RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 TSPAN9O75954 239 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 SOX30O94993 753 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 IL33O95760 270 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 S100A6P06703 90 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 ENO1P06733 434 aaKnown RBP7.54□□□□□ -1.2
PALB2-202ENST00000561514 THBDP07204 575 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 NGFRP08138 427 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 ALOX5P09917 674 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 FCGR2AP12318 317 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 NID1P14543 1247 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 POU2F1P14859 743 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 PPP3CBP16298 524 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 ZNF17P17021 662 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 CTRB1P17538 263 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 TSPAN8P19075 237 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 MPIP34949 423 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 ALDH9A1P49189 494 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 PTH2RP49190 550 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 PKNOX1P55347 436 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 CLDN20P56880 219 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 B2MP61769 119 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 KRTAP1-1Q07627 177 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 ACSM2AQ08AH3 577 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 LCP2Q13094 533 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 MED21Q13503 144 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 CAPRIN1Q14444 709 aaKnown RBP7.54□□□□□ -1.2
PALB2-202ENST00000561514 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.54□□□□□ -1.2
PALB2-202ENST00000561514 PRSS53Q2L4Q9 553 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 BEX5Q5H9J7 111 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 RAET1LQ5VY80 246 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 ACSM2BQ68CK6 577 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 CTRB2Q6GPI1 263 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 OR5M10Q6IEU7 315 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 FAM71E1Q6IPT2 247 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 GPRIN3Q6ZVF9 776 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 P4HA3Q7Z4N8 544 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 LRRC34Q8IZ02 419 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 CNEP1R1Q8N9A8 125 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 OR6K3Q8NGY3 331 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 FNDC9Q8TBE3 224 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 EXOSC8Q96B26 276 aaKnown RBP7.54□□□□□ -1.2
PALB2-202ENST00000561514 L3HYPDHQ96EM0 354 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 PIK3IP1Q96FE7 263 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 APIPQ96GX9 242 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 Q96MF0 132 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 PIGQQ9BRB3 760 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 LMF2Q9BU23 707 aaKnown RBP7.54□□□□□ -1.2
PALB2-202ENST00000561514 ROPN1BQ9BZX4 212 aaPredicted RBP7.54□□□□□ -1.2
PALB2-202ENST00000561514 DSN1Q9H410 356 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 ROPN1Q9HAT0 212 aaPredicted RBP7.54□□□□□ -1.2
PALB2-202ENST00000561514 MYNNQ9NPC7 610 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 PLSCR4Q9NRQ2 329 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 GIMAP4Q9NUV9 329 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 DCAF16Q9NXF7 216 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 PPP4R1LQ9P1A2 415 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 GRID1Q9ULK0 1009 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 ZNF337Q9Y3M9 751 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 AP4B1Q9Y6B7 739 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 USF3Q68DE3 2245 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 FBN1P35555 2871 aaKnown RBP7.53□□□□□ -1.2
PALB2-202ENST00000561514 RAI1Q7Z5J4 1906 aaPredicted RBP7.53□□□□□ -1.2
PALB2-202ENST00000561514 hCG_2014768A0A024R1R8 64 aa7.53□□□□□ -1.2
PALB2-202ENST00000561514 ARPC4-TTLL3A0A0A6YYG9 625 aa7.53□□□□□ -1.2
PALB2-202ENST00000561514 GOLGA8QA0A0J9YX86 632 aa7.53□□□□□ -1.2
PALB2-202ENST00000561514 LOC105371267A0A1B0GV96 52 aa7.53□□□□□ -1.2
PALB2-202ENST00000561514 GNG14A0A1W2PPG7 69 aa7.53□□□□□ -1.2
PALB2-202ENST00000561514 GOLGA8OA6NCC3 632 aa7.53□□□□□ -1.2
PALB2-202ENST00000561514 TRIM64A6NGJ6 449 aa7.53□□□□□ -1.2
PALB2-202ENST00000561514 TRIM64BA6NI03 449 aa7.53□□□□□ -1.2
PALB2-202ENST00000561514 GOLGA8NF8WBI6 632 aa7.53□□□□□ -1.2
PALB2-202ENST00000561514 GOLGA8RI6L899 631 aa7.53□□□□□ -1.2
PALB2-202ENST00000561514 M0QX08 132 aa7.53□□□□□ -1.2
PALB2-202ENST00000561514 DLX3O60479 287 aa7.53□□□□□ -1.2
PALB2-202ENST00000561514 CCDC22O60826 627 aa7.53□□□□□ -1.2
PALB2-202ENST00000561514 FKBP6O75344 327 aa7.53□□□□□ -1.2
PALB2-202ENST00000561514 TRMUO75648 421 aaKnown RBP7.53□□□□□ -1.2
PALB2-202ENST00000561514 AQP8O94778 261 aa7.53□□□□□ -1.2
PALB2-202ENST00000561514 THBS1P07996 1170 aa7.53□□□□□ -1.2
PALB2-202ENST00000561514 ABHD2P08910 425 aa7.53□□□□□ -1.2
PALB2-202ENST00000561514 SNRPAP09012 282 aaKnown RBP7.53□□□□□ -1.2
PALB2-202ENST00000561514 OCM2P0CE71 109 aa7.53□□□□□ -1.2
PALB2-202ENST00000561514 OCMP0CE72 109 aaPredicted RBP7.53□□□□□ -1.2
PALB2-202ENST00000561514 HK1P19367 917 aa7.53□□□□□ -1.2
PALB2-202ENST00000561514 IMPDH1P20839 514 aa7.53□□□□□ -1.2
PALB2-202ENST00000561514 TBXA2RP21731 343 aa7.53□□□□□ -1.2
PALB2-202ENST00000561514 ATP5F1P24539 256 aaPredicted RBP7.53□□□□□ -1.2
PALB2-202ENST00000561514 PSMA4P25789 261 aaKnown RBP7.53□□□□□ -1.2
PALB2-202ENST00000561514 GCAP28676 217 aa7.53□□□□□ -1.2
PALB2-202ENST00000561514 CLK1P49759 484 aaKnown RBP7.53□□□□□ -1.2
PALB2-202ENST00000561514 PRKAA2P54646 552 aa7.53□□□□□ -1.2
PALB2-202ENST00000561514 NR1H2P55055 460 aa7.53□□□□□ -1.2
PALB2-202ENST00000561514 PRR5P85299 388 aa7.53□□□□□ -1.2
PALB2-202ENST00000561514 ZNF763Q0D2J5 394 aa7.53□□□□□ -1.2
PALB2-202ENST00000561514 ZNF155Q12901 538 aaPredicted RBP7.53□□□□□ -1.2
PALB2-202ENST00000561514 PON3Q15166 354 aa7.53□□□□□ -1.2
PALB2-202ENST00000561514 DECR1Q16698 335 aa7.53□□□□□ -1.2
PALB2-202ENST00000561514 RGS21Q2M5E4 152 aa7.53□□□□□ -1.2
PALB2-202ENST00000561514 CTU2Q2VPK5 515 aaKnown RBP7.53□□□□□ -1.2
PALB2-202ENST00000561514 CEP78Q5JTW2 689 aa7.53□□□□□ -1.2
PALB2-202ENST00000561514 EXOSC6Q5RKV6 272 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms