RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 NPAS1Q99742 590 aa20.85■□□□□ 0.93
LIMD2-204ENST00000578297 MRGBPQ9NV56 204 aa20.85■□□□□ 0.93
LIMD2-204ENST00000578297 SLC35A3Q9Y2D2 325 aa20.85■□□□□ 0.93
LIMD2-204ENST00000578297 GMEB1Q9Y692 573 aa20.85■□□□□ 0.93
LIMD2-204ENST00000578297 CACNA1CQ13936 2221 aa20.85■□□□□ 0.93
LIMD2-204ENST00000578297 NUDT14O95848 222 aa20.84■□□□□ 0.93
LIMD2-204ENST00000578297 PGM1P36871 562 aa20.84■□□□□ 0.93
LIMD2-204ENST00000578297 SUCLG1P53597 346 aaKnown RBP20.84■□□□□ 0.93
LIMD2-204ENST00000578297 FADDQ13158 208 aa20.84■□□□□ 0.93
LIMD2-204ENST00000578297 CBFBQ13951 182 aa20.84■□□□□ 0.93
LIMD2-204ENST00000578297 MAPK11Q15759 364 aa20.84■□□□□ 0.93
LIMD2-204ENST00000578297 NAXEQ8NCW5 288 aa20.84■□□□□ 0.93
LIMD2-204ENST00000578297 POC1BQ8TC44 478 aa20.84■□□□□ 0.93
LIMD2-204ENST00000578297 WNT2BQ93097 391 aa20.84■□□□□ 0.93
LIMD2-204ENST00000578297 RNF145Q96MT1 663 aa20.84■□□□□ 0.93
LIMD2-204ENST00000578297 RUBCNLQ9H714 662 aa20.84■□□□□ 0.93
LIMD2-204ENST00000578297 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.84■□□□□ 0.93
LIMD2-204ENST00000578297 CALML5Q9NZT1 146 aa20.84■□□□□ 0.93
LIMD2-204ENST00000578297 CLCF1Q9UBD9 225 aa20.84■□□□□ 0.93
LIMD2-204ENST00000578297 LEF1Q9UJU2 399 aaPredicted RBP20.84■□□□□ 0.93
LIMD2-204ENST00000578297 GPC6Q9Y625 555 aaPredicted RBP20.84■□□□□ 0.93
LIMD2-204ENST00000578297 KIAA1549Q9HCM3 1950 aa20.84■□□□□ 0.93
LIMD2-204ENST00000578297 TRBV5-3A0A0A0MS03 114 aa20.83■□□□□ 0.93
LIMD2-204ENST00000578297 AGAP5A6NIR3 686 aa20.83■□□□□ 0.93
LIMD2-204ENST00000578297 DNAJA2O60884 412 aa20.83■□□□□ 0.93
LIMD2-204ENST00000578297 TFPTP0C1Z6 253 aa20.83■□□□□ 0.93
LIMD2-204ENST00000578297 PPIBP23284 216 aaKnown RBP20.83■□□□□ 0.93
LIMD2-204ENST00000578297 ADH6P28332 368 aa20.83■□□□□ 0.93
LIMD2-204ENST00000578297 CLDN20P56880 219 aa20.83■□□□□ 0.93
LIMD2-204ENST00000578297 RAC1P63000 192 aa20.83■□□□□ 0.93
LIMD2-204ENST00000578297 KCNJ10P78508 379 aa20.83■□□□□ 0.93
LIMD2-204ENST00000578297 CHMP1BQ7LBR1 199 aa20.83■□□□□ 0.93
LIMD2-204ENST00000578297 LIX1LQ8IVB5 337 aa20.83■□□□□ 0.93
LIMD2-204ENST00000578297 TMCO5AQ8N6Q1 288 aa20.83■□□□□ 0.93
LIMD2-204ENST00000578297 C9orf106Q8NAJ2 232 aa20.83■□□□□ 0.93
LIMD2-204ENST00000578297 FAM71CQ8NEG0 241 aa20.83■□□□□ 0.93
LIMD2-204ENST00000578297 SLC38A5Q8WUX1 472 aa20.83■□□□□ 0.93
LIMD2-204ENST00000578297 TM9SF2Q99805 663 aa20.83■□□□□ 0.93
LIMD2-204ENST00000578297 UCK2Q9BZX2 261 aa20.83■□□□□ 0.93
LIMD2-204ENST00000578297 QRSL1Q9H0R6 528 aaKnown RBP20.83■□□□□ 0.93
LIMD2-204ENST00000578297 KCNJ16Q9NPI9 418 aa20.83■□□□□ 0.93
LIMD2-204ENST00000578297 VAPAQ9P0L0 249 aa20.83■□□□□ 0.93
LIMD2-204ENST00000578297 KLHL14Q9P2G3 628 aa20.83■□□□□ 0.93
LIMD2-204ENST00000578297 NDUFAF1Q9Y375 327 aa20.83■□□□□ 0.93
LIMD2-204ENST00000578297 FAM90A27PA6NNH2 459 aa20.82■□□□□ 0.92
LIMD2-204ENST00000578297 H0YC42 278 aa20.82■□□□□ 0.92
LIMD2-204ENST00000578297 UBTFL6P0CB48 400 aaPredicted RBP20.82■□□□□ 0.92
LIMD2-204ENST00000578297 BMP2P12643 396 aa20.82■□□□□ 0.92
LIMD2-204ENST00000578297 RPS4Y1P22090 263 aaKnown RBP20.82■□□□□ 0.92
LIMD2-204ENST00000578297 CRISP3P54108 245 aa20.82■□□□□ 0.92
LIMD2-204ENST00000578297 TPD52P55327 224 aaPredicted RBP20.82■□□□□ 0.92
LIMD2-204ENST00000578297 GNA13Q14344 377 aa20.82■□□□□ 0.92
LIMD2-204ENST00000578297 TOMM34Q15785 309 aaPredicted RBP20.82■□□□□ 0.92
LIMD2-204ENST00000578297 DLEU7Q6UYE1 221 aa20.82■□□□□ 0.92
LIMD2-204ENST00000578297 GGNQ86UU5 652 aa20.82■□□□□ 0.92
LIMD2-204ENST00000578297 CMIPQ8IY22 773 aa20.82■□□□□ 0.92
LIMD2-204ENST00000578297 METTL25Q8N6Q8 603 aa20.82■□□□□ 0.92
LIMD2-204ENST00000578297 SMPDL3BQ92485 455 aa20.82■□□□□ 0.92
LIMD2-204ENST00000578297 ZFP3Q96NJ6 502 aa20.82■□□□□ 0.92
LIMD2-204ENST00000578297 ZNF629Q9UEG4 869 aaPredicted RBP20.82■□□□□ 0.92
LIMD2-204ENST00000578297 HEATR5AQ86XA9 2040 aa20.82■□□□□ 0.92
LIMD2-204ENST00000578297 ADGRG4Q8IZF6 3080 aa20.81■□□□□ 0.92
LIMD2-204ENST00000578297 DSPPQ9NZW4 1301 aa20.81■□□□□ 0.92
LIMD2-204ENST00000578297 NKX2-6A6NCS4 301 aa20.81■□□□□ 0.92
LIMD2-204ENST00000578297 TMEM247A6NEH6 219 aa20.81■□□□□ 0.92
LIMD2-204ENST00000578297 C19orf84I3L1E1 186 aa20.81■□□□□ 0.92
LIMD2-204ENST00000578297 ETV2O00321 342 aaPredicted RBP20.81■□□□□ 0.92
LIMD2-204ENST00000578297 SEC14L5O43304 696 aa20.81■□□□□ 0.92
LIMD2-204ENST00000578297 CYP7B1O75881 506 aa20.81■□□□□ 0.92
LIMD2-204ENST00000578297 RCBTB2O95199 551 aa20.81■□□□□ 0.92
LIMD2-204ENST00000578297 BCHEP06276 602 aa20.81■□□□□ 0.92
LIMD2-204ENST00000578297 SNRPB2P08579 225 aaKnown RBP20.81■□□□□ 0.92
LIMD2-204ENST00000578297 PRKCAP17252 672 aa20.81■□□□□ 0.92
LIMD2-204ENST00000578297 ELK4P28324 431 aa20.81■□□□□ 0.92
LIMD2-204ENST00000578297 ZNF136P52737 540 aa20.81■□□□□ 0.92
LIMD2-204ENST00000578297 RPS3AP61247 264 aaKnown RBP20.81■□□□□ 0.92
LIMD2-204ENST00000578297 TFF3Q07654 80 aa20.81■□□□□ 0.92
LIMD2-204ENST00000578297 SF3A3Q12874 501 aaKnown RBP eCLIP20.81■□□□□ 0.92
LIMD2-204ENST00000578297 FOXF1Q12946 379 aa20.81■□□□□ 0.92
LIMD2-204ENST00000578297 SLC25A35Q3KQZ1 300 aa20.81■□□□□ 0.92
LIMD2-204ENST00000578297 SLC25A53Q5H9E4 307 aa20.81■□□□□ 0.92
LIMD2-204ENST00000578297 ZNF787Q6DD87 383 aa20.81■□□□□ 0.92
LIMD2-204ENST00000578297 HMGN2P46Q86SG4 172 aa20.81■□□□□ 0.92
LIMD2-204ENST00000578297 DPP10Q8N608 796 aa20.81■□□□□ 0.92
LIMD2-204ENST00000578297 FBXO27Q8NI29 283 aa20.81■□□□□ 0.92
LIMD2-204ENST00000578297 MRGPRX4Q96LA9 322 aa20.81■□□□□ 0.92
LIMD2-204ENST00000578297 THUMPD3Q9BV44 507 aaKnown RBP20.81■□□□□ 0.92
LIMD2-204ENST00000578297 A4GALTQ9NPC4 353 aa20.81■□□□□ 0.92
LIMD2-204ENST00000578297 EXOSC3Q9NQT5 275 aaKnown RBP20.81■□□□□ 0.92
LIMD2-204ENST00000578297 DOCK7Q96N67 2140 aa20.81■□□□□ 0.92
LIMD2-204ENST00000578297 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.8■□□□□ 0.92
LIMD2-204ENST00000578297 ANGPT2O15123 496 aa20.8■□□□□ 0.92
LIMD2-204ENST00000578297 BCAS1O75363 584 aaPredicted RBP20.8■□□□□ 0.92
LIMD2-204ENST00000578297 NTN1O95631 604 aa20.8■□□□□ 0.92
LIMD2-204ENST00000578297 DBIP07108 87 aaKnown RBP20.8■□□□□ 0.92
LIMD2-204ENST00000578297 IL7RP16871 459 aa20.8■□□□□ 0.92
LIMD2-204ENST00000578297 ME2P23368 584 aa20.8■□□□□ 0.92
LIMD2-204ENST00000578297 CTSSP25774 331 aa20.8■□□□□ 0.92
LIMD2-204ENST00000578297 CCR4P51679 360 aa20.8■□□□□ 0.92
LIMD2-204ENST00000578297 QPRTQ15274 297 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms