RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 GPALPP1Q8IXQ4 340 aa7.89□□□□□ -1.15
TRAF3-209ENST00000560463 HS3ST5Q8IZT8 346 aa7.89□□□□□ -1.15
TRAF3-209ENST00000560463 DHRSXQ8N5I4 330 aa7.89□□□□□ -1.15
TRAF3-209ENST00000560463 ATG16L2Q8NAA4 619 aa7.89□□□□□ -1.15
TRAF3-209ENST00000560463 OR10G2Q8NGC3 310 aa7.89□□□□□ -1.15
TRAF3-209ENST00000560463 SLC7A13Q8TCU3 470 aa7.89□□□□□ -1.15
TRAF3-209ENST00000560463 DNAJA4Q8WW22 397 aaPredicted RBP7.89□□□□□ -1.15
TRAF3-209ENST00000560463 ACOT11Q8WXI4 607 aaPredicted RBP7.89□□□□□ -1.15
TRAF3-209ENST00000560463 ASB15Q8WXK1 588 aa7.89□□□□□ -1.15
TRAF3-209ENST00000560463 THAP4Q8WY91 577 aa7.89□□□□□ -1.15
TRAF3-209ENST00000560463 NAF1Q96HR8 494 aaKnown RBP7.89□□□□□ -1.15
TRAF3-209ENST00000560463 MPP4Q96JB8 637 aa7.89□□□□□ -1.15
TRAF3-209ENST00000560463 FEVQ99581 238 aa7.89□□□□□ -1.15
TRAF3-209ENST00000560463 FUZQ9BT04 418 aa7.89□□□□□ -1.15
TRAF3-209ENST00000560463 DGCR6LQ9BY27 220 aa7.89□□□□□ -1.15
TRAF3-209ENST00000560463 CDCP1Q9H5V8 836 aa7.89□□□□□ -1.15
TRAF3-209ENST00000560463 SMURF2Q9HAU4 748 aa7.89□□□□□ -1.15
TRAF3-209ENST00000560463 KRCC1Q9NPI7 259 aaPredicted RBP7.89□□□□□ -1.15
TRAF3-209ENST00000560463 ATP13A2Q9NQ11 1180 aa7.89□□□□□ -1.15
TRAF3-209ENST00000560463 SDHAF3Q9NRP4 125 aa7.89□□□□□ -1.15
TRAF3-209ENST00000560463 MAN2C1Q9NTJ4 1040 aa7.89□□□□□ -1.15
TRAF3-209ENST00000560463 RPS6KB2Q9UBS0 482 aa7.89□□□□□ -1.15
TRAF3-209ENST00000560463 IL17BQ9UHF5 180 aa7.89□□□□□ -1.15
TRAF3-209ENST00000560463 TEKT2Q9UIF3 430 aa7.89□□□□□ -1.15
TRAF3-209ENST00000560463 TMEFF2Q9UIK5 374 aaPredicted RBP7.89□□□□□ -1.15
TRAF3-209ENST00000560463 LRCH1Q9Y2L9 728 aa7.89□□□□□ -1.15
TRAF3-209ENST00000560463 MAGED1Q9Y5V3 778 aaPredicted RBP7.89□□□□□ -1.15
TRAF3-209ENST00000560463 MRPS18BQ9Y676 258 aaKnown RBP7.89□□□□□ -1.15
TRAF3-209ENST00000560463 AP4B1Q9Y6B7 739 aa7.89□□□□□ -1.15
TRAF3-209ENST00000560463 SPTBN2O15020 2390 aa7.89□□□□□ -1.15
TRAF3-209ENST00000560463 ACACAQ13085 2346 aa7.89□□□□□ -1.15
TRAF3-209ENST00000560463 DNAJC13O75165 2243 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 A0A0B4J2E0 115 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 TRBV4-1A0A0J9YWV2 114 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 A0A1B0GX12 115 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 DCDC2BA2VCK2 349 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 HTR3EA5X5Y0 456 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 TRABD2BA6NFA1 517 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 OR10H3O60404 316 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 ZNF354AO60765 605 aaPredicted RBP7.88□□□□□ -1.15
TRAF3-209ENST00000560463 SNAP29O95721 258 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 ADAP00813 363 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 CELA2AP08217 269 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 LIFP15018 202 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 PGCP20142 388 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 GSTM3P21266 225 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 CBLP22681 906 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 HTR2AP28223 471 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 CAPGP40121 348 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 RBM34P42696 430 aaKnown RBP7.88□□□□□ -1.15
TRAF3-209ENST00000560463 P2RX1P51575 399 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 UGT2B15P54855 530 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 SOX8P57073 446 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 FBXW4P57775 412 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 ADARB1P78563 741 aaKnown RBP7.88□□□□□ -1.15
TRAF3-209ENST00000560463 ZNF117Q03924 483 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 CBFBQ13951 182 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 CD226Q15762 336 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 ZNF791Q3KP31 576 aaPredicted RBP7.88□□□□□ -1.15
TRAF3-209ENST00000560463 TBC1D25Q3MII6 688 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 SLC36A3Q495N2 470 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 DCAF10Q5QP82 559 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 ZNF770Q6IQ21 691 aaPredicted RBP7.88□□□□□ -1.15
TRAF3-209ENST00000560463 C1orf94Q6P1W5 598 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 PODNL1Q6PEZ8 512 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 C16orf47Q6ZP98 133 aaPredicted RBP7.88□□□□□ -1.15
TRAF3-209ENST00000560463 MARCH3Q86UD3 253 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 TSPYL5Q86VY4 417 aaPredicted RBP7.88□□□□□ -1.15
TRAF3-209ENST00000560463 TMEM156Q8N614 296 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 CLEC1AQ8NC01 280 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 ZNF555Q8NEP9 628 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 OR4K5Q8NGD3 323 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 TFAP2CQ92754 450 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 ARSGQ96EG1 525 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 THOC3Q96J01 351 aaKnown RBP7.88□□□□□ -1.15
TRAF3-209ENST00000560463 SGCZQ96LD1 299 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 BARD1Q99728 777 aaKnown RBP7.88□□□□□ -1.15
TRAF3-209ENST00000560463 ADI1Q9BV57 179 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 PRR14Q9BWN1 585 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 ANKRD60Q9BZ19 345 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 LHPPQ9H008 270 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 C12orf10Q9HB07 376 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 CPNE5Q9HCH3 593 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 PAPOLBQ9NRJ5 636 aaKnown RBP7.88□□□□□ -1.15
TRAF3-209ENST00000560463 FLRT3Q9NZU0 649 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 SELENONQ9NZV5 590 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 SLC7A7Q9UM01 511 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 CARD8Q9Y2G2 431 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 PIEZO1Q92508 2521 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 DCHS1Q96JQ0 3298 aa7.88□□□□□ -1.15
TRAF3-209ENST00000560463 FREM2Q5SZK8 3169 aa7.87□□□□□ -1.15
TRAF3-209ENST00000560463 ZFHX4Q86UP3 3567 aa7.87□□□□□ -1.15
TRAF3-209ENST00000560463 A0A087WUU8 490 aa7.87□□□□□ -1.15
TRAF3-209ENST00000560463 IGLV3-32A0A0A0MS00 114 aa7.87□□□□□ -1.15
TRAF3-209ENST00000560463 A0A1B0GWA3 101 aa7.87□□□□□ -1.15
TRAF3-209ENST00000560463 ANKRD33BA6NCL7 494 aa7.87□□□□□ -1.15
TRAF3-209ENST00000560463 SLC16A6O15403 523 aa7.87□□□□□ -1.15
TRAF3-209ENST00000560463 HCRTR2O43614 444 aa7.87□□□□□ -1.15
TRAF3-209ENST00000560463 CDC40O60508 579 aaKnown RBP eCLIP7.87□□□□□ -1.15
TRAF3-209ENST00000560463 BCAS1O75363 584 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms