RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 SEPHS2Q99611 448 aa8.69□□□□□ -1.02
RFFL-210ENST00000582308 FAM173AQ9BQD7 235 aa8.69□□□□□ -1.02
RFFL-210ENST00000582308 ARHGAP9Q9BRR9 750 aa8.69□□□□□ -1.02
RFFL-210ENST00000582308 PRR14Q9BWN1 585 aa8.69□□□□□ -1.02
RFFL-210ENST00000582308 MFRPQ9BY79 579 aa8.69□□□□□ -1.02
RFFL-210ENST00000582308 ADNPQ9H2P0 1102 aa8.69□□□□□ -1.02
RFFL-210ENST00000582308 DSN1Q9H410 356 aa8.69□□□□□ -1.02
RFFL-210ENST00000582308 ARMC7Q9H6L4 198 aa8.69□□□□□ -1.02
RFFL-210ENST00000582308 EXOSC3Q9NQT5 275 aaKnown RBP8.69□□□□□ -1.02
RFFL-210ENST00000582308 ZNF71Q9NQZ8 489 aaPredicted RBP8.69□□□□□ -1.02
RFFL-210ENST00000582308 SDHAF3Q9NRP4 125 aa8.69□□□□□ -1.02
RFFL-210ENST00000582308 KLHL28Q9NXS3 571 aa8.69□□□□□ -1.02
RFFL-210ENST00000582308 TUBA8Q9NY65 449 aaPredicted RBP8.69□□□□□ -1.02
RFFL-210ENST00000582308 MED11Q9P086 117 aa8.69□□□□□ -1.02
RFFL-210ENST00000582308 PPP4R1LQ9P1A2 415 aa8.69□□□□□ -1.02
RFFL-210ENST00000582308 TUBD1Q9UJT1 453 aa8.69□□□□□ -1.02
RFFL-210ENST00000582308 ANAPC2Q9UJX6 822 aa8.69□□□□□ -1.02
RFFL-210ENST00000582308 FBXL2Q9UKC9 423 aa8.69□□□□□ -1.02
RFFL-210ENST00000582308 SLC13A4Q9UKG4 626 aa8.69□□□□□ -1.02
RFFL-210ENST00000582308 ICAM5Q9UMF0 924 aa8.69□□□□□ -1.02
RFFL-210ENST00000582308 NTNG1Q9Y2I2 539 aa8.69□□□□□ -1.02
RFFL-210ENST00000582308 KLF13Q9Y2Y9 288 aaPredicted RBP8.69□□□□□ -1.02
RFFL-210ENST00000582308 PCDHGB6Q9Y5F9 930 aa8.69□□□□□ -1.02
RFFL-210ENST00000582308 BSNQ9UPA5 3926 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 DHRS12A0PJE2 317 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 AP3D1O14617 1153 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 GNB5O14775 395 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 GMFGO60234 142 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 SEMA7AO75326 666 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 ENTPD5O75356 428 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 GPIP06744 558 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 RFPL3SP0C7P2 107 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 UMPSP11172 480 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 RYKP34925 604 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 MEOX1P50221 254 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 P2RX1P51575 399 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 RGS8P57771 180 aaPredicted RBP8.68□□□□□ -1.02
RFFL-210ENST00000582308 VLDLRP98155 873 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 ZNF169Q14929 603 aaPredicted RBP8.68□□□□□ -1.02
RFFL-210ENST00000582308 PLEKHN1Q494U1 663 aaPredicted RBP8.68□□□□□ -1.02
RFFL-210ENST00000582308 IQCCQ4KMZ1 466 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 TIGD3Q6B0B8 471 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.68□□□□□ -1.02
RFFL-210ENST00000582308 PLCZ1Q86YW0 608 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 ZNF440Q8IYI8 595 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 TMCO5AQ8N6Q1 288 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 TMEM178AQ8NBL3 297 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 OR2M3Q8NG83 312 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 OR1J4Q8NGS1 313 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 OR5W2Q8NH69 310 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 B4GALNT2Q8NHY0 566 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 VANGL1Q8TAA9 524 aaPredicted RBP8.68□□□□□ -1.02
RFFL-210ENST00000582308 GPR119Q8TDV5 335 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 GEMIN6Q8WXD5 167 aaKnown RBP8.68□□□□□ -1.02
RFFL-210ENST00000582308 POP5Q969H6 163 aaKnown RBP8.68□□□□□ -1.02
RFFL-210ENST00000582308 SLC47A1Q96FL8 570 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 ZNF597Q96LX8 424 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 JSRP1Q96MG2 331 aaPredicted RBP8.68□□□□□ -1.02
RFFL-210ENST00000582308 UGT2B28Q9BY64 529 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 AMBRA1Q9C0C7 1298 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 MAGIXQ9H6Y5 334 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 IL1RAPQ9NPH3 570 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 CCM2LQ9NUG4 571 aaPredicted RBP8.68□□□□□ -1.02
RFFL-210ENST00000582308 SLC9A8Q9Y2E8 581 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 ZGRF1Q86YA3 2104 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 SPTA1P02549 2419 aa8.68□□□□□ -1.02
RFFL-210ENST00000582308 ANKUB1A6NFN9 424 aa8.67□□□□□ -1.02
RFFL-210ENST00000582308 KLRC4-KLRK1H3BQV0 150 aa8.67□□□□□ -1.02
RFFL-210ENST00000582308 hCG_2039718K7EN88 272 aa8.67□□□□□ -1.02
RFFL-210ENST00000582308 DPM1O60762 260 aa8.67□□□□□ -1.02
RFFL-210ENST00000582308 GLSO94925 669 aaPredicted RBP8.67□□□□□ -1.02
RFFL-210ENST00000582308 MT-ND1P03886 318 aa8.67□□□□□ -1.02
RFFL-210ENST00000582308 IFNW1P05000 195 aa8.67□□□□□ -1.02
RFFL-210ENST00000582308 LINGO3P0C6S8 592 aa8.67□□□□□ -1.02
RFFL-210ENST00000582308 PSMA4P25789 261 aaKnown RBP8.67□□□□□ -1.02
RFFL-210ENST00000582308 HTR2AP28223 471 aa8.67□□□□□ -1.02
RFFL-210ENST00000582308 MSX1P28360 303 aa8.67□□□□□ -1.02
RFFL-210ENST00000582308 SLC7A1P30825 629 aa8.67□□□□□ -1.02
RFFL-210ENST00000582308 RFC3P40938 356 aa8.67□□□□□ -1.02
RFFL-210ENST00000582308 MASP1P48740 699 aa8.67□□□□□ -1.02
RFFL-210ENST00000582308 CCR4P51679 360 aa8.67□□□□□ -1.02
RFFL-210ENST00000582308 ELF3P78545 371 aaPredicted RBP8.67□□□□□ -1.02
RFFL-210ENST00000582308 PMP22Q01453 160 aa8.67□□□□□ -1.02
RFFL-210ENST00000582308 KCNC4Q03721 635 aa8.67□□□□□ -1.02
RFFL-210ENST00000582308 CHRNB3Q05901 458 aa8.67□□□□□ -1.02
RFFL-210ENST00000582308 EPS8Q12929 822 aa8.67□□□□□ -1.02
RFFL-210ENST00000582308 TOMM34Q15785 309 aaPredicted RBP8.67□□□□□ -1.02
RFFL-210ENST00000582308 NADK2Q4G0N4 442 aa8.67□□□□□ -1.02
RFFL-210ENST00000582308 FAM98BQ52LJ0 330 aaKnown RBP8.67□□□□□ -1.02
RFFL-210ENST00000582308 RNFT1Q5M7Z0 435 aa8.67□□□□□ -1.02
RFFL-210ENST00000582308 SLC6A19Q695T7 634 aa8.67□□□□□ -1.02
RFFL-210ENST00000582308 PCSK4Q6UW60 755 aa8.67□□□□□ -1.02
RFFL-210ENST00000582308 ARSKQ6UWY0 536 aa8.67□□□□□ -1.02
RFFL-210ENST00000582308 ZNF550Q7Z398 422 aa8.67□□□□□ -1.02
RFFL-210ENST00000582308 ZFP62Q8NB50 900 aaPredicted RBP8.67□□□□□ -1.02
RFFL-210ENST00000582308 PAPD5Q8NDF8 572 aaKnown RBP8.67□□□□□ -1.02
RFFL-210ENST00000582308 TOR1AIP2Q8NFQ8 470 aa8.67□□□□□ -1.02
RFFL-210ENST00000582308 OR4K17Q8NGC6 315 aa8.67□□□□□ -1.02
RFFL-210ENST00000582308 PHF10Q8WUB8 498 aaKnown RBP8.67□□□□□ -1.02
RFFL-210ENST00000582308 PYDC1Q8WXC3 89 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms