RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 MAGEB4O15481 346 aaPredicted RBP15.17■□□□□ 0.02
LINC00554-201ENST00000564841 RLN2P04090 185 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 MST1P26927 711 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 GDI2P50395 445 aaKnown RBP15.17■□□□□ 0.02
LINC00554-201ENST00000564841 PSMA6P60900 246 aaKnown RBP15.17■□□□□ 0.02
LINC00554-201ENST00000564841 HSD11B1LQ7Z5J1 315 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 CPXM2Q8N436 756 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 XAGE5Q8WWM1 108 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 FAIM2Q9BWQ8 316 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 SPHK2Q9NRA0 654 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 TAAR2Q9P1P5 351 aa15.17■□□□□ 0.02
LINC00554-201ENST00000564841 PLXND1Q9Y4D7 1925 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 OR6C74A6NCV1 312 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 AGAP14A8MT82 685 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 D6RAR5 112 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 CHST10O43529 356 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 TSPAN6O43657 245 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 SLC28A2O43868 658 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 C8GP07360 202 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 AHRP35869 848 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 KCNJ5P48544 419 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 ARSIQ5FYB1 569 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 SEZ6L2Q6UXD5 910 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 TMUB2Q71RG4 321 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 TMPRSS9Q7Z410 1059 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 PM20D2Q8IYS1 436 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 MORN4Q8NDC4 146 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 ACOT12Q8WYK0 555 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 ZNF354BQ96LW1 612 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 SLC6A20Q9NP91 592 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 ISYNA1Q9NPH2 558 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 PRDM9Q9NQV7 894 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 MRPS18AQ9NVS2 196 aaKnown RBP15.16■□□□□ 0.02
LINC00554-201ENST00000564841 NTNG1Q9Y2I2 539 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 KIAA1671Q9BY89 1806 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 A0A087WUU8 490 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 GFYI3L273 518 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 EPPINO95925 133 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 STATHP02808 62 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 HOXA1P49639 335 aaPredicted RBP15.16■□□□□ 0.02
LINC00554-201ENST00000564841 KLF9Q13886 244 aaPredicted RBP15.16■□□□□ 0.02
LINC00554-201ENST00000564841 C9orf50Q5SZB4 431 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 TMEM99Q8N816 258 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 SCARB1Q8WTV0 552 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 SPATA5L1Q9BVQ7 753 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 OR51I1Q9H343 314 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 NFKBIL1Q9UBC1 381 aaPredicted RBP15.16■□□□□ 0.02
LINC00554-201ENST00000564841 KLK11Q9UBX7 282 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 CA5BQ9Y2D0 317 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 PTPRSQ13332 1948 aa15.16■□□□□ 0.02
LINC00554-201ENST00000564841 SIGLEC6O43699 453 aa15.15■□□□□ 0.02
LINC00554-201ENST00000564841 REM1O75628 298 aa15.15■□□□□ 0.02
LINC00554-201ENST00000564841 LATS1O95835 1130 aa15.15■□□□□ 0.02
LINC00554-201ENST00000564841 ATP1B2P14415 290 aaPredicted RBP15.15■□□□□ 0.02
LINC00554-201ENST00000564841 ATF1P18846 271 aa15.15■□□□□ 0.02
LINC00554-201ENST00000564841 S100A11P31949 105 aa15.15■□□□□ 0.02
LINC00554-201ENST00000564841 MTNR1BP49286 362 aa15.15■□□□□ 0.02
LINC00554-201ENST00000564841 CCR8P51685 355 aa15.15■□□□□ 0.02
LINC00554-201ENST00000564841 CBLN2Q8IUK8 224 aa15.15■□□□□ 0.02
LINC00554-201ENST00000564841 LURAP1LQ8IV03 231 aa15.15■□□□□ 0.02
LINC00554-201ENST00000564841 SFTPA1Q8IWL2 248 aa15.15■□□□□ 0.02
LINC00554-201ENST00000564841 OR5M1Q8NGP8 315 aa15.15■□□□□ 0.02
LINC00554-201ENST00000564841 TREX2Q9BQ50 279 aaPredicted RBP15.15■□□□□ 0.02
LINC00554-201ENST00000564841 RIOK2Q9BVS4 552 aaKnown RBP15.15■□□□□ 0.02
LINC00554-201ENST00000564841 SEMA4CQ9C0C4 833 aa15.15■□□□□ 0.02
LINC00554-201ENST00000564841 MIEF1Q9NQG6 463 aa15.15■□□□□ 0.02
LINC00554-201ENST00000564841 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.15■□□□□ 0.02
LINC00554-201ENST00000564841 H0YIV9 168 aa15.15■□□□□ 0.02
LINC00554-201ENST00000564841 H7C2Y5 167 aa15.15■□□□□ 0.02
LINC00554-201ENST00000564841 GPR31O00270 319 aa15.15■□□□□ 0.02
LINC00554-201ENST00000564841 UBXN7O94888 489 aa15.15■□□□□ 0.02
LINC00554-201ENST00000564841 MRPL3P09001 348 aaKnown RBP15.15■□□□□ 0.02
LINC00554-201ENST00000564841 PCSK2P16519 638 aa15.15■□□□□ 0.02
LINC00554-201ENST00000564841 UGT2B7P16662 529 aa15.15■□□□□ 0.02
LINC00554-201ENST00000564841 RAB3BP20337 219 aa15.15■□□□□ 0.02
LINC00554-201ENST00000564841 MC2RQ01718 297 aa15.15■□□□□ 0.02
LINC00554-201ENST00000564841 PABPC1L2AQ5JQF8 200 aa15.15■□□□□ 0.02
LINC00554-201ENST00000564841 SLC25A30Q5SVS4 291 aa15.15■□□□□ 0.02
LINC00554-201ENST00000564841 GRHL2Q6ISB3 625 aa15.15■□□□□ 0.02
LINC00554-201ENST00000564841 PDZD9Q8IXQ8 264 aa15.15■□□□□ 0.02
LINC00554-201ENST00000564841 HDDC3Q8N4P3 179 aa15.15■□□□□ 0.02
LINC00554-201ENST00000564841 NANPQ8TBE9 248 aa15.15■□□□□ 0.02
LINC00554-201ENST00000564841 KAT2AQ92830 837 aa15.15■□□□□ 0.02
LINC00554-201ENST00000564841 TIMP4Q99727 224 aa15.15■□□□□ 0.02
LINC00554-201ENST00000564841 NPDC1Q9NQX5 325 aaPredicted RBP15.15■□□□□ 0.02
LINC00554-201ENST00000564841 STOX2Q9P2F5 926 aaPredicted RBP15.15■□□□□ 0.02
LINC00554-201ENST00000564841 PLAGL1Q9UM63 463 aa15.15■□□□□ 0.02
LINC00554-201ENST00000564841 HMGN4O00479 90 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 LEFTY1O75610 366 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 RP2O75695 350 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 GABRA1P14867 456 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 BUD31P41223 144 aaPredicted RBP15.14■□□□□ 0.01
LINC00554-201ENST00000564841 GPR4P46093 362 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 KCNJ3P48549 501 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 METAP1P53582 386 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 TPRG1Q6ZUI0 275 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 CPOQ8IVL8 374 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 MEIOBQ8N635 442 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 POGLUT1Q8NBL1 392 aa15.14■□□□□ 0.01
LINC00554-201ENST00000564841 CMSS1Q9BQ75 279 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms