RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 SLC6A8P48029 635 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 GFRA1P56159 465 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 EEFSECP57772 596 aaKnown RBP11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 SCARB2Q14108 478 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 CAPRIN1Q14444 709 aaKnown RBP11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 MAPK14Q16539 360 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 INTS11Q5TA45 600 aaKnown RBP11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 ARSKQ6UWY0 536 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 CHMP1BQ7LBR1 199 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 ZNF440Q8IYI8 595 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 CCDC197Q8NCU1 140 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 HIPK4Q8NE63 616 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 BHLHE22Q8NFJ8 381 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 NFKBIDQ8NI38 313 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 PHF10Q8WUB8 498 aaKnown RBP11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 TMEM234Q8WY98 164 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 MAL2Q969L2 176 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 RCN3Q96D15 328 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 ZG16BQ96DA0 208 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 ARSGQ96EG1 525 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 HOPXQ9BPY8 73 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 PRDM14Q9GZV8 571 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 QRSL1Q9H0R6 528 aaKnown RBP11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 IKZF5Q9H5V7 419 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 KAT8Q9H7Z6 458 aaKnown RBP11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 EXOSC3Q9NQT5 275 aaKnown RBP11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 PNPLA3Q9NST1 481 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 MED17Q9NVC6 651 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 KCNE5Q9UJ90 142 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 PRDM4Q9UKN5 801 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 ICAM5Q9UMF0 924 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 MEMO1Q9Y316 297 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 GPC6Q9Y625 555 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 DSPPQ9NZW4 1301 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 C7orf72A4D263 438 aa11.56□□□□□ -0.56
TRAPPC1-206ENST00000573989 AIM2O14862 343 aa11.56□□□□□ -0.56
TRAPPC1-206ENST00000573989 SERPINB7O75635 380 aa11.56□□□□□ -0.56
TRAPPC1-206ENST00000573989 PGM3O95394 542 aa11.56□□□□□ -0.56
TRAPPC1-206ENST00000573989 THBS1P07996 1170 aa11.56□□□□□ -0.56
TRAPPC1-206ENST00000573989 CPN1P15169 458 aa11.56□□□□□ -0.56
TRAPPC1-206ENST00000573989 POU3F2P20265 443 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC1-206ENST00000573989 PGM1P36871 562 aa11.56□□□□□ -0.56
TRAPPC1-206ENST00000573989 RNF144AP50876 292 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC1-206ENST00000573989 SMSP52788 366 aa11.56□□□□□ -0.56
TRAPPC1-206ENST00000573989 SKP2Q13309 424 aa11.56□□□□□ -0.56
TRAPPC1-206ENST00000573989 BCL2A1Q16548 175 aa11.56□□□□□ -0.56
TRAPPC1-206ENST00000573989 PLPPR5Q32ZL2 321 aa11.56□□□□□ -0.56
TRAPPC1-206ENST00000573989 ZNF311Q5JNZ3 666 aa11.56□□□□□ -0.56
TRAPPC1-206ENST00000573989 RPS26P11Q5JNZ5 115 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC1-206ENST00000573989 MRPL2Q5T653 305 aaKnown RBP11.56□□□□□ -0.56
TRAPPC1-206ENST00000573989 RNF220Q5VTB9 566 aa11.56□□□□□ -0.56
TRAPPC1-206ENST00000573989 CBLN3Q6UW01 205 aa11.56□□□□□ -0.56
TRAPPC1-206ENST00000573989 B3GNT6Q6ZMB0 384 aa11.56□□□□□ -0.56
TRAPPC1-206ENST00000573989 GTPBP8Q8N3Z3 284 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC1-206ENST00000573989 MEIOBQ8N635 442 aa11.56□□□□□ -0.56
TRAPPC1-206ENST00000573989 OR10A6Q8NH74 314 aa11.56□□□□□ -0.56
TRAPPC1-206ENST00000573989 ZNF563Q8TA94 476 aa11.56□□□□□ -0.56
TRAPPC1-206ENST00000573989 GPR119Q8TDV5 335 aa11.56□□□□□ -0.56
TRAPPC1-206ENST00000573989 SSC4DQ8WTU2 575 aa11.56□□□□□ -0.56
TRAPPC1-206ENST00000573989 ST8SIA1Q92185 356 aa11.56□□□□□ -0.56
TRAPPC1-206ENST00000573989 MED12Q93074 2177 aa11.56□□□□□ -0.56
TRAPPC1-206ENST00000573989 TNFRSF10DQ9UBN6 386 aa11.56□□□□□ -0.56
TRAPPC1-206ENST00000573989 ERRFI1Q9UJM3 462 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC1-206ENST00000573989 HRH3Q9Y5N1 445 aa11.56□□□□□ -0.56
TRAPPC1-206ENST00000573989 AP4B1Q9Y6B7 739 aa11.56□□□□□ -0.56
TRAPPC1-206ENST00000573989 RELNP78509 3460 aa11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 CENPVL1A0A0U1RR11 272 aa11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 OR2M5A3KFT3 312 aa11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 PRORSD1PA6NEY8 169 aa11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 B4DXG7 233 aa11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 H0Y3Z8 333 aa11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 H3BML4 177 aa11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 SEMA7AO75326 666 aa11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 LINGO3P0C6S8 592 aa11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 PABPC4LP0CB38 370 aaKnown RBP11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 ELK4P28324 431 aa11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 NUDT2P50583 147 aa11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 MNAT1P51948 309 aa11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 RPS3AP61247 264 aaKnown RBP11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 SRYQ05066 204 aa11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 SELPLGQ14242 412 aa11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 MAPK11Q15759 364 aa11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 EMC4Q5J8M3 183 aa11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 C1orf185Q5T7R7 199 aa11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 ERICH5Q6P6B1 374 aa11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 RPTNQ6XPR3 784 aa11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 HACD2Q6Y1H2 254 aa11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 ZNF550Q7Z398 422 aa11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 NET1Q7Z628 596 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 HMGN2P46Q86SG4 172 aa11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 TREML1Q86YW5 311 aa11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 ULK2Q8IYT8 1036 aa11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 FAM71CQ8NEG0 241 aa11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 WDYHV1Q96HA8 205 aa11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 MRGPRX4Q96LA9 322 aa11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 SLC39A3Q9BRY0 314 aa11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 COQ3Q9NZJ6 369 aa11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 SLC13A4Q9UKG4 626 aa11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 ZNF443Q9Y2A4 671 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 ZNF337Q9Y3M9 751 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms