RNA–Protein interactions for RNA: ENST00000580234.1

BRD2-215, Transcript of bromodomain containing 2, humanhuman

TSL 4

Gene BRD2, Length 718 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2-215ENST00000580234 SPATA21Q7Z572 469 aa16.71■□□□□ 0.27
BRD2-215ENST00000580234 DHDDSQ86SQ9 333 aa16.71■□□□□ 0.27
BRD2-215ENST00000580234 LACC1Q8IV20 430 aa16.71■□□□□ 0.27
BRD2-215ENST00000580234 RPRMLQ8N4K4 120 aa16.71■□□□□ 0.27
BRD2-215ENST00000580234 ZNF614Q8N883 585 aa16.71■□□□□ 0.27
BRD2-215ENST00000580234 ELAC2Q9BQ52 826 aaKnown RBP16.71■□□□□ 0.27
BRD2-215ENST00000580234 CPPED1Q9BRF8 314 aaPredicted RBP16.71■□□□□ 0.27
BRD2-215ENST00000580234 TMEM38AQ9H6F2 299 aa16.71■□□□□ 0.27
BRD2-215ENST00000580234 EXOSC3Q9NQT5 275 aaKnown RBP16.71■□□□□ 0.27
BRD2-215ENST00000580234 FAM53CQ9NYF3 392 aa16.71■□□□□ 0.27
BRD2-215ENST00000580234 CAMK2AQ9UQM7 478 aa16.71■□□□□ 0.27
BRD2-215ENST00000580234 PHF3Q92576 2039 aaKnown RBP16.7■□□□□ 0.26
BRD2-215ENST00000580234 BBIP1A8MTZ0 92 aa16.7■□□□□ 0.26
BRD2-215ENST00000580234 SNX3O60493 162 aa16.7■□□□□ 0.26
BRD2-215ENST00000580234 GYS2P54840 703 aa16.7■□□□□ 0.26
BRD2-215ENST00000580234 EEFSECP57772 596 aaKnown RBP16.7■□□□□ 0.26
BRD2-215ENST00000580234 CBFBQ13951 182 aa16.7■□□□□ 0.26
BRD2-215ENST00000580234 RIPPLY2Q5TAB7 128 aa16.7■□□□□ 0.26
BRD2-215ENST00000580234 CPLX4Q7Z7G2 160 aa16.7■□□□□ 0.26
BRD2-215ENST00000580234 PEX5LQ8IYB4 626 aa16.7■□□□□ 0.26
BRD2-215ENST00000580234 ASB5Q8WWX0 329 aa16.7■□□□□ 0.26
BRD2-215ENST00000580234 TREX2Q9BQ50 279 aaPredicted RBP16.7■□□□□ 0.26
BRD2-215ENST00000580234 KLHDC3Q9BQ90 382 aa16.7■□□□□ 0.26
BRD2-215ENST00000580234 NSRP1Q9H0G5 558 aaKnown RBP16.7■□□□□ 0.26
BRD2-215ENST00000580234 COQ3Q9NZJ6 369 aa16.7■□□□□ 0.26
BRD2-215ENST00000580234 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.7■□□□□ 0.26
BRD2-215ENST00000580234 VDAC3Q9Y277 283 aa16.7■□□□□ 0.26
BRD2-215ENST00000580234 KLF2Q9Y5W3 355 aaPredicted RBP16.7■□□□□ 0.26
BRD2-215ENST00000580234 GPC6Q9Y625 555 aaPredicted RBP16.7■□□□□ 0.26
BRD2-215ENST00000580234 CAPN7Q9Y6W3 813 aa16.7■□□□□ 0.26
BRD2-215ENST00000580234 NTN1O95631 604 aa16.69■□□□□ 0.26
BRD2-215ENST00000580234 BCHEP06276 602 aa16.69■□□□□ 0.26
BRD2-215ENST00000580234 NUDT7P0C024 238 aa16.69■□□□□ 0.26
BRD2-215ENST00000580234 ARAFP10398 606 aa16.69■□□□□ 0.26
BRD2-215ENST00000580234 NID1P14543 1247 aa16.69■□□□□ 0.26
BRD2-215ENST00000580234 POU3F2P20265 443 aaPredicted RBP16.69■□□□□ 0.26
BRD2-215ENST00000580234 CEACAM8P31997 349 aaPredicted RBP16.69■□□□□ 0.26
BRD2-215ENST00000580234 DLX5P56178 289 aa16.69■□□□□ 0.26
BRD2-215ENST00000580234 RAC1P63000 192 aa16.69■□□□□ 0.26
BRD2-215ENST00000580234 GNGT1P63211 74 aa16.69■□□□□ 0.26
BRD2-215ENST00000580234 NFYCQ13952 458 aa16.69■□□□□ 0.26
BRD2-215ENST00000580234 CYLC2Q14093 348 aaPredicted RBP16.69■□□□□ 0.26
BRD2-215ENST00000580234 GCNT6Q5T4J0 391 aa16.69■□□□□ 0.26
BRD2-215ENST00000580234 SEM1Q6ZVN7 128 aa16.69■□□□□ 0.26
BRD2-215ENST00000580234 NCCRP1Q6ZVX7 275 aaPredicted RBP16.69■□□□□ 0.26
BRD2-215ENST00000580234 MAMDC2Q7Z304 686 aaPredicted RBP16.69■□□□□ 0.26
BRD2-215ENST00000580234 LILRB4Q8NHJ6 448 aa16.69■□□□□ 0.26
BRD2-215ENST00000580234 POC1BQ8TC44 478 aa16.69■□□□□ 0.26
BRD2-215ENST00000580234 TMEM19Q96HH6 336 aa16.69■□□□□ 0.26
BRD2-215ENST00000580234 MRGPRX4Q96LA9 322 aa16.69■□□□□ 0.26
BRD2-215ENST00000580234 TUBA1CQ9BQE3 449 aa16.69■□□□□ 0.26
BRD2-215ENST00000580234 QRSL1Q9H0R6 528 aaKnown RBP16.69■□□□□ 0.26
BRD2-215ENST00000580234 IKZF5Q9H5V7 419 aa16.69■□□□□ 0.26
BRD2-215ENST00000580234 IFT52Q9Y366 437 aa16.69■□□□□ 0.26
BRD2-215ENST00000580234 MED12Q93074 2177 aa16.69■□□□□ 0.26
BRD2-215ENST00000580234 PCNX1Q96RV3 2341 aa16.68■□□□□ 0.26
BRD2-215ENST00000580234 USP9YO00507 2555 aaPredicted RBP16.68■□□□□ 0.26
BRD2-215ENST00000580234 COL12A1Q99715 3063 aa16.68■□□□□ 0.26
BRD2-215ENST00000580234 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.68■□□□□ 0.26
BRD2-215ENST00000580234 MBD3L4A6NDZ8 208 aaPredicted RBP16.68■□□□□ 0.26
BRD2-215ENST00000580234 MBD3L3A6NE82 208 aaPredicted RBP16.68■□□□□ 0.26
BRD2-215ENST00000580234 MBD3L5A6NJ08 208 aaPredicted RBP16.68■□□□□ 0.26
BRD2-215ENST00000580234 GMFGO60234 142 aa16.68■□□□□ 0.26
BRD2-215ENST00000580234 PGM3O95394 542 aa16.68■□□□□ 0.26
BRD2-215ENST00000580234 CLDN1O95832 211 aa16.68■□□□□ 0.26
BRD2-215ENST00000580234 THBS1P07996 1170 aa16.68■□□□□ 0.26
BRD2-215ENST00000580234 ETS2P15036 469 aa16.68■□□□□ 0.26
BRD2-215ENST00000580234 IL7RP16871 459 aa16.68■□□□□ 0.26
BRD2-215ENST00000580234 PGCP20142 388 aa16.68■□□□□ 0.26
BRD2-215ENST00000580234 TCEA1P23193 301 aaKnown RBP16.68■□□□□ 0.26
BRD2-215ENST00000580234 ELK4P28324 431 aa16.68■□□□□ 0.26
BRD2-215ENST00000580234 CHRNB4P30926 498 aa16.68■□□□□ 0.26
BRD2-215ENST00000580234 CLDN15P56746 228 aa16.68■□□□□ 0.26
BRD2-215ENST00000580234 ADRM1Q16186 407 aa16.68■□□□□ 0.26
BRD2-215ENST00000580234 TRMT5Q32P41 509 aaKnown RBP16.68■□□□□ 0.26
BRD2-215ENST00000580234 NDUFAF6Q330K2 333 aa16.68■□□□□ 0.26
BRD2-215ENST00000580234 GRAMD2AQ8IUY3 354 aa16.68■□□□□ 0.26
BRD2-215ENST00000580234 MEIOBQ8N635 442 aa16.68■□□□□ 0.26
BRD2-215ENST00000580234 OR5M1Q8NGP8 315 aa16.68■□□□□ 0.26
BRD2-215ENST00000580234 OR52P1PQ8NH57 321 aa16.68■□□□□ 0.26
BRD2-215ENST00000580234 MBD3L2Q8NHZ7 208 aaPredicted RBP16.68■□□□□ 0.26
BRD2-215ENST00000580234 RP9Q8TA86 221 aaKnown RBP16.68■□□□□ 0.26
BRD2-215ENST00000580234 BBS10Q8TAM1 723 aa16.68■□□□□ 0.26
BRD2-215ENST00000580234 WDR60Q8WVS4 1066 aa16.68■□□□□ 0.26
BRD2-215ENST00000580234 ST8SIA1Q92185 356 aa16.68■□□□□ 0.26
BRD2-215ENST00000580234 SH3GL1Q99961 368 aa16.68■□□□□ 0.26
BRD2-215ENST00000580234 THUMPD3Q9BV44 507 aaKnown RBP16.68■□□□□ 0.26
BRD2-215ENST00000580234 CCDC106Q9BWC9 280 aa16.68■□□□□ 0.26
BRD2-215ENST00000580234 ZNF232Q9UNY5 417 aa16.68■□□□□ 0.26
BRD2-215ENST00000580234 RNF6Q9Y252 685 aa16.68■□□□□ 0.26
BRD2-215ENST00000580234 LOC100653049A0A140TA62 436 aa16.67■□□□□ 0.26
BRD2-215ENST00000580234 HSPB2A8KAH6 182 aa16.67■□□□□ 0.26
BRD2-215ENST00000580234 H0Y3Z8 333 aa16.67■□□□□ 0.26
BRD2-215ENST00000580234 FAAHO00519 579 aa16.67■□□□□ 0.26
BRD2-215ENST00000580234 KRT34O76011 436 aa16.67■□□□□ 0.26
BRD2-215ENST00000580234 TOXO94900 526 aa16.67■□□□□ 0.26
BRD2-215ENST00000580234 CLDN14O95500 239 aa16.67■□□□□ 0.26
BRD2-215ENST00000580234 NUDT14O95848 222 aa16.67■□□□□ 0.26
BRD2-215ENST00000580234 UBTFL6P0CB48 400 aaPredicted RBP16.67■□□□□ 0.26
BRD2-215ENST00000580234 PRKCAP17252 672 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms