RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 OR7E24Q6IFN5 339 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 APOOLQ6UXV4 268 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 RINLQ6ZS11 566 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 GALNT5Q7Z7M9 940 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 CTAGE4Q8IX94 777 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 KLHL7Q8IXQ5 586 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 UBE2J2Q8N2K1 259 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 ZNF433Q8N7K0 673 aaPredicted RBP4.56□□□□□ -1.68
SPG11-208ENST00000558155 LINC01356Q8N9X3 169 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 OR4F6Q8NGB9 312 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 CEP70Q8NHQ1 597 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 B4GALNT2Q8NHY0 566 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 GPR151Q8TDV0 419 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 ZNF418Q8TF45 676 aaPredicted RBP4.56□□□□□ -1.68
SPG11-208ENST00000558155 FAM216AQ8WUB2 273 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 FBXO17Q96EF6 278 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 PHF21BQ96EK2 531 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 VRK1Q99986 396 aaPredicted RBP4.56□□□□□ -1.68
SPG11-208ENST00000558155 LMF2Q9BU23 707 aaKnown RBP4.56□□□□□ -1.68
SPG11-208ENST00000558155 TRIM31Q9BZY9 425 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 BCO1Q9HAY6 547 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 FARSBQ9NSD9 589 aaKnown RBP4.56□□□□□ -1.68
SPG11-208ENST00000558155 NPAP1Q9NZP6 1156 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 NTMQ9P121 344 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 DMGDHQ9UI17 866 aaKnown RBP4.56□□□□□ -1.68
SPG11-208ENST00000558155 PRSS50Q9UI38 385 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 GRID1Q9ULK0 1009 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 ANK3Q12955 4377 aaKnown RBP4.56□□□□□ -1.68
SPG11-208ENST00000558155 A0A096LPK6 155 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 NPIPA5A0A0B4J1W7 369 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 A0A0G2JK05 382 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 GXYLT2A0PJZ3 443 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 SERINC4A6NH21 518 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 VSTM5A8MXK1 200 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 MYO1GB0I1T2 1018 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 FAM157AC9JC47 383 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 C9JVG2 144 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 NPIPA7E9PJI5 369 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 STX16-NPEPL1H3BU86 382 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 KIF2AO00139 706 aaPredicted RBP4.55□□□□□ -1.68
SPG11-208ENST00000558155 UPK1AO00322 258 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 SCDO00767 359 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 STX16O14662 325 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 PCDH7O60245 1069 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 SMIM24O75264 130 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 ULK1O75385 1050 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 RAD51DO75771 328 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 LY6HO94772 140 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 SNUPNO95149 360 aaKnown RBP4.55□□□□□ -1.68
SPG11-208ENST00000558155 OXSR1O95747 527 aaPredicted RBP4.55□□□□□ -1.68
SPG11-208ENST00000558155 HSPA4LO95757 839 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 OTCP00480 354 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 KRT6AP02538 564 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 KRT6BP04259 564 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 JUNP05412 331 aaKnown RBP4.55□□□□□ -1.68
SPG11-208ENST00000558155 C2P06681 752 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 NGFRP08138 427 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 LINGO3P0C6S8 592 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 NPIPA8P0DM63 369 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 PRPS2P11908 318 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 HSD3B1P14060 373 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 HSD3B2P26439 372 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 ELK4P28324 431 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 TYK2P29597 1187 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 KRT6CP48668 564 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 SNRPD2P62316 118 aaKnown RBP4.55□□□□□ -1.68
SPG11-208ENST00000558155 PHC1P78364 1004 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 ACSM2AQ08AH3 577 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 C2orf80Q0P641 193 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 TRAF3Q13114 568 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 NAB1Q13506 487 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 MLC1Q15049 377 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 PDCD2Q16342 344 aaPredicted RBP4.55□□□□□ -1.68
SPG11-208ENST00000558155 SWI5Q1ZZU3 235 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 MST1LQ2TV78 715 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 SPIN4Q56A73 249 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 MROH9Q5TGP6 573 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 FBXW9Q5XUX1 488 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 ACSM2BQ68CK6 577 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 TMEM107Q6UX40 140 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 DEF8Q6ZN54 512 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 CENPLQ8N0S6 344 aaPredicted RBP4.55□□□□□ -1.68
SPG11-208ENST00000558155 PTGR2Q8N8N7 351 aaPredicted RBP4.55□□□□□ -1.68
SPG11-208ENST00000558155 ATP6V1C2Q8NEY4 427 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 OR6Y1Q8NGX8 325 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 OR4C3Q8NH37 302 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 OR52N5Q8NH56 324 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 FBXO27Q8NI29 283 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 POC1BQ8TC44 478 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 C16orf78Q8WTQ4 265 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 ELP4Q96EB1 424 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 SH3YL1Q96HL8 342 aaPredicted RBP4.55□□□□□ -1.68
SPG11-208ENST00000558155 MUS81Q96NY9 551 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 JMJD8Q96S16 334 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 NPAS1Q99742 590 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 RBM4Q9BWF3 364 aaKnown RBP4.55□□□□□ -1.68
SPG11-208ENST00000558155 C1QTNF6Q9BXI9 259 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 SRXN1Q9BYN0 137 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 IQCGQ9H095 443 aaKnown RBP4.55□□□□□ -1.68
SPG11-208ENST00000558155 RAB1BQ9H0U4 201 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms