RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 TMEM45AQ9NWC5 275 aa7.04□□□□□ -1.28
SMG6-211ENST00000572369 THUMPD1Q9NXG2 353 aaKnown RBP7.04□□□□□ -1.28
SMG6-211ENST00000572369 CALML5Q9NZT1 146 aa7.04□□□□□ -1.28
SMG6-211ENST00000572369 P2RX2Q9UBL9 471 aa7.04□□□□□ -1.28
SMG6-211ENST00000572369 RNF6Q9Y252 685 aa7.04□□□□□ -1.28
SMG6-211ENST00000572369 NDUFAF1Q9Y375 327 aa7.04□□□□□ -1.28
SMG6-211ENST00000572369 ZNF337Q9Y3M9 751 aa7.04□□□□□ -1.28
SMG6-211ENST00000572369 PCDHB14Q9Y5E9 798 aa7.04□□□□□ -1.28
SMG6-211ENST00000572369 FAM215AQ9Y5M1 114 aa7.04□□□□□ -1.28
SMG6-211ENST00000572369 NCOA6Q14686 2063 aaPredicted RBP7.04□□□□□ -1.28
SMG6-211ENST00000572369 A0A096LPI6 279 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 IGLV3-32A0A0A0MS00 114 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 A0A1W2PP18 115 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 HSPB2A8KAH6 182 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 SHISA8B8ZZ34 492 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 DYNC1I1O14576 645 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 EIF1AYO14602 144 aaKnown RBP7.03□□□□□ -1.28
SMG6-211ENST00000572369 KIAA0513O60268 411 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 EIF4E2O60573 245 aaKnown RBP7.03□□□□□ -1.28
SMG6-211ENST00000572369 UGT2B17O75795 530 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 EPPINO95925 133 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 C1QCP02747 245 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 SNRPB2P08579 225 aaKnown RBP7.03□□□□□ -1.28
SMG6-211ENST00000572369 UBTFL6P0CB48 400 aaPredicted RBP7.03□□□□□ -1.28
SMG6-211ENST00000572369 CPN1P15169 458 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 CAPN3P20807 821 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 LHX2P50458 406 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 CRISP3P54108 245 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 RPS3AP61247 264 aaKnown RBP7.03□□□□□ -1.28
SMG6-211ENST00000572369 CHRNEQ04844 493 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 ART3Q13508 389 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 CBFBQ13951 182 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 NFYCQ13952 458 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 RGNQ15493 299 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 ZNF141Q15928 474 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 HSPB2Q16082 182 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 ACSF3Q4G176 576 aaPredicted RBP7.03□□□□□ -1.28
SMG6-211ENST00000572369 PDSS1Q5T2R2 415 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 RIPPLY2Q5TAB7 128 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 NSUN5P2Q63ZY6 315 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 RTL6Q6ICC9 239 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 TYW3Q6IPR3 259 aaKnown RBP7.03□□□□□ -1.28
SMG6-211ENST00000572369 CBLN3Q6UW01 205 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 FRRS1Q6ZNA5 592 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 LRRC74BQ6ZQY2 392 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 EIF3MQ7L2H7 374 aaKnown RBP7.03□□□□□ -1.28
SMG6-211ENST00000572369 GRAMD2AQ8IUY3 354 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 PEX5LQ8IYB4 626 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 ANKFN1Q8N957 763 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 ATP6V1C2Q8NEY4 427 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 ZNF563Q8TA94 476 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 ZPLD1Q8TCW7 415 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 WDR60Q8WVS4 1066 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 RNF145Q96MT1 663 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 TUBA1CQ9BQE3 449 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 THUMPD3Q9BV44 507 aaKnown RBP7.03□□□□□ -1.28
SMG6-211ENST00000572369 PRRG4Q9BZD6 226 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 ZNF350Q9GZX5 532 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 PAIP1Q9H074 479 aaKnown RBP7.03□□□□□ -1.28
SMG6-211ENST00000572369 FAM107BQ9H098 131 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 NSRP1Q9H0G5 558 aaKnown RBP7.03□□□□□ -1.28
SMG6-211ENST00000572369 CCDC134Q9H6E4 229 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 MTHFD2LQ9H903 347 aaPredicted RBP7.03□□□□□ -1.28
SMG6-211ENST00000572369 CHST11Q9NPF2 352 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 KCNJ16Q9NPI9 418 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 SLC6A13Q9NSD5 602 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 MED17Q9NVC6 651 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 LEF1Q9UJU2 399 aaPredicted RBP7.03□□□□□ -1.28
SMG6-211ENST00000572369 ZNF232Q9UNY5 417 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 CORO2BQ9UQ03 480 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 SLC35A3Q9Y2D2 325 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 AP4B1Q9Y6B7 739 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 POLEQ07864 2286 aa7.03□□□□□ -1.28
SMG6-211ENST00000572369 A0A0G2JNJ9 132 aa7.02□□□□□ -1.29
SMG6-211ENST00000572369 NKX2-6A6NCS4 301 aa7.02□□□□□ -1.29
SMG6-211ENST00000572369 CLCA1A8K7I4 914 aa7.02□□□□□ -1.29
SMG6-211ENST00000572369 B4DXG7 233 aa7.02□□□□□ -1.29
SMG6-211ENST00000572369 NPIPB9F8W1W9 429 aa7.02□□□□□ -1.29
SMG6-211ENST00000572369 DVL2O14641 736 aa7.02□□□□□ -1.29
SMG6-211ENST00000572369 OPN1LWP04000 364 aa7.02□□□□□ -1.29
SMG6-211ENST00000572369 DBIP07108 87 aaKnown RBP7.02□□□□□ -1.29
SMG6-211ENST00000572369 CHRM4P08173 479 aa7.02□□□□□ -1.29
SMG6-211ENST00000572369 UQCRBP14927 111 aa7.02□□□□□ -1.29
SMG6-211ENST00000572369 ZNF708P17019 499 aa7.02□□□□□ -1.29
SMG6-211ENST00000572369 ZNF17P17021 662 aa7.02□□□□□ -1.29
SMG6-211ENST00000572369 PGCP20142 388 aa7.02□□□□□ -1.29
SMG6-211ENST00000572369 RYKP34925 604 aa7.02□□□□□ -1.29
SMG6-211ENST00000572369 SFTPDP35247 375 aa7.02□□□□□ -1.29
SMG6-211ENST00000572369 EIF1P41567 113 aaKnown RBP7.02□□□□□ -1.29
SMG6-211ENST00000572369 MAGEA8P43361 318 aa7.02□□□□□ -1.29
SMG6-211ENST00000572369 EIF1AXP47813 144 aaKnown RBP7.02□□□□□ -1.29
SMG6-211ENST00000572369 ART1P52961 327 aa7.02□□□□□ -1.29
SMG6-211ENST00000572369 SUMO3P55854 103 aaPredicted RBP7.02□□□□□ -1.29
SMG6-211ENST00000572369 CLDN15P56746 228 aa7.02□□□□□ -1.29
SMG6-211ENST00000572369 CLDN18P56856 261 aa7.02□□□□□ -1.29
SMG6-211ENST00000572369 B3GALT5-AS1P59052 145 aa7.02□□□□□ -1.29
SMG6-211ENST00000572369 KCNJ10P78508 379 aa7.02□□□□□ -1.29
SMG6-211ENST00000572369 FUT5Q11128 374 aa7.02□□□□□ -1.29
SMG6-211ENST00000572369 FOXF1Q12946 379 aa7.02□□□□□ -1.29
SMG6-211ENST00000572369 FADDQ13158 208 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms