RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 RASSF1Q9NS23 344 aa16.57■□□□□ 0.24
COMMD4-208ENST00000563220 ENOPH1Q9UHY7 261 aa16.57■□□□□ 0.24
COMMD4-208ENST00000563220 PADI1Q9ULC6 663 aa16.57■□□□□ 0.24
COMMD4-208ENST00000563220 RNF6Q9Y252 685 aa16.57■□□□□ 0.24
COMMD4-208ENST00000563220 SLC35A3Q9Y2D2 325 aa16.57■□□□□ 0.24
COMMD4-208ENST00000563220 EP300Q09472 2414 aaPredicted RBP16.57■□□□□ 0.24
COMMD4-208ENST00000563220 A0A0B4J2E0 115 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 A0A1B0GWA3 101 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 A0A1B0GX12 115 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 DLGAP3O95886 979 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 CRHBPP24387 322 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 LCN1P31025 176 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 KRT20P35900 424 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 ALDH3B2P48448 385 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 PNLIPRP2P54317 469 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 RBM48Q5RL73 367 aaKnown RBP16.56■□□□□ 0.24
COMMD4-208ENST00000563220 C6orf15Q6UXA7 325 aaPredicted RBP16.56■□□□□ 0.24
COMMD4-208ENST00000563220 B3GNT6Q6ZMB0 384 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 GLRX5Q86SX6 157 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 LSMEM1Q8N8F7 131 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 FAM71CQ8NEG0 241 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 PIGXQ8TBF5 258 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 RNF217Q8TC41 542 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 PHOSPHO1Q8TCT1 267 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 GRHL3Q8TE85 626 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 FAM46AQ96IP4 442 aaKnown RBP16.56■□□□□ 0.24
COMMD4-208ENST00000563220 DEPDC7Q96QD5 511 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 PRRX2Q99811 253 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 CNIH4Q9P003 139 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 CFAP54Q96N23 3096 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 CCDC187A0A096LP49 1063 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 TRIM64CA6NLI5 447 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 IFNGR2P38484 337 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 NBL1P41271 181 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 C11orf91Q3C1V1 193 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 CBLN3Q6UW01 205 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 DEFB124Q8NES8 71 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 FAM81AQ8TBF8 368 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 APH1BQ8WW43 257 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 SGCDQ92629 289 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 TRIM2Q9C040 744 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 ZBTB20Q9HC78 741 aaPredicted RBP16.56■□□□□ 0.24
COMMD4-208ENST00000563220 TUBA8Q9NY65 449 aaPredicted RBP16.56■□□□□ 0.24
COMMD4-208ENST00000563220 NPFFR2Q9Y5X5 522 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 PCNX2A6NKB5 2137 aa16.56■□□□□ 0.24
COMMD4-208ENST00000563220 H3BN98 237 aa16.55■□□□□ 0.24
COMMD4-208ENST00000563220 WWP2O00308 870 aa16.55■□□□□ 0.24
COMMD4-208ENST00000563220 KLF4O43474 513 aa16.55■□□□□ 0.24
COMMD4-208ENST00000563220 WBP4O75554 376 aaKnown RBP16.55■□□□□ 0.24
COMMD4-208ENST00000563220 FMO3P31513 532 aa16.55■□□□□ 0.24
COMMD4-208ENST00000563220 IDH2P48735 452 aaKnown RBP16.55■□□□□ 0.24
COMMD4-208ENST00000563220 HLCSP50747 726 aa16.55■□□□□ 0.24
COMMD4-208ENST00000563220 NUP107P57740 925 aa16.55■□□□□ 0.24
COMMD4-208ENST00000563220 ALDH6A1Q02252 535 aaKnown RBP16.55■□□□□ 0.24
COMMD4-208ENST00000563220 TSPAN31Q12999 210 aa16.55■□□□□ 0.24
COMMD4-208ENST00000563220 KIF18BQ86Y91 864 aa16.55■□□□□ 0.24
COMMD4-208ENST00000563220 BPIFB6Q8NFQ5 453 aa16.55■□□□□ 0.24
COMMD4-208ENST00000563220 OR8K3Q8NH51 312 aa16.55■□□□□ 0.24
COMMD4-208ENST00000563220 TMEM239Q8WW34 195 aa16.55■□□□□ 0.24
COMMD4-208ENST00000563220 DSN1Q9H410 356 aa16.55■□□□□ 0.24
COMMD4-208ENST00000563220 ZNF226Q9NYT6 803 aa16.55■□□□□ 0.24
COMMD4-208ENST00000563220 FOXJ2Q9P0K8 574 aa16.55■□□□□ 0.24
COMMD4-208ENST00000563220 CARD8Q9Y2G2 431 aa16.55■□□□□ 0.24
COMMD4-208ENST00000563220 PCDHGA3Q9Y5H0 932 aa16.55■□□□□ 0.24
COMMD4-208ENST00000563220 HS3ST3B1Q9Y662 390 aa16.55■□□□□ 0.24
COMMD4-208ENST00000563220 IGHV1-45A0A0A0MS14 117 aa16.54■□□□□ 0.24
COMMD4-208ENST00000563220 SLC1A7O00341 560 aa16.54■□□□□ 0.24
COMMD4-208ENST00000563220 XPNPEP2O43895 674 aa16.54■□□□□ 0.24
COMMD4-208ENST00000563220 ANGPTL1O95841 491 aa16.54■□□□□ 0.24
COMMD4-208ENST00000563220 UBL4AP11441 157 aa16.54■□□□□ 0.24
COMMD4-208ENST00000563220 SKP2Q13309 424 aa16.54■□□□□ 0.24
COMMD4-208ENST00000563220 SMN1Q16637 294 aaKnown RBP16.54■□□□□ 0.24
COMMD4-208ENST00000563220 KIRREL2Q6UWL6 708 aa16.54■□□□□ 0.24
COMMD4-208ENST00000563220 MARCH3Q86UD3 253 aa16.54■□□□□ 0.24
COMMD4-208ENST00000563220 CADM2Q8N3J6 435 aa16.54■□□□□ 0.24
COMMD4-208ENST00000563220 PFN4Q8NHR9 129 aa16.54■□□□□ 0.24
COMMD4-208ENST00000563220 RHOXF1Q8NHV9 184 aa16.54■□□□□ 0.24
COMMD4-208ENST00000563220 KLHDC3Q9BQ90 382 aa16.54■□□□□ 0.24
COMMD4-208ENST00000563220 A0A087WXM4 84 aa16.54■□□□□ 0.24
COMMD4-208ENST00000563220 C17orf51A8MQB3 221 aa16.54■□□□□ 0.24
COMMD4-208ENST00000563220 M0R129 80 aa16.54■□□□□ 0.24
COMMD4-208ENST00000563220 GTPBP1O00178 669 aaKnown RBP16.54■□□□□ 0.24
COMMD4-208ENST00000563220 CHP2O43745 196 aa16.54■□□□□ 0.24
COMMD4-208ENST00000563220 ZFAND5O76080 213 aa16.54■□□□□ 0.24
COMMD4-208ENST00000563220 NADKO95544 446 aaPredicted RBP16.54■□□□□ 0.24
COMMD4-208ENST00000563220 COX6A1P12074 109 aa16.54■□□□□ 0.24
COMMD4-208ENST00000563220 GABRB1P18505 474 aa16.54■□□□□ 0.24
COMMD4-208ENST00000563220 TCN2P20062 427 aa16.54■□□□□ 0.24
COMMD4-208ENST00000563220 GSTM3P21266 225 aa16.54■□□□□ 0.24
COMMD4-208ENST00000563220 FOLR3P41439 243 aa16.54■□□□□ 0.24
COMMD4-208ENST00000563220 GPR4P46093 362 aa16.54■□□□□ 0.24
COMMD4-208ENST00000563220 NRG3P56975 720 aa16.54■□□□□ 0.24
COMMD4-208ENST00000563220 EIF3IQ13347 325 aaKnown RBP16.54■□□□□ 0.24
COMMD4-208ENST00000563220 C3orf38Q5JPI3 329 aa16.54■□□□□ 0.24
COMMD4-208ENST00000563220 ZNF440Q8IYI8 595 aa16.54■□□□□ 0.24
COMMD4-208ENST00000563220 RNF113BQ8IZP6 322 aaKnown RBP16.54■□□□□ 0.24
COMMD4-208ENST00000563220 POGLUT1Q8NBL1 392 aa16.54■□□□□ 0.24
COMMD4-208ENST00000563220 OR5L2Q8NGL0 311 aa16.54■□□□□ 0.24
COMMD4-208ENST00000563220 ELP5Q8TE02 316 aa16.54■□□□□ 0.24
COMMD4-208ENST00000563220 IMMP1LQ96LU5 166 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms