RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 CDCP1Q9H5V8 836 aa12.54□□□□□ -0.4
RPAIN-209ENST00000571558 MRTO4Q9UKD2 239 aaKnown RBP12.54□□□□□ -0.4
RPAIN-209ENST00000571558 NPIPA5E9PKD4 350 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 ADAM10O14672 748 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 UGT2B11O75310 529 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 ENTPD5O75356 428 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 REM1O75628 298 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 SERPINB7O75635 380 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 UTS2O95399 124 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 OPN1SWP03999 348 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 THBS1P07996 1170 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 NGFRP08138 427 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 PABPC4LP0CB38 370 aaKnown RBP12.53□□□□□ -0.4
RPAIN-209ENST00000571558 ATP6V1C1P21283 382 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 RFX3P48380 749 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 KCNJ5P48544 419 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 ERFP50548 548 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 ATP12AP54707 1039 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 PSMD4P55036 377 aaKnown RBP12.53□□□□□ -0.4
RPAIN-209ENST00000571558 SELENOWP63302 87 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 PLAURQ03405 335 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 TUBA3CQ13748 450 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 MEP1AQ16819 746 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 DUSP7Q16829 419 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 TUBA3EQ6PEY2 450 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 HMGN2P46Q86SG4 172 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 COMTD1Q86VU5 262 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 ARMC8Q8IUR7 673 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 ADGRG5Q8IZF4 528 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 OIT3Q8WWZ8 545 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 HGDQ93099 445 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 DUS3LQ96G46 650 aaKnown RBP12.53□□□□□ -0.4
RPAIN-209ENST00000571558 LRGUKQ96M69 825 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 ZNF559Q9BR84 538 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 SPATA5L1Q9BVQ7 753 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 FLRT3Q9NZU0 649 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 NPIPA1Q9UND3 350 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 CHST2Q9Y4C5 530 aa12.53□□□□□ -0.4
RPAIN-209ENST00000571558 NPIPA5A0A0B4J1W7 369 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 NPIPA7E9PJI5 369 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 TPST1O60507 370 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 PRKD3O94806 890 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 OR6B1O95007 311 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 STAMBPO95630 424 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 EPPINO95925 133 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 IFNA14P01570 189 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 SEMG1P04279 462 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 DBIP07108 87 aaKnown RBP12.52□□□□□ -0.41
RPAIN-209ENST00000571558 NPIPA8P0DM63 369 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 TBXA2RP21731 343 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 IL12BP29460 328 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 KRT20P35900 424 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 CD96P40200 585 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 SOX3P41225 446 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 SSR4P51571 173 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 FBXW4P57775 412 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 EEF1A1P68104 462 aaKnown RBP12.52□□□□□ -0.41
RPAIN-209ENST00000571558 OR1C1Q15619 314 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 NTRK2Q16620 822 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 GRAMD1BQ3KR37 738 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 GLIPR1L2Q4G1C9 344 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 KLHL26Q53HC5 615 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 TMEM211Q6ICI0 200 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 DHRS4L2Q6PKH6 230 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 ENPP6Q6UWR7 440 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 APOOLQ6UXV4 268 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 SPATA24Q86W54 205 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 VRK2Q86Y07 508 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 DMRTC2Q8IXT2 367 aaPredicted RBP12.52□□□□□ -0.41
RPAIN-209ENST00000571558 OR10Q1Q8NGQ4 319 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 OR52P1PQ8NH57 321 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 LILRB4Q8NHJ6 448 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 SPPL2AQ8TCT8 520 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 SLCO4A1Q96BD0 722 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 UBQLN4Q9NRR5 601 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 RPS6KA6Q9UK32 745 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 EDARQ9UNE0 448 aa12.52□□□□□ -0.41
RPAIN-209ENST00000571558 SAMD4AQ9UPU9 718 aaKnown RBP12.52□□□□□ -0.41
RPAIN-209ENST00000571558 ZNF443Q9Y2A4 671 aaPredicted RBP12.52□□□□□ -0.41
RPAIN-209ENST00000571558 DHRS12A0PJE2 317 aa12.51□□□□□ -0.41
RPAIN-209ENST00000571558 PRAMEF25A6NGN4 478 aa12.51□□□□□ -0.41
RPAIN-209ENST00000571558 FADS1O60427 444 aa12.51□□□□□ -0.41
RPAIN-209ENST00000571558 ICOSLGO75144 302 aa12.51□□□□□ -0.41
RPAIN-209ENST00000571558 ZNF682O95780 498 aa12.51□□□□□ -0.41
RPAIN-209ENST00000571558 GPIP06744 558 aa12.51□□□□□ -0.41
RPAIN-209ENST00000571558 NID1P14543 1247 aa12.51□□□□□ -0.41
RPAIN-209ENST00000571558 KLK2P20151 261 aa12.51□□□□□ -0.41
RPAIN-209ENST00000571558 CHRNB4P30926 498 aa12.51□□□□□ -0.41
RPAIN-209ENST00000571558 PRKAR1BP31321 381 aa12.51□□□□□ -0.41
RPAIN-209ENST00000571558 TMED10P49755 219 aaKnown RBP12.51□□□□□ -0.41
RPAIN-209ENST00000571558 IST1P53990 364 aa12.51□□□□□ -0.41
RPAIN-209ENST00000571558 EFR3AQ14156 821 aa12.51□□□□□ -0.41
RPAIN-209ENST00000571558 PDZK1Q5T2W1 519 aa12.51□□□□□ -0.41
RPAIN-209ENST00000571558 ZNF468Q5VIY5 522 aaPredicted RBP12.51□□□□□ -0.41
RPAIN-209ENST00000571558 RNF220Q5VTB9 566 aa12.51□□□□□ -0.41
RPAIN-209ENST00000571558 FNDC7Q5VTL7 733 aa12.51□□□□□ -0.41
RPAIN-209ENST00000571558 OPN5Q6U736 354 aa12.51□□□□□ -0.41
RPAIN-209ENST00000571558 NUP54Q7Z3B4 507 aa12.51□□□□□ -0.41
RPAIN-209ENST00000571558 VTCN1Q7Z7D3 282 aa12.51□□□□□ -0.41
RPAIN-209ENST00000571558 CHERPQ8IWX8 916 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms