RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 SPTBN1Q01082 2364 aaKnown RBP12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 PRRC2CQ9Y520 2896 aaKnown RBP12.5□□□□□ -0.41
PRKCSH-202ENST00000585540 TRBV5-3A0A0A0MS03 114 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 A0A0G2JPF8 293 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 AGAP5A6NIR3 686 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 HNRNPCL2B2RXH8 293 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 HNRNPCL3B7ZW38 293 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 FAAHO00519 579 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 HNRNPCL1O60812 293 aaKnown RBP12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 TNFRSF21O75509 655 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 CRHP06850 196 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 HNRNPCL4P0DMR1 293 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 GLI4P10075 376 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 CEACAM8P31997 349 aaPredicted RBP12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 MAP2K6P52564 334 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 DLX5P56178 289 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 CLDN18P56856 261 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 NUP107P57740 925 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 RAC1P63000 192 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 KCNJ10P78508 379 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 RBBP4Q09028 425 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 SELENBP1Q13228 472 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 RTL6Q6ICC9 239 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 OR2A2Q6IF42 318 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 ESPNLQ6ZVH7 1005 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 PIGWQ7Z7B1 504 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 DHDDSQ86SQ9 333 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 RETREG3Q86VR2 466 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 SLC30A8Q8IWU4 369 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 MSRB3Q8IXL7 192 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 MARVELD2Q8N4S9 558 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 GATSQ8NAP1 163 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 BHLHE22Q8NFJ8 381 aaPredicted RBP12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 WDR60Q8WVS4 1066 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 WNT2BQ93097 391 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 SH3GL1Q99961 368 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 SPATA9Q9BWV2 254 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 TMEM38AQ9H6F2 299 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 SLC25A37Q9NYZ2 338 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 FOXD3Q9UJU5 478 aaPredicted RBP12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 VDAC3Q9Y277 283 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 HRH3Q9Y5N1 445 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 SPIN1Q9Y657 262 aaPredicted RBP12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 CAPN7Q9Y6W3 813 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 PTPN13Q12923 2485 aa12.49□□□□□ -0.41
PRKCSH-202ENST00000585540 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.48□□□□□ -0.41
PRKCSH-202ENST00000585540 B4DXG7 233 aa12.48□□□□□ -0.41
PRKCSH-202ENST00000585540 DVL2O14641 736 aa12.48□□□□□ -0.41
PRKCSH-202ENST00000585540 FCMRO60667 390 aa12.48□□□□□ -0.41
PRKCSH-202ENST00000585540 NUDT14O95848 222 aa12.48□□□□□ -0.41
PRKCSH-202ENST00000585540 LINGO3P0C6S8 592 aa12.48□□□□□ -0.41
PRKCSH-202ENST00000585540 NID1P14543 1247 aa12.48□□□□□ -0.41
PRKCSH-202ENST00000585540 ETS2P15036 469 aa12.48□□□□□ -0.41
PRKCSH-202ENST00000585540 IL7RP16871 459 aa12.48□□□□□ -0.41
PRKCSH-202ENST00000585540 GPX2P18283 190 aa12.48□□□□□ -0.41
PRKCSH-202ENST00000585540 PGM1P36871 562 aa12.48□□□□□ -0.41
PRKCSH-202ENST00000585540 CHRNEQ04844 493 aa12.48□□□□□ -0.41
PRKCSH-202ENST00000585540 PMPCAQ10713 525 aa12.48□□□□□ -0.41
PRKCSH-202ENST00000585540 SKP2Q13309 424 aa12.48□□□□□ -0.41
PRKCSH-202ENST00000585540 LARS2Q15031 903 aaKnown RBP12.48□□□□□ -0.41
PRKCSH-202ENST00000585540 RNF220Q5VTB9 566 aa12.48□□□□□ -0.41
PRKCSH-202ENST00000585540 MTDHQ86UE4 582 aaKnown RBP12.48□□□□□ -0.41
PRKCSH-202ENST00000585540 SNX32Q86XE0 403 aa12.48□□□□□ -0.41
PRKCSH-202ENST00000585540 GRAMD2AQ8IUY3 354 aa12.48□□□□□ -0.41
PRKCSH-202ENST00000585540 TMCO5AQ8N6Q1 288 aa12.48□□□□□ -0.41
PRKCSH-202ENST00000585540 PCYOX1LQ8NBM8 494 aa12.48□□□□□ -0.41
PRKCSH-202ENST00000585540 LILRB4Q8NHJ6 448 aa12.48□□□□□ -0.41
PRKCSH-202ENST00000585540 SLC25A43Q8WUT9 341 aaPredicted RBP12.48□□□□□ -0.41
PRKCSH-202ENST00000585540 SH3YL1Q96HL8 342 aaPredicted RBP12.48□□□□□ -0.41
PRKCSH-202ENST00000585540 CCT8L2Q96SF2 557 aa12.48□□□□□ -0.41
PRKCSH-202ENST00000585540 SPATA5L1Q9BVQ7 753 aa12.48□□□□□ -0.41
PRKCSH-202ENST00000585540 ALKBH4Q9NXW9 302 aa12.48□□□□□ -0.41
PRKCSH-202ENST00000585540 RNF6Q9Y252 685 aa12.48□□□□□ -0.41
PRKCSH-202ENST00000585540 CARD8Q9Y2G2 431 aa12.48□□□□□ -0.41
PRKCSH-202ENST00000585540 RPH3AQ9Y2J0 694 aaPredicted RBP12.48□□□□□ -0.41
PRKCSH-202ENST00000585540 AP3M1Q9Y2T2 418 aa12.48□□□□□ -0.41
PRKCSH-202ENST00000585540 NPIPA5A0A0B4J1W7 369 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 PRAMEF27A3QJZ7 478 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 C5orf58C9J3I9 102 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 NPIPA7E9PJI5 369 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 H3BML4 177 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 FBP2O00757 339 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 BCHEP06276 602 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 CHRM4P08173 479 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 TFPTP0C1Z6 253 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 RNF224P0DH78 156 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 NPIPA8P0DM63 369 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 ETFAP13804 333 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 OPRM1P35372 400 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 HTR3AP46098 478 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 NFYCQ13952 458 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 SYPL1Q16563 259 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 TRMT5Q32P41 509 aaKnown RBP12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 COX20Q5RI15 118 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 DCST1Q5T197 706 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 GCNT6Q5T4J0 391 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 REP15Q6BDI9 236 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 C3orf33Q6P1S2 294 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 OLIG3Q7RTU3 272 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms