RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 ADAMTS16Q8TE57 1224 aa13.59□□□□□ -0.23
VPS18-202ENST00000558474 DUSP19Q8WTR2 217 aa13.59□□□□□ -0.23
VPS18-202ENST00000558474 SNRNP27Q8WVK2 155 aaKnown RBP13.59□□□□□ -0.23
VPS18-202ENST00000558474 DNAJA4Q8WW22 397 aaPredicted RBP13.59□□□□□ -0.23
VPS18-202ENST00000558474 C9orf16Q9BUW7 83 aa13.59□□□□□ -0.23
VPS18-202ENST00000558474 FNDC11Q9BVV2 318 aa13.59□□□□□ -0.23
VPS18-202ENST00000558474 NMNAT1Q9HAN9 279 aaPredicted RBP13.59□□□□□ -0.23
VPS18-202ENST00000558474 NTN4Q9HB63 628 aa13.59□□□□□ -0.23
VPS18-202ENST00000558474 PPP4R1LQ9P1A2 415 aa13.59□□□□□ -0.23
VPS18-202ENST00000558474 CARD8Q9Y2G2 431 aa13.59□□□□□ -0.23
VPS18-202ENST00000558474 PCDHGB7Q9Y5F8 929 aa13.59□□□□□ -0.23
VPS18-202ENST00000558474 PCDHGB6Q9Y5F9 930 aa13.59□□□□□ -0.23
VPS18-202ENST00000558474 PCDHGA9Q9Y5G4 932 aaKnown RBP13.59□□□□□ -0.23
VPS18-202ENST00000558474 OR5H15A6NDH6 313 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 ARRDC5A6NEK1 342 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 ANKUB1A6NFN9 424 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 TNFRSF11BO00300 401 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 FFAR1O14842 300 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 FRS3O43559 492 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 PEX1O43933 1283 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 BCAS1O75363 584 aaPredicted RBP13.58□□□□□ -0.24
VPS18-202ENST00000558474 CYP7B1O75881 506 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 WDPCPO95876 746 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 GKN3PP0CG01 181 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 CCL3P10147 92 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 CNR1P21554 472 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 ELAVL4P26378 380 aaKnown RBP13.58□□□□□ -0.24
VPS18-202ENST00000558474 LIMS1P48059 325 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 CCL11P51671 97 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 DLX5P56178 289 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 SPIBQ01892 262 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 OC90Q02509 493 aaPredicted RBP13.58□□□□□ -0.24
VPS18-202ENST00000558474 TRAM2Q15035 370 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 OR1Q1Q15612 314 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 OGFRL1Q5TC84 451 aaPredicted RBP13.58□□□□□ -0.24
VPS18-202ENST00000558474 ULK3Q6PHR2 472 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 SHQ1Q6PI26 577 aaKnown RBP13.58□□□□□ -0.24
VPS18-202ENST00000558474 CBLN3Q6UW01 205 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 PACS2Q86VP3 889 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 ZDHHC13Q8IUH4 622 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 PACRGLQ8N7B6 248 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 PSD4Q8NDX1 1056 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 FDCSPQ8NFU4 85 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 TMEM234Q8WY98 164 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 TM9SF4Q92544 642 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 SDCCAG3Q96C92 435 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 MPP4Q96JB8 637 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 SMAD5Q99717 465 aaKnown RBP13.58□□□□□ -0.24
VPS18-202ENST00000558474 PSD2Q9BQI7 771 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 RTN4RQ9BZR6 473 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 ACER3Q9NUN7 267 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 RPS6KB2Q9UBS0 482 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 SAMHD1Q9Y3Z3 626 aaKnown RBP13.58□□□□□ -0.24
VPS18-202ENST00000558474 LYVE1Q9Y5Y7 322 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 AKAP13Q12802 2813 aa13.58□□□□□ -0.24
VPS18-202ENST00000558474 A0A0B4J2E0 115 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 A0A1B0GX12 115 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 HTR3EA5X5Y0 456 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 A6NL46 340 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 CPSF4LA6NMK7 179 aaKnown RBP13.57□□□□□ -0.24
VPS18-202ENST00000558474 G3V2T6 193 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 J3KTA2 159 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 SNPHO15079 494 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 CHP2O43745 196 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 E2F6O75461 281 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 NEURL1O76050 574 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 DIRAS1O95057 198 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 PRG2P13727 222 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 HTR2AP28223 471 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 HTR3AP46098 478 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 CDH12P55289 794 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 PIN1Q13526 163 aaPredicted RBP13.57□□□□□ -0.24
VPS18-202ENST00000558474 GANABQ14697 944 aaKnown RBP13.57□□□□□ -0.24
VPS18-202ENST00000558474 OR1C1Q15619 314 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 TRIP10Q15642 601 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 COL28A1Q2UY09 1125 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 UNQ6494/PRO21346Q6UXR6 183 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 LINC00696Q6ZRV3 163 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 ZNF227Q86WZ6 799 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 PLCZ1Q86YW0 608 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 TMCO5AQ8N6Q1 288 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 FADS6Q8N9I5 356 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 GATSQ8NAP1 163 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 MDS2Q8NDY4 140 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 OR4C15Q8NGM1 316 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 GPR119Q8TDV5 335 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 ST8SIA1Q92185 356 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 EME1Q96AY2 570 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 SLC41A3Q96GZ6 507 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 HS6ST2Q96MM7 605 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 SEMA6AQ9H2E6 1030 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 VCXQ9H320 206 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 PTGES2Q9H7Z7 377 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 PROK2Q9HC23 129 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 GALNT9Q9HCQ5 603 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 SELENONQ9NZV5 590 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 TMCC3Q9ULS5 477 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 TESMINQ9Y4I5 508 aa13.57□□□□□ -0.24
VPS18-202ENST00000558474 SPTBN4Q9H254 2564 aa13.56□□□□□ -0.24
VPS18-202ENST00000558474 A0A087WZY1 265 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms