RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 FABP3P05413 133 aa16.4■□□□□ 0.22
GDE1-203ENST00000564172 SPEM2Q0P670 501 aa16.4■□□□□ 0.22
GDE1-203ENST00000564172 BIKQ13323 160 aa16.4■□□□□ 0.22
GDE1-203ENST00000564172 SERTAD2Q14140 314 aa16.4■□□□□ 0.22
GDE1-203ENST00000564172 IQCCQ4KMZ1 466 aa16.4■□□□□ 0.22
GDE1-203ENST00000564172 VWA2Q5GFL6 755 aa16.4■□□□□ 0.22
GDE1-203ENST00000564172 OLIG3Q7RTU3 272 aa16.4■□□□□ 0.22
GDE1-203ENST00000564172 GPAT4Q86UL3 456 aa16.4■□□□□ 0.22
GDE1-203ENST00000564172 FAM83FQ8NEG4 500 aaPredicted RBP16.4■□□□□ 0.22
GDE1-203ENST00000564172 EDEM2Q9BV94 578 aa16.4■□□□□ 0.22
GDE1-203ENST00000564172 LIPT1Q9Y234 373 aa16.4■□□□□ 0.22
GDE1-203ENST00000564172 MMACHCQ9Y4U1 282 aa16.4■□□□□ 0.22
GDE1-203ENST00000564172 HSPE1-MOB4S4R3N1 261 aa16.4■□□□□ 0.22
GDE1-203ENST00000564172 CHRM4P08173 479 aa16.39■□□□□ 0.22
GDE1-203ENST00000564172 PCMT1P22061 227 aa16.39■□□□□ 0.22
GDE1-203ENST00000564172 PDX1P52945 283 aa16.39■□□□□ 0.22
GDE1-203ENST00000564172 ZNF404Q494X3 552 aa16.39■□□□□ 0.22
GDE1-203ENST00000564172 EXOSC6Q5RKV6 272 aaKnown RBP16.39■□□□□ 0.22
GDE1-203ENST00000564172 NXNL2Q5VZ03 156 aa16.39■□□□□ 0.22
GDE1-203ENST00000564172 TMEM236Q5W0B7 351 aa16.39■□□□□ 0.22
GDE1-203ENST00000564172 THAP5Q7Z6K1 395 aa16.39■□□□□ 0.22
GDE1-203ENST00000564172 PPP1R3BQ86XI6 285 aa16.39■□□□□ 0.22
GDE1-203ENST00000564172 AGBL5Q8NDL9 886 aa16.39■□□□□ 0.22
GDE1-203ENST00000564172 TMBIM1Q969X1 311 aa16.39■□□□□ 0.22
GDE1-203ENST00000564172 YIPF6Q96EC8 236 aa16.39■□□□□ 0.22
GDE1-203ENST00000564172 ZNF607Q96SK3 696 aa16.39■□□□□ 0.22
GDE1-203ENST00000564172 RSPO3Q9BXY4 272 aaPredicted RBP16.39■□□□□ 0.22
GDE1-203ENST00000564172 ING2Q9H160 280 aa16.39■□□□□ 0.22
GDE1-203ENST00000564172 SLC22A11Q9NSA0 550 aa16.39■□□□□ 0.22
GDE1-203ENST00000564172 GLS2Q9UI32 602 aa16.39■□□□□ 0.22
GDE1-203ENST00000564172 KLHL21Q9UJP4 597 aa16.39■□□□□ 0.22
GDE1-203ENST00000564172 ABCG2Q9UNQ0 655 aa16.39■□□□□ 0.22
GDE1-203ENST00000564172 GNGT2O14610 69 aa16.39■□□□□ 0.21
GDE1-203ENST00000564172 UGT2B17O75795 530 aa16.39■□□□□ 0.21
GDE1-203ENST00000564172 AGR2O95994 175 aa16.39■□□□□ 0.21
GDE1-203ENST00000564172 ACP2P11117 423 aa16.39■□□□□ 0.21
GDE1-203ENST00000564172 ELK4P28324 431 aa16.39■□□□□ 0.21
GDE1-203ENST00000564172 UGT2B15P54855 530 aa16.39■□□□□ 0.21
GDE1-203ENST00000564172 CD83Q01151 205 aa16.39■□□□□ 0.21
GDE1-203ENST00000564172 DUSP5Q16690 384 aa16.39■□□□□ 0.21
GDE1-203ENST00000564172 MINDY4Q4G0A6 757 aa16.39■□□□□ 0.21
GDE1-203ENST00000564172 IFI44LQ53G44 452 aa16.39■□□□□ 0.21
GDE1-203ENST00000564172 TYW3Q6IPR3 259 aaKnown RBP16.39■□□□□ 0.21
GDE1-203ENST00000564172 HEPHL1Q6MZM0 1159 aa16.39■□□□□ 0.21
GDE1-203ENST00000564172 ZCCHC12Q6PEW1 402 aa16.39■□□□□ 0.21
GDE1-203ENST00000564172 QSOX2Q6ZRP7 698 aa16.39■□□□□ 0.21
GDE1-203ENST00000564172 NAXDQ8IW45 347 aa16.39■□□□□ 0.21
GDE1-203ENST00000564172 SPPL2AQ8TCT8 520 aa16.39■□□□□ 0.21
GDE1-203ENST00000564172 RPL3LQ92901 407 aaKnown RBP16.39■□□□□ 0.21
GDE1-203ENST00000564172 COL21A1Q96P44 957 aa16.39■□□□□ 0.21
GDE1-203ENST00000564172 PIGUQ9H490 435 aa16.39■□□□□ 0.21
GDE1-203ENST00000564172 TMEM9BQ9NQ34 198 aa16.39■□□□□ 0.21
GDE1-203ENST00000564172 EXD2Q9NVH0 621 aa16.39■□□□□ 0.21
GDE1-203ENST00000564172 COQ3Q9NZJ6 369 aa16.39■□□□□ 0.21
GDE1-203ENST00000564172 COL5A1P20908 1838 aaPredicted RBP16.39■□□□□ 0.21
GDE1-203ENST00000564172 PNMA8CA0A1B0GUJ8 204 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 EFCAB7A8K855 629 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 APOC1P02654 83 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 IFI30P13284 250 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 TNFRSF1BP20333 461 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 ETV6P41212 452 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 DUSP8Q13202 625 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 ZNF267Q14586 743 aaPredicted RBP16.38■□□□□ 0.21
GDE1-203ENST00000564172 CYP27C1Q4G0S4 372 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 PRAMEF8Q5VWM4 474 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 PRAMEF7Q5VXH5 474 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 CCDC36Q8IYA8 594 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 CDRT4Q8N9R6 151 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 OR52R1Q8NGF1 315 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 OR52H1Q8NGJ2 320 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 BBS10Q8TAM1 723 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 CDS1Q92903 461 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 TMCO6Q96DC7 493 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 ZHX1-C8orf76Q96EF9 292 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 TRNT1Q96Q11 434 aaKnown RBP16.38■□□□□ 0.21
GDE1-203ENST00000564172 CCDC32Q9BV29 185 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 MKKSQ9NPJ1 570 aaPredicted RBP16.38■□□□□ 0.21
GDE1-203ENST00000564172 SEMA4GQ9NTN9 838 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 PADI2Q9Y2J8 665 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 IGKV3D-11A0A0A0MRZ8 115 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 A0A0G2JPF8 293 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 HNRNPCL2B2RXH8 293 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 HNRNPCL3B7ZW38 293 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 HRKO00198 91 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 GDF9O60383 454 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 DIRAS1O95057 198 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 HNRNPCL4P0DMR1 293 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 FGF5P12034 268 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 GALNSP34059 522 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 MAP3K8P41279 467 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 OR1E2P47887 323 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 FLI1Q01543 452 aaPredicted RBP16.38■□□□□ 0.21
GDE1-203ENST00000564172 TCF15Q12870 199 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 EFR3AQ14156 821 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 IL11RAQ14626 422 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 C4orf46Q504U0 113 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 TMEM81Q6P7N7 255 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 COX15Q7KZN9 410 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 C16orf62Q7Z3J2 963 aa16.38■□□□□ 0.21
GDE1-203ENST00000564172 TSEN54Q7Z6J9 526 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms