□□ 0.19
VAT1-208ENST00000590924 C2orf72A6NCS6 295 aa16.23■□□□□ 0.19
VAT1-208ENST00000590924 TUBAL3A6NHL2 446 aa16.23■□□□□ 0.19
VAT1-208ENST00000590924 FXYD1O00168 92 aa16.23■□□□□ 0.19
VAT1-208ENST00000590924 AIM2O14862 343 aa16.23■□□□□ 0.19
VAT1-208ENST00000590924 TFPTP0C1Z6 253 aa16.23■□□□□ 0.19
VAT1-208ENST00000590924 ATP12AP54707 1039 aa16.23■□□□□ 0.19
VAT1-208ENST00000590924 CCNJQ5T5M9 372 aa16.23■□□□□ 0.19
VAT1-208ENST00000590924 PRAMEF8Q5VWM4 474 aa16.23■□□□□ 0.19
VAT1-208ENST00000590924 PRAMEF7Q5VXH5 474 aa16.23■□□□□ 0.19
VAT1-208ENST00000590924 LRRC74BQ6ZQY2 392 aa16.23■□□□□ 0.19
VAT1-208ENST00000590924 ARPINQ7Z6K5 226 aa16.23■□□□□ 0.19
VAT1-208ENST00000590924 ADGRE4PQ86SQ3 457 aa16.23■□□□□ 0.19
VAT1-208ENST00000590924 IFNEQ86WN2 208 aa16.23■□□□□ 0.19
VAT1-208ENST00000590924 CDC20BQ86Y33 519 aa16.23■□□□□ 0.19
VAT1-208ENST00000590924 C9orf106Q8NAJ2 232 aa16.23■□□□□ 0.19
VAT1-208ENST00000590924 OR14L1PQ8NHC6 308 aa16.23■□□□□ 0.19
VAT1-208ENST00000590924 DTNBP1Q96EV8 351 aa16.23■□□□□ 0.19
VAT1-208ENST00000590924 TUBA1CQ9BQE3 449 aa16.23■□□□□ 0.19
VAT1-208ENST00000590924 TMEM38AQ9H6F2 299 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms