RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 METTL2AQ96IZ6 378 aaKnown RBP3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 ARL5BQ96KC2 179 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 MS4A4EQ96PG1 132 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 FAM111AQ96PZ2 611 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 SDF2Q99470 211 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 PSD2Q9BQI7 771 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 MED18Q9BUE0 208 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 C1orf50Q9BV19 199 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 BTBD2Q9BX70 525 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 TRIM2Q9C040 744 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 KLHL4Q9C0H6 718 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 ACTR6Q9GZN1 396 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 TSPYL1Q9H0U9 437 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 PIGUQ9H490 435 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 C12orf49Q9H741 205 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 BCO1Q9HAY6 547 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 Q9N2J8 555 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 PFDN4Q9NQP4 134 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 NMRK1Q9NWW6 199 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 LGALS13Q9UHV8 139 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 CARD8Q9Y2G2 431 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 WBP11Q9Y2W2 641 aaKnown RBP3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 FIS1Q9Y3D6 152 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 TRAF6Q9Y4K3 522 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 MAGED1Q9Y5V3 778 aaPredicted RBP3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 ACTL7BQ9Y614 415 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 ANK2Q01484 3957 aa3.94□□□□□ -1.78
PPP4R1-209ENST00000578329 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 A0A087WZY1 265 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 E7EQL1 145 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 LINC01387J3KSC0 135 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 AP3D1O14617 1153 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 NDUFB5O43674 189 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 NPHS1O60500 1241 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 TRIM13O60858 407 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 SMPD2O60906 423 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 PEX11AO75192 247 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 PGM3O95394 542 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 BPGMP07738 259 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 ALDOCP09972 364 aaKnown RBP3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 NUDT17P0C025 328 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 HOXB9P17482 250 aaPredicted RBP3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 DDX5P17844 614 aaKnown RBP3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 IGHV1-2P23083 117 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 NTSP30990 170 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 SFTPDP35247 375 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 PGM1P36871 562 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 CDKN1AP38936 164 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 ASMTP46597 345 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 OR3A2P47893 321 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 CCT3P49368 545 aaKnown RBP3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 P2RY4P51582 365 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 PSPHP78330 225 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 IRX1P78414 480 aaPredicted RBP3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 H3F3AP84243 136 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 LGALS3BPQ08380 585 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 P2RY6Q15077 328 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 QPRTQ15274 297 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 SF3B4Q15427 424 aaKnown RBP eCLIP3.93□□□□□ -1.788e-9■■□□□ 13
PPP4R1-209ENST00000578329 ZNF141Q15928 474 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 MST1LQ2TV78 715 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 TMEM176BQ3YBM2 270 aaPredicted RBP3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 CCDC153Q494R4 210 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 GALNTL6Q49A17 601 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 ATP6AP1LQ52LC2 224 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 DCST2Q5T1A1 773 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 PDZK1Q5T2W1 519 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 SFRP5Q5T4F7 317 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 C6orf163Q5TEZ5 329 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 IL23RQ5VWK5 629 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 HBMQ6B0K9 141 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 ABLIM2Q6H8Q1 611 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 TYW3Q6IPR3 259 aaKnown RBP3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 LRIG3Q6UXM1 1119 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 FRRS1Q6ZNA5 592 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 ESPNLQ6ZVH7 1005 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 LINGO2Q7L985 606 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 MAVSQ7Z434 540 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 DTX2Q86UW9 622 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 ADGRG3Q86Y34 549 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 WFDC8Q8IUA0 241 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 IFT20Q8IY31 132 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 LILRA2Q8N149 483 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 C10orf111Q8N326 155 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 EIF1ADQ8N9N8 165 aaKnown RBP3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 WDR31Q8NA23 367 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 B4GALNT2Q8NHY0 566 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 AGR3Q8TD06 166 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 MIPOL1Q8TD10 442 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 TCP10LQ8TDR4 215 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 NANOS1Q8WY41 292 aaKnown RBP3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 AKAP1Q92667 903 aaKnown RBP eCLIP3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 HTRA1Q92743 480 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 CAVIN3Q969G5 261 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 ZBTB8AQ96BR9 441 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 PPCDCQ96CD2 204 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 MTERF3Q96E29 417 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 DNAJA3Q96EY1 480 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 APOPT1Q96IL0 206 aa3.93□□□□□ -1.78
PPP4R1-209ENST00000578329 PKNOX2Q96KN3 472 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms