RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 C9orf40Q8IXQ3 194 aa8.93□□□□□ -0.98
UBFD1-202ENST00000563366 RNF113BQ8IZP6 322 aaKnown RBP8.93□□□□□ -0.98
UBFD1-202ENST00000563366 ZNF786Q8N393 782 aa8.93□□□□□ -0.98
UBFD1-202ENST00000563366 CLIP4Q8N3C7 705 aa8.93□□□□□ -0.98
UBFD1-202ENST00000563366 LSMEM1Q8N8F7 131 aa8.93□□□□□ -0.98
UBFD1-202ENST00000563366 OR4K5Q8NGD3 323 aa8.93□□□□□ -0.98
UBFD1-202ENST00000563366 OR9Q2Q8NGE9 314 aa8.93□□□□□ -0.98
UBFD1-202ENST00000563366 OR2Y1Q8NGV0 311 aa8.93□□□□□ -0.98
UBFD1-202ENST00000563366 WDR36Q8NI36 951 aaKnown RBP8.93□□□□□ -0.98
UBFD1-202ENST00000563366 PIGXQ8TBF5 258 aa8.93□□□□□ -0.98
UBFD1-202ENST00000563366 ACOT11Q8WXI4 607 aaPredicted RBP8.93□□□□□ -0.98
UBFD1-202ENST00000563366 HDAC2Q92769 488 aaKnown RBP8.93□□□□□ -0.98
UBFD1-202ENST00000563366 NACC2Q96BF6 587 aa8.93□□□□□ -0.98
UBFD1-202ENST00000563366 SLC41A3Q96GZ6 507 aa8.93□□□□□ -0.98
UBFD1-202ENST00000563366 MPP4Q96JB8 637 aa8.93□□□□□ -0.98
UBFD1-202ENST00000563366 EAF1Q96JC9 268 aaPredicted RBP8.93□□□□□ -0.98
UBFD1-202ENST00000563366 HRASLS5Q96KN8 279 aa8.93□□□□□ -0.98
UBFD1-202ENST00000563366 HS6ST2Q96MM7 605 aa8.93□□□□□ -0.98
UBFD1-202ENST00000563366 MUS81Q96NY9 551 aa8.93□□□□□ -0.98
UBFD1-202ENST00000563366 BARD1Q99728 777 aaKnown RBP8.93□□□□□ -0.98
UBFD1-202ENST00000563366 FUZQ9BT04 418 aa8.93□□□□□ -0.98
UBFD1-202ENST00000563366 RSPO3Q9BXY4 272 aaPredicted RBP8.93□□□□□ -0.98
UBFD1-202ENST00000563366 PRRG3Q9BZD7 231 aa8.93□□□□□ -0.98
UBFD1-202ENST00000563366 UCK2Q9BZX2 261 aa8.93□□□□□ -0.98
UBFD1-202ENST00000563366 NXF5Q9H1B4 397 aaKnown RBP8.93□□□□□ -0.98
UBFD1-202ENST00000563366 POLR1BQ9H9Y6 1135 aa8.93□□□□□ -0.98
UBFD1-202ENST00000563366 EXOSC3Q9NQT5 275 aaKnown RBP8.93□□□□□ -0.98
UBFD1-202ENST00000563366 RLIMQ9NVW2 624 aa8.93□□□□□ -0.98
UBFD1-202ENST00000563366 FBXO34Q9NWN3 711 aa8.93□□□□□ -0.98
UBFD1-202ENST00000563366 TUBA8Q9NY65 449 aaPredicted RBP8.93□□□□□ -0.98
UBFD1-202ENST00000563366 SELENONQ9NZV5 590 aa8.93□□□□□ -0.98
UBFD1-202ENST00000563366 NDRG4Q9ULP0 352 aaKnown RBP8.93□□□□□ -0.98
UBFD1-202ENST00000563366 EXPH5Q8NEV8 1989 aa8.93□□□□□ -0.98
UBFD1-202ENST00000563366 A0A087WXM4 84 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 LOC102723996A0A087X1L8 192 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 LOC100289279A0A1B0GTE1 492 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 HTR3EA5X5Y0 456 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 CHP2O43745 196 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 ADAM11O75078 769 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 CSO75390 466 aaKnown RBP8.92□□□□□ -0.98
UBFD1-202ENST00000563366 STK17BO94768 372 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 CLPTM1O96005 669 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 MT-CO3P00414 261 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 IGKV1D-16P01601 117 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 RAB40ALP0C0E4 278 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 UBL4AP11441 157 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 OSMP13725 252 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 NAGAP17050 411 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 TBXA2RP21731 343 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 NBL1P41271 181 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 RBM34P42696 430 aaKnown RBP8.92□□□□□ -0.98
UBFD1-202ENST00000563366 SLC6A8P48029 635 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 CLK3P49761 638 aaKnown RBP8.92□□□□□ -0.98
UBFD1-202ENST00000563366 ZNF136P52737 540 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 GABARAPL2P60520 117 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 CDC42P60953 191 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 CXCR4P61073 352 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 COPZ1P61923 177 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 TUBA4AP68366 448 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 RNF4P78317 190 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 IL5RAQ01344 420 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 TEKQ02763 1124 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 TARDBPQ13148 414 aaKnown RBP eCLIP8.92□□□□□ -0.98
UBFD1-202ENST00000563366 TRIP6Q15654 476 aaKnown RBP8.92□□□□□ -0.98
UBFD1-202ENST00000563366 EXT1Q16394 746 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 NNATQ16517 81 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 KLHL26Q53HC5 615 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 CCDC157Q569K6 752 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 FAAH2Q6GMR7 532 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 C1orf94Q6P1W5 598 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 PGBD2Q6P3X8 592 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 PODNL1Q6PEZ8 512 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 FAM198BQ6UWH4 519 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 C6orf15Q6UXA7 325 aaPredicted RBP8.92□□□□□ -0.98
UBFD1-202ENST00000563366 ZNF730Q6ZMV8 503 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 SHISA6Q6ZSJ9 500 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 HMGN2P46Q86SG4 172 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 PIP4P1Q86T03 277 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 COMTD1Q86VU5 262 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 MISPQ8IVT2 679 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 CDK20Q8IZL9 346 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 ZNF441Q8N8Z8 693 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 APCDD1LQ8NCL9 501 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 OR4N2Q8NGD1 307 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 GNPDA2Q8TDQ7 276 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 GATAD2BQ8WXI9 593 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 TEX12Q9BXU0 123 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 CCDC86Q9H6F5 360 aaKnown RBP8.92□□□□□ -0.98
UBFD1-202ENST00000563366 VCX3AQ9NNX9 186 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 MAN2C1Q9NTJ4 1040 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 RPS6KB2Q9UBS0 482 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 KCNE5Q9UJ90 142 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 PADI1Q9ULC6 663 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 TMEM5Q9Y2B1 443 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 CHST2Q9Y4C5 530 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 FRYLO94915 3013 aa8.92□□□□□ -0.98
UBFD1-202ENST00000563366 A0A087WUU8 490 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 A0A1W2PQ72 361 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 OR6C70A6NIJ9 312 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 FAM229AH3BQW9 127 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms