RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 COX5AP20674 150 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 ENPP1P22413 925 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 CD40P25942 277 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 GPC1P35052 558 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 MAP3K8P41279 467 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 NR4A2P43354 598 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 MAGEA12P43365 314 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 SERPINB9P50453 376 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 PKNOX1P55347 436 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 SUMO3P55854 103 aaPredicted RBP7.94□□□□□ -1.14
SMG6-218ENST00000575454 MRPS25P82663 173 aaKnown RBP7.94□□□□□ -1.14
SMG6-218ENST00000575454 BTKQ06187 659 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 RASGEF1BQ0VAM2 473 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 FOXF1Q12946 379 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 LCP2Q13094 533 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 GGTLC2Q14390 218 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 OR7E24Q6IFN5 339 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 FAM71E1Q6IPT2 247 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 ZCCHC12Q6PEW1 402 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 RPS27LQ71UM5 84 aaKnown RBP7.94□□□□□ -1.14
SMG6-218ENST00000575454 MEX3DQ86XN8 651 aaKnown RBP7.94□□□□□ -1.14
SMG6-218ENST00000575454 GATSQ8NAP1 163 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 ZNF527Q8NB42 609 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 CDC26Q8NHZ8 85 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 FBXO27Q8NI29 283 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.94□□□□□ -1.14
SMG6-218ENST00000575454 FBXO25Q8TCJ0 367 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 ZFP90Q8TF47 636 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 MSI2Q96DH6 328 aaKnown RBP7.94□□□□□ -1.14
SMG6-218ENST00000575454 ZMYND19Q96E35 227 aaPredicted RBP7.94□□□□□ -1.14
SMG6-218ENST00000575454 NPAS1Q99742 590 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 PSD2Q9BQI7 771 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 EQTNQ9NQ60 294 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 NPAP1Q9NZP6 1156 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 EMC3Q9P0I2 261 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 NOTCH1P46531 2555 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 EML6Q6ZMW3 1958 aa7.93□□□□□ -1.14
SMG6-218ENST00000575454 NBEAL2Q6ZNJ1 2754 aa7.93□□□□□ -1.14
SMG6-218ENST00000575454 CCT8L1PA6NM43 557 aa7.93□□□□□ -1.14
SMG6-218ENST00000575454 RAD51CO43502 376 aa7.93□□□□□ -1.14
SMG6-218ENST00000575454 CYTIPO60759 359 aa7.93□□□□□ -1.14
SMG6-218ENST00000575454 NUDT14O95848 222 aa7.93□□□□□ -1.14
SMG6-218ENST00000575454 TGFAP01135 160 aa7.93□□□□□ -1.14
SMG6-218ENST00000575454 ALOX5P09917 674 aa7.93□□□□□ -1.14
SMG6-218ENST00000575454 IGHV1-2P23083 117 aa7.93□□□□□ -1.14
SMG6-218ENST00000575454 APOBEC3AP31941 199 aaPredicted RBP7.93□□□□□ -1.14
SMG6-218ENST00000575454 PRIM2P49643 509 aa7.93□□□□□ -1.14
SMG6-218ENST00000575454 PRKAG1P54619 331 aa7.93□□□□□ -1.14
SMG6-218ENST00000575454 SRSF2Q01130 221 aaKnown RBP7.93□□□□□ -1.14
SMG6-218ENST00000575454 SELENBP1Q13228 472 aa7.93□□□□□ -1.14
SMG6-218ENST00000575454 IMPG1Q17R60 797 aa7.93□□□□□ -1.14
SMG6-218ENST00000575454 ZNF678Q5SXM1 525 aa7.93□□□□□ -1.14
SMG6-218ENST00000575454 FBXW9Q5XUX1 488 aa7.93□□□□□ -1.14
SMG6-218ENST00000575454 UBE2J2Q8N2K1 259 aa7.93□□□□□ -1.14
SMG6-218ENST00000575454 ZNF433Q8N7K0 673 aaPredicted RBP7.93□□□□□ -1.14
SMG6-218ENST00000575454 SPATA4Q8NEY3 305 aa7.93□□□□□ -1.14
SMG6-218ENST00000575454 ZFP28Q8NHY6 868 aa7.93□□□□□ -1.14
SMG6-218ENST00000575454 ZFAND2BQ8WV99 257 aa7.93□□□□□ -1.14
SMG6-218ENST00000575454 HTRA1Q92743 480 aa7.93□□□□□ -1.14
SMG6-218ENST00000575454 ZNF764Q96H86 408 aaPredicted RBP7.93□□□□□ -1.14
SMG6-218ENST00000575454 METTL2AQ96IZ6 378 aaKnown RBP7.93□□□□□ -1.14
SMG6-218ENST00000575454 MRGPRX4Q96LA9 322 aa7.93□□□□□ -1.14
SMG6-218ENST00000575454 MS4A4EQ96PG1 132 aa7.93□□□□□ -1.14
SMG6-218ENST00000575454 TRMOQ9BU70 441 aa7.93□□□□□ -1.14
SMG6-218ENST00000575454 PLA2G12AQ9BZM1 189 aa7.93□□□□□ -1.14
SMG6-218ENST00000575454 C12orf65Q9H3J6 166 aaKnown RBP7.93□□□□□ -1.14
SMG6-218ENST00000575454 ACSS3Q9H6R3 686 aa7.93□□□□□ -1.14
SMG6-218ENST00000575454 CXorf36Q9H7Y0 433 aa7.93□□□□□ -1.14
SMG6-218ENST00000575454 EML4Q9HC35 981 aaKnown RBP7.93□□□□□ -1.14
SMG6-218ENST00000575454 NTMQ9P121 344 aa7.93□□□□□ -1.14
SMG6-218ENST00000575454 PRSS50Q9UI38 385 aa7.93□□□□□ -1.14
SMG6-218ENST00000575454 RAI1Q7Z5J4 1906 aaPredicted RBP7.93□□□□□ -1.14
SMG6-218ENST00000575454 A0A0A6YYJ9 748 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 LOC390937A0A1W2PQ73 354 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 ESYT3A0FGR9 886 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 SLC35F4A4IF30 521 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 VWC2LB2RUY7 222 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 SLCO1B7G3V0H7 640 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 H3BQF6 201 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 M0R1B8 84 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 GTPBP1O00178 669 aaKnown RBP7.92□□□□□ -1.14
SMG6-218ENST00000575454 PDPK1O15530 556 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 DDX5P17844 614 aaKnown RBP7.92□□□□□ -1.14
SMG6-218ENST00000575454 IMPDH1P20839 514 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 ATP6V1C1P21283 382 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 PCMT1P22061 227 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 SHC1P29353 583 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 SRP14P37108 136 aaKnown RBP7.92□□□□□ -1.14
SMG6-218ENST00000575454 ZNF83P51522 516 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 P2RX1P51575 399 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 CSNK2A1P68400 391 aaPredicted RBP7.92□□□□□ -1.14
SMG6-218ENST00000575454 ZNF117Q03924 483 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 CHRNEQ04844 493 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 HSPB3Q12988 150 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 SCGB2A2Q13296 93 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 PDK3Q15120 406 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 PRSS53Q2L4Q9 553 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 IQCCQ4KMZ1 466 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 UNC50Q53HI1 259 aa7.92□□□□□ -1.14
SMG6-218ENST00000575454 TEX35Q5T0J7 233 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms