RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 IL12BP29460 328 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 SLC7A1P30825 629 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 DCTP40126 519 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 ECI1P42126 302 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 HLCSP50747 726 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 SSR4P51571 173 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 EEF1A1P68104 462 aaKnown RBP7.34□□□□□ -1.24
COPS3-215ENST00000578317 KCNJ10P78508 379 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 ELF3P78545 371 aaPredicted RBP7.34□□□□□ -1.24
COPS3-215ENST00000578317 ACACAQ13085 2346 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 SNTA1Q13424 505 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 GPR68Q15743 365 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 MAPK14Q16539 360 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 LIN52Q52LA3 116 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 LRRC23Q53EV4 343 aaPredicted RBP7.34□□□□□ -1.24
COPS3-215ENST00000578317 ZNF311Q5JNZ3 666 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 ATP1A1-AS1Q5TC04 95 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 ABHD17BQ5VST6 288 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 RNF220Q5VTB9 566 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 AGAP7PQ5VUJ5 663 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 BROXQ5VW32 411 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 ZFP1Q6P2D0 407 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 IGFL2Q6UWQ7 119 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 SPATA24Q86W54 205 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 ADGRG5Q8IZF4 528 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 ZNF527Q8NB42 609 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 SLC26A7Q8TE54 656 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 CANT1Q8WVQ1 401 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 APOBEC4Q8WW27 367 aaKnown RBP7.34□□□□□ -1.24
COPS3-215ENST00000578317 HGDQ93099 445 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 EFHD2Q96C19 240 aaPredicted RBP7.34□□□□□ -1.24
COPS3-215ENST00000578317 SPACA9Q96E40 222 aaPredicted RBP7.34□□□□□ -1.24
COPS3-215ENST00000578317 AGAP4Q96P64 663 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 RNF32Q9H0A6 362 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 ARMC7Q9H6L4 198 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 CACYBPQ9HB71 228 aaKnown RBP7.34□□□□□ -1.24
COPS3-215ENST00000578317 ZBTB20Q9HC78 741 aaPredicted RBP7.34□□□□□ -1.24
COPS3-215ENST00000578317 SH2D2AQ9NP31 389 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 IL1RAPQ9NPH3 570 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.34□□□□□ -1.24
COPS3-215ENST00000578317 ARMC1Q9NVT9 282 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 RRP15Q9Y3B9 282 aaKnown RBP7.34□□□□□ -1.24
COPS3-215ENST00000578317 CHST2Q9Y4C5 530 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 DTNAQ9Y4J8 743 aa7.34□□□□□ -1.24
COPS3-215ENST00000578317 IGF2RP11717 2491 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 DHRS12A0PJE2 317 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 CDHR4A6H8M9 788 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 SERINC4A6NH21 518 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 H3BNH8 94 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 SCDO00767 359 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 AQP7O14520 342 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 TP53I11O14683 189 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 TPST1O60507 370 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 DPM1O60762 260 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 FKBP6O75344 327 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 OR6B1O95007 311 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 OXSR1O95747 527 aaPredicted RBP7.33□□□□□ -1.24
COPS3-215ENST00000578317 SEMG1P04279 462 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 FESP07332 822 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 CYP4B1P13584 511 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 HPGDP15428 266 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 ITGA3P26006 1051 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 CYB561P49447 251 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 CLK3P49761 638 aaKnown RBP7.33□□□□□ -1.24
COPS3-215ENST00000578317 RPP38P78345 283 aaKnown RBP7.33□□□□□ -1.24
COPS3-215ENST00000578317 RIPK1Q13546 671 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 FGFBP1Q14512 234 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 DEFB109BQ30KR1 87 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 GRAMD1BQ3KR37 738 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 FAM98BQ52LJ0 330 aaKnown RBP7.33□□□□□ -1.24
COPS3-215ENST00000578317 FNDC7Q5VTL7 733 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 ISLR2Q6UXK2 745 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 UNQ6494/PRO21346Q6UXR6 183 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 APOOLQ6UXV4 268 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 OLIG3Q7RTU3 272 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 PIWIL3Q7Z3Z3 882 aaKnown RBP7.33□□□□□ -1.24
COPS3-215ENST00000578317 VRK2Q86Y07 508 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 MISPQ8IVT2 679 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 PRR22Q8IZ63 422 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 TMEM156Q8N614 296 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 SIRT6Q8N6T7 355 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 SMYD1Q8NB12 490 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 POGLUT1Q8NBL1 392 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 GPR32P1Q8NGA4 272 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 PAQR8Q8TEZ7 354 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 ASB15Q8WXK1 588 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 HAS2Q92819 552 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 C7orf34Q96L11 122 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 QRSL1Q9H0R6 528 aaKnown RBP7.33□□□□□ -1.24
COPS3-215ENST00000578317 ZNF552Q9H707 407 aaPredicted RBP7.33□□□□□ -1.24
COPS3-215ENST00000578317 KLHL28Q9NXS3 571 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 CNIH4Q9P003 139 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 ABI3Q9P2A4 366 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 ANAPC2Q9UJX6 822 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 ZNF443Q9Y2A4 671 aaPredicted RBP7.33□□□□□ -1.24
COPS3-215ENST00000578317 SLC35A3Q9Y2D2 325 aa7.33□□□□□ -1.24
COPS3-215ENST00000578317 ANKRD11Q6UB99 2663 aaPredicted RBP7.33□□□□□ -1.24
COPS3-215ENST00000578317 URB1O60287 2271 aaKnown RBP7.32□□□□□ -1.24
COPS3-215ENST00000578317 H0YHG0 523 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 TAF4O00268 1085 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms